BAC Information

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BAC

Clone NameB6Ng01-154P12
Chromosome4 (Build37)
Map Location 59,045,411 - 59,145,614
singlet/doubletdoublet
Overlap geneGng10, AI481877
Upstream geneSvep1, Musk, Edg2, LOC675306, LOC433711, Olfr267, AI314180, LOC100041581, Ltb4dh, 2010203O07Rik
Downstream geneLOC433712, Ugcg, LOC100041535, LOC634731, LOC666719, Rod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658, LOC620846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154P12.bB6Ng01-154P12.g
ACCDH949874DH949875
length8641,101
definitionDH949874|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P12, 5' end.DH949875|Mus musculus domesticus DNA, BAC clone: B6Ng01-154P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,144,752 - 59,145,614)(59,045,411 - 59,046,415)
sequence
gaattcaggacctctggaagagcaagtagccagtgctcttaaccgatgag
ccatctctccagcccctgttttgcttgttttgatgacaaaaatgaaaagt
gctttctttgtactacccttgagctcagatgcctagaaaatggcttctcc
catgcaggtctctggaatattcttaacttcggagactcaacctccctgct
cgtggcatgggtctacataagagtgcttgctttgcaagggtgaagaactg
agtctgagtctccagcacctacacaaaatgctatctgtgtctgtgaccct
accactgagaggcagaagctggctggccaaccagcccacctgaaacgatg
agcttgattcagcgagaaactgcttcaaggcaggagggccaagaatgaag
gaggaggacactgaccattcttctctgacacatgtgctcataggcccatg
catctacatgttcacacacacatacagcaagaccccactcttatatgctc
catataaaagaggcactttaggtacaacacagatgagttgaaaggaaatg
attgagaaagcaaataacaatcagaagaatggacagctattctactatca
caaagaagcaattttaagtttgaaggtattatttgaatatttatagatta
gaatattcaaattattatgtgaaaattctcctccattgatctatagattc
aatacaacctcaattaagattctactggcttcaaaaatggcacaatcaag
ctggcctcgaacttgtgatcttcctgcctctgcctccttcagcaaatcct
actgacatgcgccaccacaactggcatcacaagtggggagggaaagtgga
tgggatgggagggg
gaattcatgcagttgaatccttctcaacagtctgttttacgggaaccttt
attaccatgacccgcagttctggttccagaatgagggatcttccttgcgc
cggtgatggttaactcccgtcccgagttttcttgtcccgggttttttcgt
cccgggttctttcttcccgggtttcggcaccaactcttacacgcgttctc
gcgaccggccaggaaagacgcaacaaaccggaatcttctgcggcaaagct
ttattgcttacatcttcaggagccagagagcaagagagcaagagagcaag
agcaagaaagcaagaaaaagaacaagaacaagaaaagcaagagagcaaga
atgagaaaacaagaacaagagagagagaaagaatggcaaaaccccgtccc
ttttaaggagaattattctccgcctaggacgtattactccctgattggct
gcagcccatcggcccagttgtcatcacgagaaaggcagaacacatggcgg
gaaaactgcccctgcacgtgtgcagattatgtttaccacttagaacacag
ctgtcagcgccatcttataatggcaaatgtgagggcggctcctcacaaaa
aactttcttggaaaaaaagttaagaaaagaagagagacagagacttctaa
tccacattatctttgtactcagtcactcctgcctcagcctctgaagtcac
tgaagtcatgggatctcaggcatgtgctaccatgtttggcataaatattg
gtactctttgacccattctttctacttttagcatgctgcctaggaagtag
agcagaaagcacaagttgtatagttattgttgtattaagtaatagggcag
ttgattaattatgatccagttatagctaagaataattgctttagagcctt
tatgttttaatagtttatattctcttctgttgctttttatatctcagatg
tttttctttataagaatcatttttcactctgttatttgactgggtgttct
tagtttgggttcttcagaaacagactcttgagatgatgttttcaagctga
agttcattgggacagccctcctaactagtacttattaaccgaatgctgta
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_59144752_59145614
seq2: B6Ng01-154P12.b_51_914 (reverse)

seq1  CCCCT-CCATCCCATCCACTTTCCCTCCCCACTTGTGATGCCAGTTGTGG  49
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCATCCCATCCACTTTCCCTCCCCACTTGTGATGCCAGTTGTGG  50

seq1  TGGCGCATGTCAGTAGGATTTGCTGAAGGAGGCAGAGGCAGGAAGATCAC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGCATGTCAGTAGGATTTGCTGAAGGAGGCAGAGGCAGGAAGATCAC  100

seq1  AAGTTCGAGGCCAGCTTGATTGTGCCATTTTTGAAGCCAGTAGAATCTTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCGAGGCCAGCTTGATTGTGCCATTTTTGAAGCCAGTAGAATCTTA  150

seq1  ATTGAGGTTGTATTGAATCTATAGATCAATGGAGGAGAATTTTCACATAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGGTTGTATTGAATCTATAGATCAATGGAGGAGAATTTTCACATAA  200

seq1  TAATTTGAATATTCTAATCTATAAATATTCAAATAATACCTTCAAACTTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGAATATTCTAATCTATAAATATTCAAATAATACCTTCAAACTTA  250

seq1  AAATTGCTTCTTTGTGATAGTAGAATAGCTGTCCATTCTTCTGATTGTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTTCTTTGTGATAGTAGAATAGCTGTCCATTCTTCTGATTGTTA  300

seq1  TTTGCTTTCTCAATCATTTCCTTTCAACTCATCTGTGTTGTACCTAAAGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCTCAATCATTTCCTTTCAACTCATCTGTGTTGTACCTAAAGT  350

seq1  GCCTCTTTTATATGGAGCATATAAGAGTGGGGTCTTGCTGTATGTGTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTTATATGGAGCATATAAGAGTGGGGTCTTGCTGTATGTGTGTG  400

seq1  TGAACATGTAGATGCATGGGCCTATGAGCACATGTGTCAGAGAAGAATGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATGTAGATGCATGGGCCTATGAGCACATGTGTCAGAGAAGAATGG  450

seq1  TCAGTGTCCTCCTCCTTCATTCTTGGCCCTCCTGCCTTGAAGCAGTTTCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTCCTCCTCCTTCATTCTTGGCCCTCCTGCCTTGAAGCAGTTTCT  500

seq1  CGCTGAATCAAGCTCATCGTTTCAGGTGGGCTGGTTGGCCAGCCAGCTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGAATCAAGCTCATCGTTTCAGGTGGGCTGGTTGGCCAGCCAGCTTC  550

seq1  TGCCTCTCAGTGGTAGGGTCACAGACACAGATAGCATTTTGTGTAGGTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTCAGTGGTAGGGTCACAGACACAGATAGCATTTTGTGTAGGTGC  600

seq1  TGGAGACTCAGACTCAGTTCTTCACCCTTGCAAAGCAAGCACTCTTATGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACTCAGACTCAGTTCTTCACCCTTGCAAAGCAAGCACTCTTATGT  650

seq1  AGACCCATGCCACGAGCAGGGAGGTTGAGTCTCCGAAGTTAAGAATATTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCATGCCACGAGCAGGGAGGTTGAGTCTCCGAAGTTAAGAATATTC  700

seq1  CAGAGACCTGCATGGGAGAAGCCATTTTCTAGGCATCTGAGCTCAAGGGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACCTGCATGGGAGAAGCCATTTTCTAGGCATCTGAGCTCAAGGGT  750

seq1  AGTACAAAGAAAGCACTTTTCATTTTTGTCATCAAAACAAGCAAAACAGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAAAGAAAGCACTTTTCATTTTTGTCATCAAAACAAGCAAAACAGG  800

seq1  GGCTGGAGAGATGGCTCATCGGTTAAGAGCACTGGCTACTTGCTCTTCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGAGAGATGGCTCATCGGTTAAGAGCACTGGCTACTTGCTCTTCCA  850

seq1  GAGGTCCTGAATTC  863
      ||||||||||||||
seq2  GAGGTCCTGAATTC  864

seq1: chr4_59045411_59046415
seq2: B6Ng01-154P12.g_167_1168

seq1  CCGGTGATGGTTAACTCCCGTCCCGAGTTTTCTTGTCCCGGGTTTTTTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTGATGGTTAACTCCCGTCCCGAGTTTTCTTGTCCCGGGTTTTTTCG  50

seq1  TCCCGGGTTCTTTCTTCCCGGGTTTCGGCACCAACTCTTACACGCGTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGTTCTTTCTTCCCGGGTTTCGGCACCAACTCTTACACGCGTTCT  100

seq1  CGCGACCGGCCAGGAAAGACGCAACAAACCGGAATCTTCTGCGGCAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCGACCGGCCAGGAAAGACGCAACAAACCGGAATCTTCTGCGGCAAAGC  150

seq1  TTTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGAGCAAGAGAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGCTTACATCTTCAGGAGCCAGAGAGCAAGAGAGCAAGAGAGCAA  200

seq1  GAGCAAGAAAGCAAGAAAAAGAACAAGAACAAGAAAAGCAAGAGAGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAGAAAGCAAGAAAAAGAACAAGAACAAGAAAAGCAAGAGAGCAAG  250

seq1  AATGAGAAAACAAGAACAAGAGAGAGAGAAAGAATGGCAAAACCCCGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAAACAAGAACAAGAGAGAGAGAAAGAATGGCAAAACCCCGTCC  300

seq1  CTTTTAAGGAGAATTATTCTCCGCCTAGGACGTATTACTCCCTGATTGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAAGGAGAATTATTCTCCGCCTAGGACGTATTACTCCCTGATTGGC  350

seq1  TGCAGCCCATCGGCCCAGTTGTCATCACGAGAAAGGCAGAACACATGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCCCATCGGCCCAGTTGTCATCACGAGAAAGGCAGAACACATGGCG  400

seq1  GGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACTGCCCCTGCACGTGTGCAGATTATGTTTACCACTTAGAACACA  450

seq1  GCTGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCTCACAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCAGCGCCATCTTATAATGGCAAATGTGAGGGCGGCTCCTCACAAA  500

seq1  AAACTTTCTTGGAAAAAAAGTTAAGAAAAGAAGAGAGACAGAGACTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCTTGGAAAAAAAGTTAAGAAAAGAAGAGAGACAGAGACTTCTA  550

seq1  ATCCACATTATCTTTGTACTCAGTCACTCCTGCCTCAGCCTCTGAAGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACATTATCTTTGTACTCAGTCACTCCTGCCTCAGCCTCTGAAGTCA  600

seq1  CTGAAGTCATGGGATCTCAGGCATGTGCTACCATGTTTGGCATAAATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGTCATGGGATCTCAGGCATGTGCTACCATGTTTGGCATAAATATT  650

seq1  GGTACTCTTTGACCCATTCTTTCTACTTTTAGCATGCTGCCTAGGAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTCTTTGACCCATTCTTTCTACTTTTAGCATGCTGCCTAGGAAGTA  700

seq1  GAGCAGAAAGCACAAGTTGTATAGTTATTGTTGTATTAAGTAATAGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAAAGCACAAGTTGTATAGTTATTGTTGTATTAAGTAATAGGGCA  750

seq1  GTTGATTAATTATGATCCAGTTATAGCTAAGAATAATTGCTTTAGAGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTAATTATGATCCAGTTATAGCTAAGAATAATTGCTTTAGAGCCT  800

seq1  TTATGTTTTAATAGTTTATATTCTCTTCTGTTGCTTTTTATATCTCAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTTAATAGTTTATATTCTCTTCTGTTGCTTTTTATATCTCAGAT  850

seq1  GTTTTTCTTTATAAGAATCATTTTTCACTCTGTTATTTGACTGGGTG-TC  899
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTTTTTCTTTATAAGAATCATTTTTCACTCTGTTATTTGACTGGGTGTTC  900

seq1  TTAGTTTTGGGTTCTTCAGGAAAACAGACTC-TGAGATGAAGGTTTTCAA  948
      |||| ||||||||||||||  |||||||||| ||||||| | ||||||||
seq2  TTAG-TTTGGGTTCTTCAG--AAACAGACTCTTGAGATG-ATGTTTTCAA  946

seq1  GCTGGAAGTTCATTGGGGCCAGCCCTCCTAACTAGTACTTATT-ACCGAA  997
      ||| |||||||||| ||| |||||||||||||||||||||||| ||||||
seq2  GCT-GAAGTTCATT-GGGACAGCCCTCCTAACTAGTACTTATTAACCGAA  994

seq1  TGCTGTAA  1005
      ||||||||
seq2  TGCTGTAA  1002