BAC Information

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BAC

Clone NameB6Ng01-155P02
Chromosome4 (Build37)
Map Location 18,322,072 - 18,390,728
singlet/doubletdoublet
Overlap genenone
Upstream geneMmp16
Downstream geneLOC667251, LOC435772, Cngb3, LOC623122
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-155P02.bB6Ng01-155P02.g
ACCDH950580DH950581
length9151,028
definitionDH950580|Mus musculus domesticus DNA, BAC clone: B6Ng01-155P02, 5' end.DH950581|Mus musculus domesticus DNA, BAC clone: B6Ng01-155P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,389,815 - 18,390,728)(18,322,072 - 18,322,895)
sequence
gaattccaagctgtttgttgacagcagtgcaggctccctcatatgaacta
ggtagcatttattacttacagtctaggatccaggcagtttgcacacattt
cctataatcctcatagcaatgaagcaagtcagggattggtattccatttt
ccaaacaggaaatggtggatcaggcagggtttggaaacagttgaaatgca
gcagctaacagtaatagcagatagactagtctctgcttttgtttctatgt
aaaggataagtccttcctcaaatatcaacttccaaacaagtgtatactta
atttgaacagtttatgttttgctattttgtttgcttccaactatttggct
tgagggtgatatcagccattagattatgaatccctgtcagtgaagggggc
tagtctctttctttctttgcatcactttgcctatatctagaatagaaggt
atattcagtacatattgactgaagatctgctcaattaaaaagataaagaa
gacattaatgatatccaaagtagtgcttgagattcaggaacaatttgagt
gctatgtaggtatgtatgtttttaagatggtgaaggtgttaagtgtgtgc
gaacagtatgtggtgtgttggcttcagctgagtgattgggcatgaaaaaa
ctgtaaaatatgcatgtttcaagttaaatgatgaattttgcctatcttcc
tgttctagtttcttttttaataattctcagattcactagtgttcaatttc
ttagtgcacttttatgaactactgaatcttctagctttggatctgttcta
atagtagttttgttttagaaagaaattttgtcatccatcttaaaaaacaa
atatcatcttattgtataacctgtgctaattcacatttaaccttaacaag
taacatacaagtttt
gaattcagtagagtgcaaagaagttcagttgagtggggttcaattcagtc
agtgcagttcagttcatggagttcagaggcagttttgctaagcaaagcaa
ttcagtaagtagataagagaatccagtttgaataagtaaccttggagatg
agttttgagccaaatagctgagttgaaccagccagtaaaagtttaaaaag
aactagaaagagtgtgtatattcagcattaagcttctgatatgataattc
attatatctggcaaataaaagttactttttaaagtccactaaacttatgt
gttttatttagcatcatttactaaattgctatgcgtgctccagtgatgtc
tgcttggcaggcctggaggcctggaagcactcacgaggcaaagcatttca
cggaaactcacctcctggaactttggccttctcataacccgcatactcat
accctatccccaagttagtctggtgtatggatccacgtgctctctttcaa
ttttattttattatgagtgacttttaagattgaattctgacataagcctt
cgccagtgttccaatgtcccagaaaatccttgaagccaacaaacttggaa
ttcagtaggaattcagtgagaaggttatctattcagtaacattcaaattt
acttctaatagagacaatgaaactaattaggcattacaaagaacagagct
ggaatagctcagggctggtctgcagagtgtttacttgggacaatagccag
tcttacccagacaaggaaattcacaatggcctaaagaagaggggagttta
ccatttaagagttaaaggaatcccactgagacaggaatcttcactatagc
caggtatagcagctacattgcatattagaagcaagttggtgaatacttct
gacaatggagattctccacagatacttaaagacagccaagttacactcat
agagatttatcaggccagaatagggggttgtggtatgcattatcatgaga
ggtcttgttatgcagatccctgtgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18389815_18390728
seq2: B6Ng01-155P02.b_42_956 (reverse)

seq1  AAAACTTGTATGTTACTTTGTTAAAGGTTAAAATGTGAA-TAGCACAGG-  48
      |||||||||||||||| ||||| |||||| ||||||||| ||||||||| 
seq2  AAAACTTGTATGTTAC-TTGTT-AAGGTT-AAATGTGAATTAGCACAGGT  47

seq1  TATACAATAAGATGATATTTGTTTTTTAAGATGGATGACAAAATTTCTTT  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATAAGATGATATTTGTTTTTTAAGATGGATGACAAAATTTCTTT  97

seq1  CTAAAACAAAACTACTATTAGAACAGATCCAAAGCTAGAAGATTCAGTAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACAAAACTACTATTAGAACAGATCCAAAGCTAGAAGATTCAGTAG  147

seq1  TTCATAAAAGTGCACTAAG-AATTGAACACTAGTGAATCTGAGAATTATT  197
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCATAAAAGTGCACTAAGAAATTGAACACTAGTGAATCTGAGAATTATT  197

seq1  -AAAAAGAAACTAGAACAGGAAGATAGGCAAAATTCATCATTTAACTTGA  246
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAACTAGAACAGGAAGATAGGCAAAATTCATCATTTAACTTGA  247

seq1  AACATGCATATTTTACAGTTTTTTCATGCCCAATCACTCAGCTGAAGCCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCATATTTTACAGTTTTTTCATGCCCAATCACTCAGCTGAAGCCA  297

seq1  ACACACCACATACTGTTCGCACACACTTAACACCTTCACCATCTTAAAAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCACATACTGTTCGCACACACTTAACACCTTCACCATCTTAAAAA  347

seq1  CATACATACCTACATAGCACTCAAATTGTTCCTGAATCTCAAGCACTACT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACCTACATAGCACTCAAATTGTTCCTGAATCTCAAGCACTACT  397

seq1  TTGGATATCATTAATGTCTTCTTTATCTTTTTAATTGAGCAGATCTTCAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATATCATTAATGTCTTCTTTATCTTTTTAATTGAGCAGATCTTCAG  447

seq1  TCAATATGTACTGAATATACCTTCTATTCTAGATATAGGCAAAGTGATGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGTACTGAATATACCTTCTATTCTAGATATAGGCAAAGTGATGC  497

seq1  AAAGAAAGAAAGAGACTAGCCCCCTTCACTGACAGGGATTCATAATCTAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAAGAGACTAGCCCCCTTCACTGACAGGGATTCATAATCTAA  547

seq1  TGGCTGATATCACCCTCAAGCCAAATAGTTGGAAGCAAACAAAATAGCAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGATATCACCCTCAAGCCAAATAGTTGGAAGCAAACAAAATAGCAA  597

seq1  AACATAAACTGTTCAAATTAAGTATACACTTGTTTGGAAGTTGATATTTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAACTGTTCAAATTAAGTATACACTTGTTTGGAAGTTGATATTTG  647

seq1  AGGAAGGACTTATCCTTTACATAGAAACAAAAGCAGAGACTAGTCTATCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGACTTATCCTTTACATAGAAACAAAAGCAGAGACTAGTCTATCT  697

seq1  GCTATTACTGTTAGCTGCTGCATTTCAACTGTTTCCAAACCCTGCCTGAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTACTGTTAGCTGCTGCATTTCAACTGTTTCCAAACCCTGCCTGAT  747

seq1  CCACCATTTCCTGTTTGGAAAATGGAATACCAATCCCTGACTTGCTTCAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATTTCCTGTTTGGAAAATGGAATACCAATCCCTGACTTGCTTCAT  797

seq1  TGCTATGAGGATTATAGGAAATGTGTGCAAACTGCCTGGATCCTAGACTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATGAGGATTATAGGAAATGTGTGCAAACTGCCTGGATCCTAGACTG  847

seq1  TAAGTAATAAATGCTACCTAGTTCATATGAGGGAGCCTGCACTGCTGTCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAATAAATGCTACCTAGTTCATATGAGGGAGCCTGCACTGCTGTCA  897

seq1  ACAAACAGCTTGGAATTC  914
      ||||||||||||||||||
seq2  ACAAACAGCTTGGAATTC  915

seq1: chr4_18322072_18322895
seq2: B6Ng01-155P02.g_69_893

seq1  GAATTCAGTAGAGTGCAAAGAAGTTCAGTTGAGTGGGGTTCAATTCAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGAGTGCAAAGAAGTTCAGTTGAGTGGGGTTCAATTCAGTC  50

seq1  AGTGCAGTTCAGTTCATGGAGTTCAGAGGCAGTTTTGCTAAGCAAAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGTTCAGTTCATGGAGTTCAGAGGCAGTTTTGCTAAGCAAAGCAA  100

seq1  TTCAGTAAGTAGATAAGAGAATCCAGTTTGAATAAGTAACCTTGGAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAAGTAGATAAGAGAATCCAGTTTGAATAAGTAACCTTGGAGATG  150

seq1  AGTTTTGAGCCAAATAGCTGAGTTGAACCAGCCAGTAAAAGTTTAAAAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAGCCAAATAGCTGAGTTGAACCAGCCAGTAAAAGTTTAAAAAG  200

seq1  AACTAGAAAGAGTGTGTATATTCAGCATTAAGCTTCTGATATGATAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGAAAGAGTGTGTATATTCAGCATTAAGCTTCTGATATGATAATTC  250

seq1  ATTATATCTGGCAAATAAAAGTTACTTTTTAAAGTCCACTAAACTTATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATCTGGCAAATAAAAGTTACTTTTTAAAGTCCACTAAACTTATGT  300

seq1  GTTTTATTTAGCATCATTTACTAAATTGCTATGCGTGCTCCAGTGATGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTTAGCATCATTTACTAAATTGCTATGCGTGCTCCAGTGATGTC  350

seq1  TGCTTGGCAGGCCTGGAGGCCTGGAAGCACTCACGAGGCAAAGCATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGCAGGCCTGGAGGCCTGGAAGCACTCACGAGGCAAAGCATTTCA  400

seq1  CGGAAACTCACCTCCTGGAACTTTGGCCTTCTCATAACCCGCATACTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAACTCACCTCCTGGAACTTTGGCCTTCTCATAACCCGCATACTCAT  450

seq1  ACCCTATCCCCAAGTTAGTCTGGTGTATGGATCCACGTGCTCTCTTTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATCCCCAAGTTAGTCTGGTGTATGGATCCACGTGCTCTCTTTCAA  500

seq1  TTTTATTTTATTATGAGTGACTTTTAAGATTGAATTCTGACATAAGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTATTATGAGTGACTTTTAAGATTGAATTCTGACATAAGCCTT  550

seq1  CGCCAGTGTTCCAATGTCCCAGAAAATCCTTGAAGCCAACAAACTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGTGTTCCAATGTCCCAGAAAATCCTTGAAGCCAACAAACTTGGAA  600

seq1  TTCAGTAGGAATTCAGTGAGAAGGTTATCTATTCAGTAACATTCAAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGTAGGAATTCAGTGAGAAGGTTATCTATTCAGTAACATTCAAATTT  650

seq1  ACTTCTAATAGAGACAATGAAACTAATTAGGCATTACAAAGAACAGAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTAATAGAGACAATGAAACTAATTAGGCATTACAAAGAACAGAGCT  700

seq1  GGAATAGCTCAGGGCTGGTCTGCAGAGTGTTTACTTGGGACAATAGCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATAGCTCAGGGCTGGTCTGCAGAGTGTTTACTTGGGACAATAGCCAG  750

seq1  TCTTACCCAGACAAGGAAATTCACAATGGCCTAAAGAAGAGGGGAGTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCCAGACAAGGAAATTCACAATGGCCTAAAGAAGAGGGGAGTTTA  800

seq1  CCATTTAAGAGTT-AAGGAATCCCA  824
      ||||||||||||| |||||||||||
seq2  CCATTTAAGAGTTAAAGGAATCCCA  825