BAC Information

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BAC

Clone NameB6Ng01-155B12
Chromosome4 (Build37)
Map Location 7,648,451 - 7,779,791
singlet/doubletdoublet
Overlap genenone
Upstream geneTox, LOC100039421, LOC666700
Downstream geneCar8, LOC100039494, LOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155B12.bB6Ng01-155B12.g
ACCDH949966DH949967
length1,162986
definitionDH949966|Mus musculus domesticus DNA, BAC clone: B6Ng01-155B12, 5' end.DH949967|Mus musculus domesticus DNA, BAC clone: B6Ng01-155B12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,778,618 - 7,779,791)(7,648,451 - 7,649,390)
sequence
gaattcactcgttaattcacactattcatttgggtttcactttttggttc
attttgccaggcttatctggtagatacaagtaactttaaaaatacatgta
tctccccgttgaactgcagtactttcagctgtagctccttatttgaacag
cttgaggactaatttgaatcgcacttctcttgtgggtgttccaaaagctt
gtgctatctcagggagttgccttgtggagacattaaagatgttttttaaa
tgaagcacatcaagattcgctaaattacatatggtttgatctaggaaagg
acaattggagacttcattaaaatagatttattccaacttcatgtatggaa
ataaattttcttgtgataacttggtctgtgcccatccagattgtagcatt
tccctagtttctaaattaaatgtttctacatgtgaatcttggctctatat
gggcatatattaaaaggcttagtcatcattattttaagtatcccagaatt
gagtcaggtttctcaggagctttgcagcttagtcgcttgctttgatttgg
ttcactttcaattatcttcccttcctcttctcctgtgtttctgcttttaa
aaaaaaaatatctattttaactttaggtaagaactaaactatcttctgtt
gcataaatcttggtcttctctgcattgttgcctttaagtgctgagccttt
ttctagtagaagggagagattcctacttcaaggggacagattttatatac
tatgtcatttcaataaagaaatataaggaaatttttcttagattggcttt
taaattgggagaagcaagtgacaaaaagattcattatcttatctagtgtc
atcaagatgataaacactagagctgtggtttcatgctgggcttttctcaa
tctgaagcccaagggtcttatgtcatatcaagcctctgacatatgcttgg
tttaagttaacaccaaggcctcttagaacgcagacaaacaaaccacacct
acctcacatttcatcagaaatatatatgaaatacttaatacttcccttta
catgatacagtctgcttttattcattgatctactgtatttctccagttga
ctgtaaaaagcatgataatgctaacatgaaactcaccaagcatttagtta
tgctatggtatg

gaattctggagctctggccccactggagagttggcaggcagaggtagcct
ggtggtatagcgccaggcagaaagtagctggatggagcccaagaacttgg
cggttctacttggttactggagtgtgggactgcggggatctccagtcgga
atagcaggaaagttaggaatatgcaaagtaagggaggcacttgtatggat
gataccagtatcacataatctagaaattaaagatggaatcatgttcttaa
aaggaagcctaaaatcatagacaacccaaatatcttgtattgttatccac
cactgatagtacaagagataactctaattcaatccttaaaagctttggga
acattgaaatgaaattgtatcattcaatgaaaaaaaaattagaagtagaa
tttagttttcattaatgaataaaagttaggagctctctaaatctgactat
tgtatagcaaagggaacactcggcaaaatgacaaggaggccaacggaatg
ggagaaagattcgccagctgtatgatcaaaaaaaatgttgatatctaaaa
cacaactcaaggaagaaaagcatcaggaaaccgaacaatgtaataaaaat
atgattaaatatttggacagaaaaattaatacataaggaaatgattcaac
atcactattatggaaatgcaaagttaaactattttgagattctttcacac
tgcactcagaatggctgtcgtcagaaatcaattaacagcaaacaactgag
gctatggaaaaagaggtatccatattcactgattattggagtgcaaactg
gtacatctactatggaaactatgtgtatgttcctcaaacagagataccat
gtgactcgaaaattccattcctgagcatatacaacagactactactactg
agacactggttaatagatgtttattcctgttctcgtctcactcacagagt
tacaaatccaattagctagatgcctttcactgacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_7778618_7779791
seq2: B6Ng01-155B12.b_46_1207 (reverse)

seq1  CATAGCATA-CATAAC---ATGCTTTGTTGAGTTTTCATTGTTAGCCATT  46
      |||| |||| ||||||   |||| ||| |||| ||||| |||||| ||||
seq2  CATACCATAGCATAACTAAATGC-TTGGTGAG-TTTCA-TGTTAG-CATT  46

seq1  ATCATGCTTTTCTACAGTCAAAACTGGGAAGAAATAACAGTAGATCAATT  96
      ||||||||||| |||||||  ||||||  |||||| |||||||||||| |
seq2  ATCATGCTTTT-TACAGTC--AACTGG--AGAAAT-ACAGTAGATCAA-T  89

seq1  GAATAAAAAGCAGAACTGTATCATTGTAAAGGGAAGTATAAAGTATTTCA  146
      |||| |||||||| ||||||||| ||||||||||||||| ||||||||||
seq2  GAAT-AAAAGCAG-ACTGTATCA-TGTAAAGGGAAGTATTAAGTATTTCA  136

seq1  TATATATTTCTTGGTGAATTGTGAGGTAGGTGTGGTTTTGTTTGTCTGCG  196
      |||||||||| || |||| |||||||||||||||| ||||||||||||||
seq2  TATATATTTC-TGATGAAATGTGAGGTAGGTGTGG-TTTGTTTGTCTGCG  184

seq1  TTTCTAAGAGGCC-TGGTGTTAACCTAAACCAAGCATATGTCAGAGGCTT  245
       |||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  -TTCTAAGAGGCCTTGGTGTTAACTTAAACCAAGCATATGTCAGAGGCTT  233

seq1  GATATGACATAAGACCCTTGGGCTTCAGATTGAGAAAAGCCCAGCATGAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGACATAAGACCCTTGGGCTTCAGATTGAGAAAAGCCCAGCATGAA  283

seq1  ACCACAGCTCTAGTGTTTATCATCTTGATGACACTAGATAAGATAATGAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAGCTCTAGTGTTTATCATCTTGATGACACTAGATAAGATAATGAA  333

seq1  TCTTTTTGTCACTTGCTTCTCCCAATTTAAAAGCCAATCTAAGAAAAATT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTGTCACTTGCTTCTCCCAATTTAAAAGCCAATCTAAGAAAAATT  383

seq1  TCCTTATATTTCTTTATTGAAATGACATAGTATATAAAATCTGTCCCCTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATATTTCTTTATTGAAATGACATAGTATATAAAATCTGTCCCCTT  433

seq1  GAAGTAGGAATCTCTCCCTTCTACTAGAAAAAGGCTCAGCACTTAAAGGC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGAATCTCTCCCTTCTACTAGAAAAAGGCTCAGCACTTAAAGGC  483

seq1  AACAATGCAGAGAAGACCAAGATTTATGCAACAGAAGATAGTTTAGTTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGCAGAGAAGACCAAGATTTATGCAACAGAAGATAGTTTAGTTCT  533

seq1  TACCTAAAGTTAAAATAGATATTTTTTTTTTAAAAGCAGAAACACAGGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAAAGTTAAAATAGATATTTTTTTTTTAAAAGCAGAAACACAGGAG  583

seq1  AAGAGGAAGGGAAGATAATTGAAAGTGAACCAAATCAAAGCAAGCGACTA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAGGGAAGATAATTGAAAGTGAACCAAATCAAAGCAAGCGACTA  633

seq1  AGCTGCAAAGCTCCTGAGAAACCTGACTCAATTCTGGGATACTTAAAATA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAAAGCTCCTGAGAAACCTGACTCAATTCTGGGATACTTAAAATA  683

seq1  ATGATGACTAAGCCTTTTAATATATGCCCATATAGAGCCAAGATTCACAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGACTAAGCCTTTTAATATATGCCCATATAGAGCCAAGATTCACAT  733

seq1  GTAGAAACATTTAATTTAGAAACTAGGGAAATGCTACAATCTGGATGGGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAACATTTAATTTAGAAACTAGGGAAATGCTACAATCTGGATGGGC  783

seq1  ACAGACCAAGTTATCACAAGAAAATTTATTTCCATACATGAAGTTGGAAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACCAAGTTATCACAAGAAAATTTATTTCCATACATGAAGTTGGAAT  833

seq1  AAATCTATTTTAATGAAGTCTCCAATTGTCCTTTCCTAGATCAAACCATA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTATTTTAATGAAGTCTCCAATTGTCCTTTCCTAGATCAAACCATA  883

seq1  TGTAATTTAGCGAATCTTGATGTGCTTCATTTAAAAAACATCTTTAATGT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTAGCGAATCTTGATGTGCTTCATTTAAAAAACATCTTTAATGT  933

seq1  CTCCACAAGGCAACTCCCTGAGATAGCACAAGCTTTTGGAACACCCACAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAAGGCAACTCCCTGAGATAGCACAAGCTTTTGGAACACCCACAA  983

seq1  GAGAAGTGCGATTCAAATTAGTCCTCAAGCTGTTCAAATAAGGAGCTACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTGCGATTCAAATTAGTCCTCAAGCTGTTCAAATAAGGAGCTACA  1033

seq1  GCTGAAAGTACTGCAGTTCAACGGGGAGATACATGTATTTTTAAAGTTAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGTACTGCAGTTCAACGGGGAGATACATGTATTTTTAAAGTTAC  1083

seq1  TTGTATCTACCAGATAAGCCTGGCAAAATGAACCAAAAAGTGAAACCCAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCTACCAGATAAGCCTGGCAAAATGAACCAAAAAGTGAAACCCAA  1133

seq1  ATGAATAGTGTGAATTAACGAGTGAATTC  1174
      |||||||||||||||||||||||||||||
seq2  ATGAATAGTGTGAATTAACGAGTGAATTC  1162


seq1: chr4_7648451_7649390
seq2: B6Ng01-155B12.g_68_1006

seq1  GAATTCTGGAGCTCTGGCCCCACTGGAGAGTTGGCAGGCAGAGGTAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGAGCTCTGGCCCCACTGGAGAGTTGGCAGGCAGAGGTAGCCT  50

seq1  GGTGGTATAGCGCCAGGCAGAAAGTAGCTGGATGGAGCCCAAGAACTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTATAGCGCCAGGCAGAAAGTAGCTGGATGGAGCCCAAGAACTTGG  100

seq1  CGGTTCTACTTGGTTACTGGAGTGTGGGACTGCGGGGATCTCCAGTCGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTCTACTTGGTTACTGGAGTGTGGGACTGCGGGGATCTCCAGTCGGA  150

seq1  ATAGCAGGAAAGTTAGGAATATGCAAAGTAAGGGAGGCACTTGTATGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAGGAAAGTTAGGAATATGCAAAGTAAGGGAGGCACTTGTATGGAT  200

seq1  GATACCAGTATCACATAATCTAGAAATTAAAGATGGAATCATGTTCTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCAGTATCACATAATCTAGAAATTAAAGATGGAATCATGTTCTTAA  250

seq1  AAGGAAGCCTAAAATCATAGACAACCCAAATATCTTGTATTGTTATCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGCCTAAAATCATAGACAACCCAAATATCTTGTATTGTTATCCAC  300

seq1  CACTGATAGTACAAGAGATAACTCTAATTCAATCCTTAAAAGCTTTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGATAGTACAAGAGATAACTCTAATTCAATCCTTAAAAGCTTTGGGA  350

seq1  ACATTGAAATGAAATTGTATCATTCAATGAAAAAAAAATTAGAAGTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAAATGAAATTGTATCATTCAATGAAAAAAAAATTAGAAGTAGAA  400

seq1  TTTAGTTTTCATTAATGAATAAAAGTTAGGAGCTCTCTAAATCTGACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTTCATTAATGAATAAAAGTTAGGAGCTCTCTAAATCTGACTAT  450

seq1  TGTATAGCAAAGGGAACACTCGGCAAAATGACAAGGAGGCCAACGGAATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCAAAGGGAACACTCGGCAAAATGACAAGGAGGCCAACGGAATG  500

seq1  GGAGAAAGATTCGCCAGCTGTATGATCAAAAAAAATGTTGATATCTAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGATTCGCCAGCTGTATGATCAAAAAAAATGTTGATATCTAAAA  550

seq1  CACAACTCAAGGAAGAAAAGCATCAGGAAACCGAACAATGTAATAAAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACTCAAGGAAGAAAAGCATCAGGAAACCGAACAATGTAATAAAAAT  600

seq1  ATGATTAAATATTTGGACAGAAAAATTAATACATAAGGAAATGATTCAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTAAATATTTGGACAGAAAAATTAATACATAAGGAAATGATTCAAC  650

seq1  ATCACTATTATGGAAATGCAAAGTTAAACTATTTTGAGATTCTTTCACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACTATTATGGAAATGCAAAGTTAAACTATTTTGAGATTCTTTCACAC  700

seq1  TGCACTCAGAATGGCTGTCGTCAGAAATCAATTAACAGCAAACAACTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTCAGAATGGCTGTCGTCAGAAATCAATTAACAGCAAACAACTGAG  750

seq1  GCTATGGAAAAAGAGGTATCCATATTCACTGATTATTGGAGTGCAAACTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGGAAAAAGAGGTATCCATATTCACTGATTATTGGAGTGCAAACTG  800

seq1  GTACATCTACTATGGAAACTAATGTGTATGTTCCTCAAACAGAGATACCA  850
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GTACATCTACTATGGAAACT-ATGTGTATGTTCCTCAAACAGAGATACCA  849

seq1  TGTGACTCGAAAATTCCATTCCTGAGCATATACAACAGACTACTACTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTCGAAAATTCCATTCCTGAGCATATACAACAGACTACTACTACT  899

seq1  GAGACACTGGTTAATAGATGTTTATTCCTGTTCTCGTCTC  940
      ||||||||||||||||||||||||||||||||||||||||
seq2  GAGACACTGGTTAATAGATGTTTATTCCTGTTCTCGTCTC  939


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