BAC Information

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BAC

Clone NameB6Ng01-159P08
Chromosome4 (Build37)
Map Location 119,152,064 - 119,152,992
singlet/doubletsinglet
Overlap geneBC057371
Upstream geneTie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519, Lao1, LOC666703, OTTMUSG00000008833, Slc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs, Zmynd12
Downstream geneLOC666766, LOC384052, AA415398, Foxj3, Guca2a, Guca2b, Hivep3, Edn2, Foxo6, Scmh1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-159P08.bB6Ng01-159P08.g
ACCDH953470DH953471
length1,164932
definitionDH953470|Mus musculus domesticus DNA, BAC clone: B6Ng01-159P08, 5' end.DH953471|Mus musculus domesticus DNA, BAC clone: B6Ng01-159P08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagaacttttcagctggggaacgagagtaccagtgagtacagctt
cacgaggtaagcctggccttgaactttctaacgaaattcaagacagtcta
tcagaagtaaagtggaatatgtttggccttgaattttttctggtgttagg
agcccttttgttccttttcacatgttatcaagtggttaagatagggctga
aaattctagaggaaattcaggacaagctatcagaagtaaagcggggagag
agagtaggaacaaaaaggaaatatggtacacaaaataagtatacaggcct
ttccaagggtcttgaacccgaggaaaagtttaggtcaggtaagaatacct
ggagagagattagaagaaaaagaggaaaaagggaaaagaagaaagatcaa
ttagcggaggtctctaggagatactcgtcactagatgagctcaggaagcc
agctcttagtagttctgaagcagatgaagaattctcctctgaggaaacag
actgggaggaagaagcagcccattaccagccagctaattggtcaagaaaa
aagccaaaagcggctggcgaaggccagtttgctgattggcctcagggcag
tcggcttcaaggtccgccctatgcggagtccccgccctgcgtagtgcgtc
agcaatgcgcagagaggcagtgcgcagagaggcagtgcgcagactcattc
attcccagagaggaacaaaggaaaatacaacaggcatttccggtctttga
aggagccgagggtgggcgtgtccacgctccggtagaatacttacaaatta
aagaaattgctgagtcggttcgtaatacggaaccaatgctaattttacct
tggtgcagtagacaggctcgctggcatggcactaacttcctgctgactgg
caaacggttgtaaagccgctctccctagtatgggcaatacatgggaatgg
aaagcgctttgggcacgagctgcacagcgcagccgagcaaacgcagctgc
tttgactcagagcagagagatggacttttgacttgttacgggtcaggagc
ttattctgctgatcagactactacaattggggagctattgccagaatttc
tcacgcctattagggcctgaaggcgcctctctcgagcaggtgtaaccact
ctggtccggtaaca
gaattctttggcttgccttgcatgacaccaagaggcagagctagccttga
aatgctttttgtctgttttgtgctgactccagtccctggagcagtacccg
gtgcctagttggcacttggtatttgttgaattggacaggaacagcaggaa
gatggatctgggcttcaccaagttcctttactcttccatacctttagaat
ggagcgggcactggaacatggcatagagagaatgccagggtagaggtggc
tatgcacactgcctggtgactctcagcactgacaccccagggtttgtctg
actccagacactgagcatctacagggtacagggcacctgggatggaggga
gggaggcagggcatggactatgtgaagcaatgaaaattggatttcaagac
ttcctcaaagcatcgcccaaatgccctaaagaaaacctaaaagtacagac
tacagacccaccttatgggcttaaatataaccaaaaaccaagtgcaagtg
agatcactttcctcatcgaggattcaggtgtgggtgttgctcagtgctag
ggtgtgtactgacctcgtatgagggcctgagttcaagggcctcctaagct
tgcacagtgctgcacagcatctcctaaactaggcatgggagcatacgcct
gcactctcagccctcaggatgtcgaggcagtaggaaaaagagttcgaagg
tttgcttgggctacgtggcaatgatatggtttactatatcaagatcgaag
ttctaagctgagaaagacaaagaaaaatctcaaaaacaaaaacccaccaa
acaaaaagcaagccatcccacaaaaaggaccgtggggctctaatttgata
gtcagccattccaaataatttactgggttatttttttttacgtgtgaatg
tagaagggacagttagtaagtcacattttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_119152064_119152992
seq2: B6Ng01-159P08.g_67_998

seq1  GAATTCTTTGGCTTGCCTTGCATGACACCAAGAGGCAGAGCTAGCCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGGCTTGCCTTGCATGACACCAAGAGGCAGAGCTAGCCTTGA  50

seq1  AATGCTTTTTGTCTGTTTTGTGCTGACTCCAGTCCCTGGAGCAGTACCCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTTTGTCTGTTTTGTGCTGACTCCAGTCCCTGGAGCAGTACCCG  100

seq1  GTGCCTAGTTGGCACTTGGTATTTGTTGAATTGGACAGGAACAGCAGGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTAGTTGGCACTTGGTATTTGTTGAATTGGACAGGAACAGCAGGAA  150

seq1  GATGGATCTGGGCTTCACCAAGTTCCTTTACTCTTCCATACCTTTAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATCTGGGCTTCACCAAGTTCCTTTACTCTTCCATACCTTTAGAAT  200

seq1  GGAGCGGGCACTGGAACATGGCATAGAGAGAATGCCAGGGTAGAGGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCGGGCACTGGAACATGGCATAGAGAGAATGCCAGGGTAGAGGTGGC  250

seq1  TATGCACACTGCCTGGTGACTCTCAGCACTGACACCCCAGGGTTTGTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCACACTGCCTGGTGACTCTCAGCACTGACACCCCAGGGTTTGTCTG  300

seq1  ACTCCAGACACTGAGCATCTACAGGGTACAGGGCACCTGGGATGGAGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGACACTGAGCATCTACAGGGTACAGGGCACCTGGGATGGAGGGA  350

seq1  GGGAGGCAGGGCATGGACTATGTGAAGCAATGAAAATTGGATTTCAAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCAGGGCATGGACTATGTGAAGCAATGAAAATTGGATTTCAAGAC  400

seq1  TTCCTCAAAGCATCGCCCAAATGCCCTAAAGAAAACCTAAAAGTACAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCAAAGCATCGCCCAAATGCCCTAAAGAAAACCTAAAAGTACAGAC  450

seq1  TACAGACCCACCTTATGGGCTTAAATATAACCAAAAACCAAGTGCAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACCCACCTTATGGGCTTAAATATAACCAAAAACCAAGTGCAAGTG  500

seq1  AGATCACTTTCCTCATCGAGGATTCAGGTGTGGGTGTTGCTCAGTGCTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCACTTTCCTCATCGAGGATTCAGGTGTGGGTGTTGCTCAGTGCTAG  550

seq1  GGTGTGTACTGACCTCGTATGAGGGCCTGAGTTCAAGGGCCTCCTAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTACTGACCTCGTATGAGGGCCTGAGTTCAAGGGCCTCCTAAGCT  600

seq1  TGCACAGTGCTGCACAGCATCTCCTAAACTAGGCATGGGAGCATACGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTGCTGCACAGCATCTCCTAAACTAGGCATGGGAGCATACGCCT  650

seq1  GCACTCTCAGCCCTCAGGATGTCGAGGCAGTAGGAAAAAGAGTTCGAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTCAGCCCTCAGGATGTCGAGGCAGTAGGAAAAAGAGTTCGAAGG  700

seq1  -TTGCTTGGGCTACGTGGCAATGATATGG-TTACTATATCAAGATCGAAG  748
       |||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTGCTTGGGCTACGTGGCAATGATATGGTTTACTATATCAAGATCGAAG  750

seq1  TTCTAAGCTGAGAAAGACAAAGAAAAATCTCAAAAACAAAAACCCAACCA  798
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCTAAGCTGAGAAAGACAAAGAAAAATCTCAAAAACAAAAACCC-ACCA  799

seq1  AACAAAAAGCAAGCCAT-CCACAAAAAGGACCGTGGGGCTCTAATTTGAA  847
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  AACAAAAAGCAAGCCATCCCACAAAAAGGACCGTGGGGCTCTAATTTGAT  849

seq1  AGTCAGCCATTCCAAATAATTTACT-GGTTATTTTTTTTTAAGGTGTGGA  896
      ||||||||||||||||||||||||| |||||||||||||| | ||||| |
seq2  AGTCAGCCATTCCAAATAATTTACTGGGTTATTTTTTTTT-ACGTGTGAA  898

seq1  TGTAG-AGGGACAGTTAGTAAGTCACATTTTTTT  929
      ||||| ||||||||||||||||||||||||||||
seq2  TGTAGAAGGGACAGTTAGTAAGTCACATTTTTTT  932