BAC Information

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BAC

Clone NameB6Ng01-150K19
Chromosome4 (Build37)
Map Location 4,664,851 - 4,665,366
singlet/doubletsinglet
Overlap genenone
Upstream geneLyn, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019
Downstream geneImpad1, LOC100039338, 1700012H17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150K19.bB6Ng01-150K19.g
ACCDH946695DH946696
length1,2271,101
definitionDH946695|Mus musculus domesticus DNA, BAC clone: B6Ng01-150K19, 5' end.DH946696|Mus musculus domesticus DNA, BAC clone: B6Ng01-150K19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggggcaccccaagctgccttgagcagtatgctattccccagtg
aacatcaatttttctatcacctctttatccatgatcatcattgctgtgga
tgctgagccatacaggttagcttccttccctcacccatcgactgtgatca
ctaacttatctagggcaccccaagctgcctgggcggcctgctatcctctc
tggacctccattcaatccccctccttactccgagcttcatcagacttgtg
gagcttgaactataaaagttagttcccctttatccacatatattccctcc
ttactaagaactctggggcacccaaagctgccttgggcaatctgctatca
ccagtgaacatgattctcctgccagttctctgcccaccttcatcagtccc
atgaattttgaaccatacagaactgagacttctgaataataaagacctag
tgataggaaaccatatagcctaaggacattcaccagagacctgccacacc
aggactactgacagtaaccttcatctcaatgcctaatacaatggaaacat
acagggacaaaagccatccagatggctaaaggccctcaaaagaacataat
caacaaaacctgtggcagtaagaaaccttgagagcccagttaccctacaa
gaacaagccctggatatcctaacacaatcaaagcacaagaaagtaatctt
aaatcctctcttataaagatgatagaggcctttataaagtgaaagaatcc
tttaaagaaatacaggaaaatacaatcaaacagaggcctttaaagaggaa
aaaacccttaagatatcaataaaactgtgcaagacctgaaagtgaaaaca
gaagcaataaagaaaacacacactgagggaatcctagagatggaaaacct
agagaagagagcagatagcagatgcaaacacaccacgatacaaaaaaaaa
aaaaaaagaaaaaaaaaaagagaagagagaagaagggaaatctccagtgc
agaagatacatagatgaatgatacaccagtcaagaaaatgtaaatcctaa
atttcctgaaggaaacttccaggaaatatggttactaaacagcataacta
gaataataggaacgaagaaacataaagattctcagcaccagaaattcttt
ccgcaaatctagaagaaagttaccacctaagaaggaccttcatagacctt
gaatataaatgactgccagaggtaaat
gaattcaagtactatgttgaataggtagggagaaagtgggcagccttgtc
tagtccctcattttagtgggattgcttcaagcttctcaccatttactttg
atgttggctactggtttgctgtagattacttttatcatgtttaggtatgg
gccttgaattcctgatctttccaagacttttttcatcaatgggtgttgga
tctttttgaatgctttctctgcatctaacgagatgatcatgtggtttttg
tctttgagtttgtttatataatggattacattgatggattttcgtatatt
aaaccatccctgcatccctggaataaaacctacttggtcaggatggatga
ttgttttaatgtgttcttggattcggttagcgagaattttattgagtatt
tttgcatcaatattcataaggcaaattggtctgaagttctgcatctttgt
tggatctttctgtggtttaggtatcagagtaattgtggcttcatagaatg
agttgggtagagttccctctacttctattttgtggaatagtttgtgcaga
actggaattagatcttctttgaaggtctggtagaactctgccctaaaccc
atctggtcctgggctttttttggctgggagactattaatgactgcttcta
tttctttaggggatatgggactgtttagattgttaacttgatcctgattt
aactttggtatctggtatctgtctagaaatttgtccattttgttcaggtt
ttccagttttgttgagtatagccttttgtagaaggatctgatggtgtttt
ggatttcttcaggatctgttgttatgtcttcctttcatttctgattttat
tcattaggatgttgtccctgtgccctctagtgagtctagctaaggcttta
tctatctgttgattttctcaaagaaccacctccttgtttgataattcttt
gatagtctacttgtttccacttgtgatttcacccctgagttgatatttcc
tgctgtctactctctggtgaatattctccttttttttctagagcttagag
tgtgcaagctggctaggggtggctctctcagttctttttggaggcactca
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_4664851_4665366
seq2: B6Ng01-150K19.g_672_1167 (reverse)

seq1  CTGAGTGCCTCCAAAAAGAAACTAGAGAGAGCACACACTAG-CAGCTTGA  49
      |||||||||||||||||| |||| ||||||||   | |||| ||||||| 
seq2  CTGAGTGCCTCCAAAAAG-AACT-GAGAGAGCCACCCCTAGCCAGCTTG-  47

seq1  CAACACACCTAAAAGCCCTAGAAAAAAAGGAAGAAAATTCACCCAAGAGG  99
         |||| ||  |||| ||||||||||| | |||| |||||||  ||| |
seq2  ---CACA-CTCTAAGCTCTAGAAAAAAAAGGAGAATATTCACC--AGA-G  90

seq1  AGTAGACAGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGA  149
      ||||||||||||||||| ||| ||||||||||||||||||  ||||||||
seq2  AGTAGACAGCAGGAAAT-ATC-AACTCAGGGGTGAAATCA--CAAGTGGA  136

seq1  AACAAGAAGAACTATTCAAAGAATTAACCAAACGAGGAGTTGGTTCTTTG  199
      |||||| || |||| |||||||||| | ||||| ||||| ||||||||||
seq2  AACAAGTAG-ACTA-TCAAAGAATT-ATCAAACAAGGAGGTGGTTCTTTG  183

seq1  AGAAAATCAACAAGATAGATAAGCCCTTAGCTAGACTCACTAGAGGGCAC  249
      ||||||||||| ||||||||||  ||||||||||||||||||||||||||
seq2  AGAAAATCAAC-AGATAGATAAAGCCTTAGCTAGACTCACTAGAGGGCAC  232

seq1  AGGGTCAGCATCCTAATTAACAAAATCAAAAATGAAAAGGGAGACATAAC  299
      |||| || ||||||||| || ||||||| ||||| ||||| |||||||||
seq2  AGGGACAACATCCTAATGAATAAAATCAGAAATG-AAAGGAAGACATAAC  281

seq1  AACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCAACAAAAGGC  349
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTACAAAAGGC  331

seq1  TATATTCAACAAAACTGGAAAACCTGGATGAAATGGACAAATTTCTAGAC  399
      |||| ||||||||||||||||||||| |  ||||||||||||||||||||
seq2  TATACTCAACAAAACTGGAAAACCTGAACAAAATGGACAAATTTCTAGAC  381

seq1  AAATACCAGGTAACAAAGTTAAATCCAGTTCAGGTTAATGATCTAAGCAG  449
      | ||||||| || ||||||||||||  | ||| |||||  |||||| |||
seq2  AGATACCAGATACCAAAGTTAAATCAGGATCAAGTTAACAATCTAAACAG  431

seq1  TCCTATATCCCCTAAAGAAATAGAAGCAGTCATTAATTGTCTCCCAACCA  499
      ||| ||||||||||||||||||||||||||||||||| |||||||| || 
seq2  TCCCATATCCCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAGCC-  480

seq1  AAAAAAAAGCCCAGGAC  516
       ||||||||||||||||
seq2  -AAAAAAAGCCCAGGAC  496