BAC Information

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BAC

Clone NameB6Ng01-163D14
Chromosome4 (Build37)
Map Location 104,270,941 - 104,399,166
singlet/doubletdoublet
Overlap geneDab1
Upstream geneEG665460, LOC622315
Downstream geneC8b, C8a, 1700024P16Rik, Prkaa2, LOC100039513, Ppap2b, LOC433742, LOC665518, LOC434381
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-163D14.bB6Ng01-163D14.g
ACCDH955865DH955866
length1,190213
definitionDH955865|Mus musculus domesticus DNA, BAC clone: B6Ng01-163D14, 5' end.DH955866|Mus musculus domesticus DNA, BAC clone: B6Ng01-163D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,397,972 - 104,399,166)(104,270,941 - 104,271,153)
sequence
gaattcttacatgcttccagtggtcctcatggttctcatggggacacata
catggacacctaagcctaagagacatgtggctgttcagtcggggcagaag
gtagagaagctagctttgcccaaagaagcacttcaaatgactgccagaat
aaaactataggtgcaaaaacggtgagatcagaatgaaacaggagaggatt
cagggtatgctagcaacacgaaaaaggatgattgacaggtgccgtagcaa
tgataacatcatggttcatgtcagcgactcttctgagcccacagtgatca
tatacgagagtacctggttctagtctcaattcaactgcccctcaaccgac
tgaagctggatcaagtcaacattccaagtctagtcatttctccattccct
tgccaagctgcctcaggaggaagctttagacagggcacaaggatttgtta
ctggtgaatccagccactgttaaaggctttgaaacaatgaaacagacatc
atggtagaactctaagtttgtttttactggggtacactgttcaagctctt
gatttattcacactgttcggtagctcacctactaatgcagtgccttgacc
tctaacacactaagtgacaacagggccacttgtttctcttgttctttgat
ttgctttgacattaactaaattattctcagagggaatgctgtcgccccct
aggggtgaagagaaaattggtgagatgttttagttgttatggtaactgca
gggaagtctgggctcctggtttttaaggggctaccagcattgacagcaga
tatccaaaacttgtgagaccaatgcacagcacaatgaccgattctgcctc
ctgatataagcctagacagaccaaatggctaagaaattcaatttctctgc
acacagagtcaacacctgtggtttcccaggaacgtgacagtgtgtacact
caaggaagaacgtatgtcatttgatttggaatgtgcgaaagagttttgga
aaaggtggtcccagacagaaacactcattaacatgtaacactcattgtgg
ctggggcctagcctgaatttcagctgcaggtttcctggtaattctcgcct
ctcaaggatatagcacttcatacctactcatatgtctgcagtatggcact
ggccaagtattccttatgaacacatggctttatatataaa
agtggtcagctgacccaacagagacttttccttgattggagttcatggcc
taataaggaggagagctgttaagcagattagtgcaaatgagattaatcta
ctgcaaaagtgcataggaatgctgaagccatgctctagcttcatcatcta
ctggatagctctctggagcagagaactcagggcctggggtgttagagggg
gagggtggaagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_104397972_104399166
seq2: B6Ng01-163D14.b_44_1233 (reverse)

seq1  TTTATA-ATAAAAGCATGTGTTTCAATAAAGAAATACTTGGGCATGACCA  49
      |||||| |||||  |||||| ||||   ||| ||||||||| ||   |||
seq2  TTTATATATAAAGCCATGTG-TTCA--TAAGGAATACTTGGCCAGTGCCA  47

seq1  TACTGCAGGACATAATGAGTAAGTAATGAGATGACTATA--CCTGAGAG-  96
      ||||||| ||||| ||||||| || ||||  || |||||  | |||||| 
seq2  TACTGCA-GACAT-ATGAGTAGGT-ATGAAGTG-CTATATCCTTGAGAGG  93

seq1  -CAGAATTACCAGGAAAAACTGCAGCTGAAAATACAGGCTA-GCCCCAGC  144
        |||||||||||| ||| ||||||||| |||| ||||||| ||||||||
seq2  CGAGAATTACCAGG-AAACCTGCAGCTG-AAATTCAGGCTAGGCCCCAGC  141

seq1  CACAATGAGTGTTAACTGTTAATGAGTGTTTCTGTCTGGGACCACCCTTT  194
      ||||||||||||||  |||||||||||||||||||||||||||| |||||
seq2  CACAATGAGTGTTACATGTTAATGAGTGTTTCTGTCTGGGACCA-CCTTT  190

seq1  TCCAAAACTCTTTCGCACATTCCAAATCAAATGACATACGTTCTTCCTTG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAACTCTTTCGCACATTCCAAATCAAATGACATACGTTCTTCCTTG  240

seq1  AGTGTACACACTTGTCACGTTCCTGGGAAACCACAGGTGTTGACTCTGTG  294
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGTGTACACAC-TGTCACGTTCCTGGGAAACCACAGGTGTTGACTCTGTG  289

seq1  TGCAGAGAAATTGAATTTCTTAGCCATTTGGTCTGTCTAGGCTTATATCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAAATTGAATTTCTTAGCCATTTGGTCTGTCTAGGCTTATATCA  339

seq1  GGAGGCAGAATCGGTCATTGTGCTGTGCATTGGTCTCACAAGTTTTGGAT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGAATCGGTCATTGTGCTGTGCATTGGTCTCACAAGTTTTGGAT  389

seq1  ATCTGCTGTCAATGCTGGTAGCCCCTTAAAAACCAGGAGCCCAGACTTCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTGTCAATGCTGGTAGCCCCTTAAAAACCAGGAGCCCAGACTTCC  439

seq1  CTGCAGTTACCATAACAACTAAAACATCTCACCAATTTTCTCTTCACCCC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGTTACCATAACAACTAAAACATCTCACCAATTTTCTCTTCACCCC  489

seq1  TAGGGGGCGACAGCATTCCCTCTGAGAATAATTTAGTTAATGTCAAAGCA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGGCGACAGCATTCCCTCTGAGAATAATTTAGTTAATGTCAAAGCA  539

seq1  AATCAAAGAACAAGAGAAACAAGTGGCCCTGTTGTCACTTAGTGTGTTAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAAGAACAAGAGAAACAAGTGGCCCTGTTGTCACTTAGTGTGTTAG  589

seq1  AGGTCAAGGCACTGCATTAGTAGGTGAGCTACCGAACAGTGTGAATAAAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAGGCACTGCATTAGTAGGTGAGCTACCGAACAGTGTGAATAAAT  639

seq1  CAAGAGCTTGAACAGTGTACCCCAGTAAAAACAAACTTAGAGTTCTACCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCTTGAACAGTGTACCCCAGTAAAAACAAACTTAGAGTTCTACCA  689

seq1  TGATGTCTGTTTCATTGTTTCAAAGCCTTTAACAGTGGCTGGATTCACCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTGTTTCATTGTTTCAAAGCCTTTAACAGTGGCTGGATTCACCA  739

seq1  GTAACAAATCCTTGTGCCCTGTCTAAAGCTTCCTCCTGAGGCAGCTTGGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAATCCTTGTGCCCTGTCTAAAGCTTCCTCCTGAGGCAGCTTGGC  789

seq1  AAGGGAATGGAGAAATGACTAGACTTGGAATGTTGACTTGATCCAGCTTC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAATGGAGAAATGACTAGACTTGGAATGTTGACTTGATCCAGCTTC  839

seq1  AGTCGGTTGAGGGGCAGTTGAATTGAGACTAGAACCAGGTACTCTCGTAT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGTTGAGGGGCAGTTGAATTGAGACTAGAACCAGGTACTCTCGTAT  889

seq1  ATGATCACTGTGGGCTCAGAAGAGTCGCTGACATGAACCATGATGTTATC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCACTGTGGGCTCAGAAGAGTCGCTGACATGAACCATGATGTTATC  939

seq1  ATTGCTACGGCACCTGTCAATCATCCTTTTTCGTGTTGCTAGCATACCCT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTACGGCACCTGTCAATCATCCTTTTTCGTGTTGCTAGCATACCCT  989

seq1  GAATCCTCTCCTGTTTCATTCTGATCTCACCGTTTTTGCACCTATAGTTT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCTCTCCTGTTTCATTCTGATCTCACCGTTTTTGCACCTATAGTTT  1039

seq1  TATTCTGGCAGTCATTTGAAGTGCTTCTTTGGGCAAAGCTAGCTTCTCTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGGCAGTCATTTGAAGTGCTTCTTTGGGCAAAGCTAGCTTCTCTA  1089

seq1  CCTTCTGCCCCGACTGAACAGCCACATGTCTCTTAGGCTTAGGTGTCCAT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTGCCCCGACTGAACAGCCACATGTCTCTTAGGCTTAGGTGTCCAT  1139

seq1  GTATGTGTCCCCATGAGAACCATGAGGACCACTGGAAGCATGTAAGAATT  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGTCCCCATGAGAACCATGAGGACCACTGGAAGCATGTAAGAATT  1189

seq1  C  1195
      |
seq2  C  1190

seq1: chr4_104270941_104271153
seq2: B6Ng01-163D14.g_73_285

seq1  AGTGGTCAGCTGACCCAACAGAGACTTTTCCTTGATTGGAGTTCATGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCAGCTGACCCAACAGAGACTTTTCCTTGATTGGAGTTCATGGCC  50

seq1  TAATAAGGAGGAGAGCTGTTAAGCAGATTAGTGCAAATGAGATTAATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGGAGGAGAGCTGTTAAGCAGATTAGTGCAAATGAGATTAATCTA  100

seq1  CTGCAAAAGTGCATAGGAATGCTGAAGCCATGCTCTAGCTTCATCATCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAAAGTGCATAGGAATGCTGAAGCCATGCTCTAGCTTCATCATCTA  150

seq1  CTGGATAGCTCTCTGGAGCAGAGAACTCAGGGCCTGGGGTGTTAGAGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATAGCTCTCTGGAGCAGAGAACTCAGGGCCTGGGGTGTTAGAGGGG  200

seq1  GAGGGTGGAAGGA  213
      |||||||||||||
seq2  GAGGGTGGAAGGA  213