BAC Information

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BAC

Clone NameB6Ng01-150M13
Chromosome4 (Build37)
Map Location 152,428,602 - 152,553,607
singlet/doubletdoublet
Overlap genenone
Upstream geneNol9, EG666980, Plekhg5, Tnfrsf25, Espn, LOC100043284, Hes2, Acot7, Gpr153, Hes3, Icmt, Rnf207, Rpl22, Chd5, Kcnab2, LOC100042028, Nphp4, LOC667039, Gm833
Downstream geneLOC100042089, Ajap1, BC039966, A430005L14Rik, Dffb, BC046331, Lrrc47, 1190007F08Rik, Ccdc27, Trp73, Wdr8, 1200015A19Rik, Megf6
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150M13.bB6Ng01-150M13.g
ACCDH946772DH946773
length442776
definitionDH946772|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M13, 5' end.DH946773|Mus musculus domesticus DNA, BAC clone: B6Ng01-150M13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(152,553,160 - 152,553,607)(152,428,602 - 152,429,373)
sequence
agacatgtaaaactgatatcccaggagcttgaagagatcctggccacttt
ctgccccaaagcacacatgcatttagagcaggcttgtccaaccctcgcct
cacaggccaggcgaggctgaagaaagctaagaatgagccctgacacaaaa
ctgcaactgtacagcattggaagacttctttttcttgttgctgttattat
tattataattattattattttgttttaaatttcaattgtgaagttccgga
ttgtgaactccgtaagcggcaacaccctgtcacggtgtcaagactggata
ttcctgatggaaaaagggccctcacaagagtgatttagttgagcgaggtc
caggtcattgggtaggacctacctaatcctaagtggcagagtctctacaa
ggaagggactagagcagctggggatggggatgggggatgggg
gaattcccccctcagtttggtctgtgggtataatggtggggcattttctt
gattgataacagatgtgggagagccccacctactttgtgcactgccagac
ctgggcaagttggtcctggtttgtctaagaaagcaagttgagtaaaccat
gaggagcaaatcagcaagcaatattctttcgtggcctcagcctgggttcc
tgccttgaattcatgctgtgacttccttcagtgttggagtacatgatatg
agagttgtaagaagaaaaaccgctttccaccataagtcgcttttggacag
tgtttatcacagcaaccatagaaaaactagaacaacatgtgaactgctat
tggacggtattgcttatggaatgatgacaggaaaatttgtctaagtggct
ggtatggttgcattgggtgggggtgggaacctgcagatgcagagagccaa
tggccgtatcagtgtggtcctagatggaagagctcaggtgtgctatggag
cctgtactcacctacacaccccttctctgtctgtctgtctgtctgtctgt
ctgtctctgtgtctgtgtctgtgtctctctctgtgtgtcactcattctct
ctgtttctgtctccgtgtctctgtcactttgtgtgtgtgtgtgtgtgtgc
atgtgtgtgtgcaatgtctattttgttagtgtccgtgtgtagatgcacat
gcccgtggaagccttcaagtcaacactggggtgtctattatcaattactt
cccatctcaacatatttttaattgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_152553160_152553607
seq2: B6Ng01-150M13.b_45_492 (reverse)

seq1  CCCCATCCCCCATCCCCATCCCCAGCTGCTCTAGTCCCTTCCTTGTAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATCCCCCATCCCCATCCCCAGCTGCTCTAGTCCCTTCCTTGTAGAG  50

seq1  ACTCTGCCACTTAGGATTAGGTAGGTCCTACCCAATGACCTGGACCTCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGCCACTTAGGATTAGGTAGGTCCTACCCAATGACCTGGACCTCGC  100

seq1  TCAACTAAATCACTCTTGTGAGGGCCCTTTTTCCATCAGGAATATCCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTAAATCACTCTTGTGAGGGCCCTTTTTCCATCAGGAATATCCAGT  150

seq1  CTTGACACCGTGACAGGGTGTTGCCGCTTACGGAGTTCACAATCCGGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACACCGTGACAGGGTGTTGCCGCTTACGGAGTTCACAATCCGGAAC  200

seq1  TTCACAATTGAAATTTAAAACAAAATAATAATAATTATAATAATAATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATTGAAATTTAAAACAAAATAATAATAATTATAATAATAATAAC  250

seq1  AGCAACAAGAAAAAGAAGTCTTCCAATGCTGTACAGTTGCAGTTTTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAAGAAAAAGAAGTCTTCCAATGCTGTACAGTTGCAGTTTTGTGT  300

seq1  CAGGGCTCATTCTTAGCTTTCTTCAGCCTCGCCTGGCCTGTGAGGCGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTCATTCTTAGCTTTCTTCAGCCTCGCCTGGCCTGTGAGGCGAGG  350

seq1  GTTGGACAAGCCTGCTCTAAATGCATGTGTGCTTTGGGGCAGAAAGTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGACAAGCCTGCTCTAAATGCATGTGTGCTTTGGGGCAGAAAGTGGC  400

seq1  CAGGATCTCTTCAAGCTCCTGGGATATCAGTTTTACATGTCTGAATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCTCTTCAAGCTCCTGGGATATCAGTTTTACATGTCTGAATTC  448

seq1: chr4_152428602_152429373
seq2: B6Ng01-150M13.g_67_842

seq1  GAATTCCCCCCTCAGTTTGGTCTGTGGGTATAATGGTGGGGCATTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCCTCAGTTTGGTCTGTGGGTATAATGGTGGGGCATTTTCTT  50

seq1  GATTGATAACAGATGTGGGAGAGCCCCACCTACTTTGTGCACTGCCAGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGATAACAGATGTGGGAGAGCCCCACCTACTTTGTGCACTGCCAGAC  100

seq1  CTGGGCAAGTTGGTCCTGGTTTGTCTAAGAAAGCAAGTTGAGTAAACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAAGTTGGTCCTGGTTTGTCTAAGAAAGCAAGTTGAGTAAACCAT  150

seq1  GAGGAGCAAATCAGCAAGCAATATTCTTTCGTGGCCTCAGCCTGGGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAGCAAATCAGCAAGCAATATTCTTTCGTGGCCTCAGCCTGGGTTCC  200

seq1  TGCCTTGAATTCATGCTGTGACTTCCTTCAGTGTTGGAGTACATGATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGAATTCATGCTGTGACTTCCTTCAGTGTTGGAGTACATGATATG  250

seq1  AGAGTTGTAAGAAGAAAAACCGCTTTCCACCATAAGTCGCTTTTGGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTGTAAGAAGAAAAACCGCTTTCCACCATAAGTCGCTTTTGGACAG  300

seq1  TGTTTATCACAGCAACCATAGAAAAACTAGAACAACATGTGAACTGCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCACAGCAACCATAGAAAAACTAGAACAACATGTGAACTGCTAT  350

seq1  TGGACGGTATTGCTTATGGAATGATGACAGGAAAATTTGTCTAAGTGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACGGTATTGCTTATGGAATGATGACAGGAAAATTTGTCTAAGTGGCT  400

seq1  GGTATGGTTGCATTGGGTGGGGGTGGGAACCTGCAGATGCAGAGAGCCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGGTTGCATTGGGTGGGGGTGGGAACCTGCAGATGCAGAGAGCCAA  450

seq1  TGGCCGTATCAGTGTGGTCCTAGATGGAAGAGCTCAGGTGTGCTATGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGTATCAGTGTGGTCCTAGATGGAAGAGCTCAGGTGTGCTATGGAG  500

seq1  CCTGTACTCACCTACACACCCCTTCTCTGTCTGTCTGTCTGTCTGTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTACTCACCTACACACCCCTTCTCTGTCTGTCTGTCTGTCTGTCTGT  550

seq1  CTGTCTCTGTGTCTGTGTCTGTGTCTCTCTCTGTGTGTCACTCATTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGTGTCTGTGTCTGTGTCTCTCTCTGTGTGTCACTCATTCTCT  600

seq1  CTGTTTCTGTCTCCGTGTCTCTGTCACTTTGTGTGTGTGTGTGTGTGTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCTGTCTCCGTGTCTCTGTCACTTTGTGTGTGTGTGTGTGTGTGC  650

seq1  ATGTGTGTGTGCAATGTCTA-TTTGTTAGTGT-CGTGTGTAGATGCACAT  698
      |||||||||||||||||||| ||||||||||| |||||||||||||||||
seq2  ATGTGTGTGTGCAATGTCTATTTTGTTAGTGTCCGTGTGTAGATGCACAT  700

seq1  GCCCGTGGAAGCC-TCAGGTCAACACT-GGGTGTCTATTATCAATTACTC  746
      ||||||||||||| ||| ||||||||| ||||||||||||||||||||| 
seq2  GCCCGTGGAAGCCTTCAAGTCAACACTGGGGTGTCTATTATCAATTACTT  750

seq1  CCCATCTCAACATATTTTTAATTGTT  772
      ||||||||||||||||||||||||||
seq2  CCCATCTCAACATATTTTTAATTGTT  776