BAC Information

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BAC

Clone NameB6Ng01-138I10
Chromosome4 (Build37)
Map Location 149,244,919 - 149,245,812
singlet/doubletsinglet
Overlap genenone
Upstream geneCasz1, Pex14, LOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33
Downstream geneSpsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6, LOC100041882, Eno1, LOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138I10.bB6Ng01-138I10.g
ACCDH937763DH937764
length1,153883
definitionDH937763|Mus musculus domesticus DNA, BAC clone: B6Ng01-138I10, 5' end.DH937764|Mus musculus domesticus DNA, BAC clone: B6Ng01-138I10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggccagagctacatggtgagaccctggttttttttttttttt
tttttttttttttttttttttttccgaaacagggtttggcctccaactca
aaaatccccctgcctctgcctcccgagtgctgggattaaaggggtatgcc
ccccctgcccagcagcagtggaatttttaaactgggtttaaggggccatc
ccagcaaaaccatgggaaacagtggtgctgagggtgattaaaactgtagg
gcctggctcaagaggtttccgaggcgaggaatgatagcgtgtggcctaaa
gcttccccccttgtctgaactcttaggaaaatcattttgatgaaatgttc
ttcaaattagccatggggcctctcccctttatctcaacactcgggaggca
aaggcaaaggcaggcatgtctctgtgagttcaaggccagcctggtttaca
aaaagcgagttccaggacaggggggactgttacccaggcaaaccctgtct
caaaaaaaagagaggcagaaacagaaacagagacagaaactgagaacaag
acagagagtaaagagaaagaaagaaaatggtggttcagggattaaaggga
caacaggaagtggaagagagctaaatcctttttttcaaggagataaacag
attaaagatattaaatggggggctggagagatggctcagcagttaagagc
attggtctgcttcttccaaagggtctgaattccattcccagcaaccactg
ggggctcacaaccatctgtagggggatccaaaggtcctcttcaggtgtct
gaagaagagcaccagtgtattccacagacataataataatttttttttaa
aaatagaactctttaatggaaattaaaggagatggatgacctccgggaaa
aactccatgcaactaagcttctatccctgtgaaaaggaaattaaaaaacc
ttgttaatgcacatggttaccgggctttagtccagccctcccaaaaaaca
gagccagcaatatttctttatttaaggctacctggtcacagaagaaccta
ccagctctaggaggaaggaactactcaagcaaaagcttgtgataattcct
tgaacaaggggctcatgttcacgccccaacagctgcgtaccgccgctttg
tta
gaattcatctctgttaatccacacccaaggcgagagcctacctggttggt
tggttgattgattgattgattgattgatgattgatttttttttctgagac
actttcatgtatctcaggagaaggctggccttgagctgagtatgtggcag
aggtcagccttgaacctctgatccttctgtccccacctcccaaatactgg
gattacccactggggaagcactctgacaactgaactgtatctgcaccccc
cccccgactctgacttatgacccaaactgtttcctgcagctgggaggagg
aggggggcaaagtcaccccagctgagagccgccatcgtgttcaggaaagg
aagatcaggggacagcgcagtctggagcggatgccctgaggatgcaggct
gaggaaggggctctgtggagctatagccacagctggctctgatgctgtgt
gaaccacaaggcttggcgaagagtggaagggctcagggaacagctggagc
agacatagcacactcacttaattacgggccttcacccctgaactctgggc
ttttcctggaatggccgtcataaggctgtgcacccgggcaaggcctggag
ccgtgggcctgttttcggagacacccatttcctcctccacgggagtcagg
tccaaatgtattggatgttccccccaactagagcaaaactctccaagagg
gaagaacattggtttgagttttctgggctttttggttgtttattgtttga
ggtttttttggtttttagttttgtttagtttttttttttttttaattaag
attgtctcatttatatgtatagtgttttgttagcctgatgtacaacatca
catagatggactcgtgctcaagagggcaggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149244919_149245812
seq2: B6Ng01-138I10.g_69_951 (reverse)

seq1  ACCCCATGCCCTCTTGAAGCACGAGT-CATCTATGTGATGTATGTACATA  49
      ||||| |||||||||| ||||||||| |||||||||||||| ||||||| 
seq2  ACCCC-TGCCCTCTTG-AGCACGAGTCCATCTATGTGATGT-TGTACAT-  46

seq1  CAGGCAAACAAAACACTTATACATATAAAATGAGACAAATCTTTAAATAA  99
      ||||| |||||||||| ||||||||| ||||||||| ||||||  ||| |
seq2  CAGGCTAACAAAACAC-TATACATAT-AAATGAGAC-AATCTT--AATTA  91

seq1  AAAAAAAAAAAAAACTAAAACAAAAACTAAAAACCAAAAAAACCTTCAAA  149
      |||||||||||||||||||   |||||||||||||||||||||| |||||
seq2  AAAAAAAAAAAAAACTAAA--CAAAACTAAAAACCAAAAAAACC-TCAAA  138

seq1  CAAATAAACAACCAAAAAGCCCAGAAAACTCAAACCAATGTTCTTCCCTC  199
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-AATAAACAACCAAAAAGCCCAGAAAACTCAAACCAATGTTCTTCCCTC  187

seq1  TTGGAGAGTTTTGCTCTAGTTGGGGGGAACATCCAATACATTTGGACCTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAGTTTTGCTCTAGTTGGGGGGAACATCCAATACATTTGGACCTG  237

seq1  ACTCCCGTGGAGGAGGAAATGGGTGTCTCCG-AAACAGGCCCACGGCTCC  298
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACTCCCGTGGAGGAGGAAATGGGTGTCTCCGAAAACAGGCCCACGGCTCC  287

seq1  AGGCCTTGCCCGGGTGCACAGCCTTATGACGGCCATTCCAGGAAAAGCCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTGCCCGGGTGCACAGCCTTATGACGGCCATTCCAGGAAAAGCCC  337

seq1  AGAGTTCAGGGGTGAAGGCCCGTAATTAAGTGAGTGTGCTATGTCTGCTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTCAGGGGTGAAGGCCCGTAATTAAGTGAGTGTGCTATGTCTGCTC  387

seq1  CAGCTGTTCCCTGAGCCCTTCCACTCTTCGCCAAGCCTTGTGGTTCACAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTTCCCTGAGCCCTTCCACTCTTCGCCAAGCCTTGTGGTTCACAC  437

seq1  AGCATCAGAGCCAGCTGTGGCTATAGCTCCACAGAGCCCCTTCCTCAGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCAGAGCCAGCTGTGGCTATAGCTCCACAGAGCCCCTTCCTCAGCC  487

seq1  TGCATCCTCAGGGCATCCGCTCCAGACTGCGCTGTCCCCTGATCTTCCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCTCAGGGCATCCGCTCCAGACTGCGCTGTCCCCTGATCTTCCTT  537

seq1  TCCTGAACACGATGGCGGCTCTCAGCTGGGGTGACTTTGCCCCCCTCCTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGAACACGATGGCGGCTCTCAGCTGGGGTGACTTTGCCCCCCTCCTC  587

seq1  CTCCCAGCTGCAGGAAACAGTTTGGGTCATAAGTCAGAGTCGGGGGGGGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCAGCTGCAGGAAACAGTTTGGGTCATAAGTCAGAGTCGGGGGGGGG  637

seq1  GTGCAGATACAGTTCAGTTGTCAGAGTGCTTCCCCAGTGGGTAATCCCAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGATACAGTTCAGTTGTCAGAGTGCTTCCCCAGTGGGTAATCCCAG  687

seq1  TATTTGGGAGGTGGGGACAGAAGGATCAGAGGTTCAAGGCTGACCTCTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGGGAGGTGGGGACAGAAGGATCAGAGGTTCAAGGCTGACCTCTGC  737

seq1  CACATACTCAGCTCAAGGCCAGCCTTCTCCTGAGATACATGAAAGTGTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTCAGCTCAAGGCCAGCCTTCTCCTGAGATACATGAAAGTGTCT  787

seq1  CAGAAAAAAAAATCAATCATCAATCAATCAATCAATCAATCAACCAACCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAAAAATCAATCATCAATCAATCAATCAATCAATCAACCAACCA  837

seq1  ACCAGGTAGGCTCTCGCCTTGGGTGTGGATTAACAGAGATGAATTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGTAGGCTCTCGCCTTGGGTGTGGATTAACAGAGATGAATTC  883