BAC Information

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BAC

Clone NameB6Ng01-152P14
Chromosome4 (Build37)
Map Location 109,444,329 - 109,596,360
singlet/doubletdoublet
Overlap geneFaf1
Upstream gene3110021N24Rik, Btf3l4, Txndc12, Kti12, Rab3b, Nrd1, Osbpl9, Calr4, Eps15, LOC666144, 4922503N01Rik, Rnf11, 4930522H14Rik, Cdkn2c, LOC100040307
Downstream geneDmrta2, Elavl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-152P14.bB6Ng01-152P14.g
ACCDH948415DH948416
length1,1841,011
definitionDH948415|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P14, 5' end.DH948416|Mus musculus domesticus DNA, BAC clone: B6Ng01-152P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,444,329 - 109,445,516)(109,595,676 - 109,596,360)
sequence
gaattcttttatcttatttttctcttatcttgccatggcatctatgagat
tatagtcatgatcttcagtaggctctgggaatccaaactcaagtccacac
acctacagaacatcactttacctgctgagccatcttcccagctcctaaaa
tacattttaattctacctttaagtcattgcaattttaattttttttctaa
gacatcctctatatctataattgtgtgtgttttagtaaactgttttctga
caattctgtgtgatatctattgtcatctaaatttaaaataatttataatt
taaaaaaattttgaaaagataaacatgtttaaatcttaacaccgaagtgt
taagtactacagatagcaagctactttgaaattgtgttttgtgttttata
tacaatatttacagttgaccagactattggaaatccctgtccaaaaacca
aatatctaatatgtattaaatatgtaattaatctacaatctactatcata
agcagagttaaatacacatcaatgagcaacataatttttaagtttattgt
cttcttatttcagtcattagattgaatactttcttggaaagattaagaca
gaaaatattgggcatgccttttccttagttttattgaaagaacaaaaaca
tccacacagttctaattaaggacaagtgtactctttttcttgaggtgtat
ctttggtaatcagctactggattttactctgaaataggcttcagggaatt
tgatctaatacagttgctaaagctatttaattcaaaaattgtgaacaagt
aacttcatttgataaatacttgactgtttgatggaaaagtcaagcaattg
aaactcatcagataaaacagaagattcctaattggttaaaaatttaaatg
tactaaaatattaattgtttaggatgcgtatatgaggctattattgaatc
atatgcagagatactgtcttagttagggttttattgctggtgaacagacc
ccatgaccaagctgcttacaggttagaggttaaatcccttatcatcaagt
gggagcatggcagtatctattcaggcatggtgcaagcagagctgaagagt
tctacatctttcttctcaaggctgctagtgggaagactgacttcaggcca
cctgggggtgaagagattaagcccaaccccacag
gaattctttatggcattctaaatatttatccttatacctcagttcacatt
aaagaaacttgtctttgctgcaaatgaggaccgttaatacagctgttttc
tgttaacatcaggaagagggcaggttatctacttagctcacttgattcac
tacggaactagcatttctagccagtccagtaacagctcttctcccctaca
gaaatctctgctctatattctgtctgtgtggtttcttgcttacctatgta
aacagaaatatatggtatttatcctctcatagttatctttcattaatata
gtgtccttaaagtttgtttatattgtagtatcatttctttttataactga
attaattccatttgtgtgtgtgtatatgtatgtatttgtataccacattt
gtatgttcacctttctgtttgtggacacgaattttttccaccttctggat
attgtgaatactactataattacattggacatttatggatttatttaaag
atatctacctgacctttgccctttttcttatcaaatacatgatttgtaaa
tattaattacattttgtagatctgtcttttctccatggcatcttttggta
catggaagtattcttaatttttatgagcccttccttccttccttctttcc
tttttcaaatttttgagacaaggtctcactctgtaaccaaggctggccta
gagttcactcaacaaagacacatttgatggccacaggagtagtgtcaaga
ggcacacttcaggttatgaaagtagatttgtagattaagtttaaccctaa
cccctgggattttttttttaaagtttagtaatatagtgtaatatgtgtat
atcaggagtgcctcaacaggtattacctctaattctccaagttcagagtt
tgcttttactaggacaggtgaaaggttcatagaaaatctatagaaaagat
aaggccaataatacccatgttacaaatactgtaacacacaagagacataa
tgatttggtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_109444329_109445516
seq2: B6Ng01-152P14.b_48_1231

seq1  GAATTCTTTTATCTTATTTTTCTCTTATCTTGCCATGGCATCTATGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATCTTATTTTTCTCTTATCTTGCCATGGCATCTATGAGAT  50

seq1  TATAGTCATGATCTTCAGTAGGCTCTGGGAATCCAAACTCAAGTCCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCATGATCTTCAGTAGGCTCTGGGAATCCAAACTCAAGTCCACAC  100

seq1  ACCTACAGAACATCACTTTACCTGCTGAGCCATCTTCCCAGCTCCTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACAGAACATCACTTTACCTGCTGAGCCATCTTCCCAGCTCCTAAAA  150

seq1  TACATTTTAATTCTACCTTTAAGTCATTGCAATTTTAATTTTTTTTCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTAATTCTACCTTTAAGTCATTGCAATTTTAATTTTTTTTCTAA  200

seq1  GACATCCTCTATATCTATAATTGTGTGTGTTTTAGTAAACTGTTTTCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCCTCTATATCTATAATTGTGTGTGTTTTAGTAAACTGTTTTCTGA  250

seq1  CAATTCTGTGTGATATCTATTGTCATCTAAATTTAAAATAATTTATAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTGTGTGATATCTATTGTCATCTAAATTTAAAATAATTTATAATT  300

seq1  TAAAAAAATTTTGAAAAGATAAACATGTTTAAATCTTAACACCGAAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATTTTGAAAAGATAAACATGTTTAAATCTTAACACCGAAGTGT  350

seq1  TAAGTACTACAGATAGCAAGCTACTTTGAAATTGTGTTTTGTGTTTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACTACAGATAGCAAGCTACTTTGAAATTGTGTTTTGTGTTTTATA  400

seq1  TACAATATTTACAGTTGACCAGACTATTGGAAATCCCTGTCCAAAAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATATTTACAGTTGACCAGACTATTGGAAATCCCTGTCCAAAAACCA  450

seq1  AATATCTAATATGTATTAAATATGTAATTAATCTACAATCTACTATCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTAATATGTATTAAATATGTAATTAATCTACAATCTACTATCATA  500

seq1  AGCAGAGTTAAATACACATCAATGAGCAACATAATTTTTAAGTTTATTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGTTAAATACACATCAATGAGCAACATAATTTTTAAGTTTATTGT  550

seq1  CTTCTTATTTCAGTCATTAGATTGAATACTTTCTTGGAAAGATTAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTATTTCAGTCATTAGATTGAATACTTTCTTGGAAAGATTAAGACA  600

seq1  GAAAATATTGGGCATGCCTTTTCCTTAGTTTTATTGAAAGAACAAAAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATTGGGCATGCCTTTTCCTTAGTTTTATTGAAAGAACAAAAACA  650

seq1  TCCACACAGTTCTAATTAAGGACAAGTGTACTCTTTTTCTTGAGGTGTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACAGTTCTAATTAAGGACAAGTGTACTCTTTTTCTTGAGGTGTAT  700

seq1  CTTTGGTAATCAGCTACTGGATTTTACTCTGAAATAGGCTTCAGGGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTAATCAGCTACTGGATTTTACTCTGAAATAGGCTTCAGGGAATT  750

seq1  TGATCTAATACAGTTGCTAAAGCTATTTAATTCAAAAATTGTGAACAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTAATACAGTTGCTAAAGCTATTTAATTCAAAAATTGTGAACAAGT  800

seq1  AACTTCATTTGATAAATACTTGACTGTTTGATGGAAAAGTCAAGCAATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATTTGATAAATACTTGACTGTTTGATGGAAAAGTCAAGCAATTG  850

seq1  AAACTCATCAGATAAAACAGAAGATTCCTAATTGGGTTAAAAATTTAAAT  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AAACTCATCAGATAAAACAGAAGATTCCTAATT-GGTTAAAAATTTAAAT  899

seq1  GTACTAAAATATTAATTTGTTTTAGGATGCGTATATGAGGCTATTATTGA  950
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  GTACTAAAATATTAATT--GTTTAGGATGCGTATATGAGGCTATTATTGA  947

seq1  ATCATATGCAGAGAATAACTGTCTTAGTTAGGGTTTTATTGCT-GTGAAC  999
      ||||||||||||||   |||||||||||||||||||||||||| ||||||
seq2  ATCATATGCAGAGA--TACTGTCTTAGTTAGGGTTTTATTGCTGGTGAAC  995

seq1  AGACACCATGACCAAGGCTGGCTTACAGGTTCAGAGGTTAAGTCCCTTAT  1049
      |||| |||||||||| ||| ||||||||||| ||||||||| ||||||||
seq2  AGACCCCATGACCAA-GCT-GCTTACAGGTT-AGAGGTTAAATCCCTTAT  1042

seq1  CATCAAGGTGGGAGCATGGCAGTATCTATTCAGGCATGGTGCAGGCAGAG  1099
      |||||| |||||||||||||||||||||||||||||||||||| ||||||
seq2  CATCAA-GTGGGAGCATGGCAGTATCTATTCAGGCATGGTGCAAGCAGAG  1091

seq1  CTG-AGAGTTCTACATC-TTCATCCAAAGGCTGCTAGT-GGAAGACTGAC  1146
      ||| ||||||||||||| ||| ||  |||||||||||| |||||||||||
seq2  CTGAAGAGTTCTACATCTTTCTTCTCAAGGCTGCTAGTGGGAAGACTGAC  1141

seq1  TTCCAGGCAACT-GGGGTG-AGAGTATTAAGCCCACACCCACAG  1188
      |||  | || || |||||| |||| ||||||||||  |||||||
seq2  TTCAGGCCACCTGGGGGTGAAGAG-ATTAAGCCCAACCCCACAG  1184

seq1: chr4_109595676_109596360
seq2: B6Ng01-152P14.g_71_755 (reverse)

seq1  TACAGAGTGAGACCTTGTCTCAAAAATTTGAAAAAGGAAAGAAGGAAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGTGAGACCTTGTCTCAAAAATTTGAAAAAGGAAAGAAGGAAGGA  50

seq1  AGGAAGGGCTCATAAAAATTAAGAATACTTCCATGTACCAAAAGATGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGGCTCATAAAAATTAAGAATACTTCCATGTACCAAAAGATGCCA  100

seq1  TGGAGAAAAGACAGATCTACAAAATGTAATTAATATTTACAAATCATGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAAAAGACAGATCTACAAAATGTAATTAATATTTACAAATCATGTA  150

seq1  TTTGATAAGAAAAAGGGCAAAGGTCAGGTAGATATCTTTAAATAAATCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATAAGAAAAAGGGCAAAGGTCAGGTAGATATCTTTAAATAAATCCA  200

seq1  TAAATGTCCAATGTAATTATAGTAGTATTCACAATATCCAGAAGGTGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTCCAATGTAATTATAGTAGTATTCACAATATCCAGAAGGTGGAA  250

seq1  AAAATTCGTGTCCACAAACAGAAAGGTGAACATACAAATGTGGTATACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTCGTGTCCACAAACAGAAAGGTGAACATACAAATGTGGTATACAA  300

seq1  ATACATACATATACACACACACAAATGGAATTAATTCAGTTATAAAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATATACACACACACAAATGGAATTAATTCAGTTATAAAAAGA  350

seq1  AATGATACTACAATATAAACAAACTTTAAGGACACTATATTAATGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACTACAATATAAACAAACTTTAAGGACACTATATTAATGAAAGA  400

seq1  TAACTATGAGAGGATAAATACCATATATTTCTGTTTACATAGGTAAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATGAGAGGATAAATACCATATATTTCTGTTTACATAGGTAAGCAA  450

seq1  GAAACCACACAGACAGAATATAGAGCAGAGATTTCTGTAGGGGAGAAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCACACAGACAGAATATAGAGCAGAGATTTCTGTAGGGGAGAAGAG  500

seq1  CTGTTACTGGACTGGCTAGAAATGCTAGTTCCGTAGTGAATCAAGTGAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACTGGACTGGCTAGAAATGCTAGTTCCGTAGTGAATCAAGTGAGC  550

seq1  TAAGTAGATAACCTGCCCTCTTCCTGATGTTAACAGAAAACAGCTGTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAGATAACCTGCCCTCTTCCTGATGTTAACAGAAAACAGCTGTATT  600

seq1  AACGGTCCTCATTTGCAGCAAAGACAAGTTTCTTTAATGTGAACTGAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGTCCTCATTTGCAGCAAAGACAAGTTTCTTTAATGTGAACTGAGGT  650

seq1  ATAAGGATAAATATTTAGAATGCCATAAAGAATTC  685
      |||||||||||||||||||||||||||||||||||
seq2  ATAAGGATAAATATTTAGAATGCCATAAAGAATTC  685