BAC Information

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BAC

Clone NameB6Ng01-164D21
Chromosome4 (Build37)
Map Location 18,508,356 - 18,509,499
singlet/doubletsinglet
Overlap genenone
Upstream geneMmp16
Downstream geneLOC667251, LOC435772, Cngb3, LOC623122, Cpne3, LOC100040306, 2410005O16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164D21.bB6Ng01-164D21.g
ACCDH956619DH956620
length1,126616
definitionDH956619|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D21, 5' end.DH956620|Mus musculus domesticus DNA, BAC clone: B6Ng01-164D21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctattaattatgcttcaacatgctacattggtttttgaaaaatg
ctacatagctccaaacagtgatgatgacaattggttaaatggacagtgtg
tcaattctctcagttatatacataaattgaagaagaagatgtatttctct
gtgtgttttacacaaaatattgtctgtttttacctggtctttctgaacaa
actgatgacttccatgagagaggattgacaaaactgataatgtatagatt
ttagaatatagtttatttaaaatatcatgttagaacaatttaaggggtga
ataaagaaaacaatcatagtattgcttgaagaaaggaacgtcaaacctag
aaagaattaagatgggcatgataccagtgagttctctctcagagaaccac
ccttcaacactttcttattaagaaaagcactaatatgcttcatcaagcta
cttcataatgtctcacagctgactggtgtgatcatcacatcaggtcatta
ggatcatgatttgaacaagatttacggtcagcttgcctgaaagactatag
aaaattgaagaatattgcttcctttcatagatctttgatgaaaataagtt
cttggtactatcagataatttcctggaatcttttcctataactgatccta
gtttattccttgtctagacaaatatctgctgcctagtaacattaacaaac
aaaaacatacagtagataacaccaagaagctctatctctaacaagatgta
gttttaattatgtcatgtaagattctaatatctattagctgaactggagt
ccaaggtgaaggtattgccaacatgggtgttctattcataaaggtggaat
ttcaatgcattagatggagcccattctcaacactacttatggttaagatc
ctgagaccatatatccagtcgcccttgcttaaagcaaatgatacttatct
ttaaaaaggtagtgataaacaactcctatgatatcctttacactcactta
tcagtgcctgatcagctatgatgggtatagctgcagagctgcagagaaag
aacaatatagagattccagcatatattaccagagacgaactcatataact
cacagaactgagcagcatgccaaggc

gaattcagctcaagggcaggccttaagacatgacactattactgaggcta
tagtgtgttcacaaaaagagaccttatgactgccctctgaaagacccaac
aagcagctgaaagagtcagatgcagatatttgtacccaaccaatgtacag
aagctgctgacccctgttgaattgggggaaagctgaagaaacagaggagg
gcaaccttgtaggaagaacagaagtctcaattgacctggacccctgagat
ctctcagacactggaccaccacccagtcagcatacaccagataatatgag
gtccccaacacatatactgcagaggattgctaggtctggttttagtcaga
gaagatgcatataacccccaagatactggtggctccagggagtttaccgg
tctggagtggtaaggagtagtgggtacggatatccttgtggagactgggg
gtaggagtggggaggatgtatatattcccgatggctgtgggagccactgc
agagaggggtctgattgtctattagctggagaaccatccctctgagtttc
atgagaatcgagtctcccctgaagcaccaggtggggtgcccacatcttct
gagaatcttcacggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_18508356_18509499
seq2: B6Ng01-164D21.b_45_1170

seq1  GAATTCCTATTAATTATGCTTCAACATGCTACATTGGTTTTTGAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATTAATTATGCTTCAACATGCTACATTGGTTTTTGAAAAATG  50

seq1  CTACATAGCTCCAAACAGTGATGATGACAATTGGTTAAATGGACAGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATAGCTCCAAACAGTGATGATGACAATTGGTTAAATGGACAGTGTG  100

seq1  TCAATTCTCTCAGTTATATACATAAATTGAAGAAGAAGATGTATTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCTCTCAGTTATATACATAAATTGAAGAAGAAGATGTATTTCTCT  150

seq1  GTGTGTTTTACACAAAATATTGTCTGTTTTTACCTGGTCTTTCTGAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTTTACACAAAATATTGTCTGTTTTTACCTGGTCTTTCTGAACAA  200

seq1  ACTGATGACTTCCATGAGAGAGGATTGACAAAACTGATAATGTATAGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGACTTCCATGAGAGAGGATTGACAAAACTGATAATGTATAGATT  250

seq1  TTAGAATATAGTTTATTTAAAATATCATGTTAGAACAATTTAAGGGGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATATAGTTTATTTAAAATATCATGTTAGAACAATTTAAGGGGTGA  300

seq1  ATAAAGAAAACAATCATAGTATTGCTTGAAGAAAGGAACGTCAAACCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAAACAATCATAGTATTGCTTGAAGAAAGGAACGTCAAACCTAG  350

seq1  AAAGAATTAAGATGGGCATGATACCAGTGAGTTCTCTCTCAGAGAACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATTAAGATGGGCATGATACCAGTGAGTTCTCTCTCAGAGAACCAC  400

seq1  CCTTCAACACTTTCTTATTAAGAAAAGCACTAATATGCTTCATCAAGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAACACTTTCTTATTAAGAAAAGCACTAATATGCTTCATCAAGCTA  450

seq1  CTTCATAATGTCTCACAGCTGACTGGTGTGATCATCACATCAGGTCATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATAATGTCTCACAGCTGACTGGTGTGATCATCACATCAGGTCATTA  500

seq1  GGATCATGATTTGAACAAGATTTACGGTCAGCTTGCCTGAAAGACTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATGATTTGAACAAGATTTACGGTCAGCTTGCCTGAAAGACTATAG  550

seq1  AAAATTGAAGAATATTGCTTCCTTTCATAGATCTTTGATGAAAATAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTGAAGAATATTGCTTCCTTTCATAGATCTTTGATGAAAATAAGTT  600

seq1  CTTGGTACTATCAGATAATTTCCTGGAATCTTTTCCTATAACTGATCCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTACTATCAGATAATTTCCTGGAATCTTTTCCTATAACTGATCCTA  650

seq1  GTTTATTCCTTGTCTAGACAAATATCTGCTGCCTAGTAACATTAACAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCCTTGTCTAGACAAATATCTGCTGCCTAGTAACATTAACAAAC  700

seq1  AAAAACATACAGTAGATAACACCAAGAAGCTCTATCTCTAACAAGATGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATACAGTAGATAACACCAAGAAGCTCTATCTCTAACAAGATGTA  750

seq1  GTTTTAATTATGTCATGTAAGATTCTAATATCTATTAGCTGAACTGGAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAATTATGTCATGTAAGATTCTAATATCTATTAGCTGAACTGGAGT  800

seq1  CCAAGGTGAAGGTATTGCCAACATGGGTGTTCTATTCATAAAGGTGGAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTGAAGGTATTGCCAACATGGGTGTTCTATTCATAAAGGTGGAAT  850

seq1  TTCAATGCATTAGATGGAGCCCATTCTCAACACTACTTATGGTTAAGATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGCATTAGATGGAGCCCATTCTCAACACTACTTATGGTTAAGATC  900

seq1  CTGAGACCATATATCCAGTCGCCCTTGCTTAAAAGCAAATGATACTTATC  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTGAGACCATATATCCAGTCGCCCTTGCTT-AAAGCAAATGATACTTATC  949

seq1  TTTTAAAAAGGTAGTGATAAAACAACTCCTAATGATATCCTTTTACACTC  1000
       ||||||||||||||||| ||||||||||| ||||||||| |||||||||
seq2  -TTTAAAAAGGTAGTGAT-AAACAACTCCT-ATGATATCC-TTTACACTC  995

seq1  ACTTATCAGTGCCTTGATCAGCTATGATTGGTAATAGCTGCAAGAGGCTG  1050
      ||||||||||||| |||||||||||||| ||| |||||||| ||| ||||
seq2  ACTTATCAGTGCC-TGATCAGCTATGATGGGT-ATAGCTGC-AGA-GCTG  1041

seq1  CAGGAGATAGGAACAAATATAGAGATTCACAGCCATATATTACCCAGAGA  1100
      || |||| | |||| ||||||||||||| ||| ||||||||| |||||||
seq2  CA-GAGA-AAGAAC-AATATAGAGATTC-CAG-CATATATTA-CCAGAGA  1085

seq1  CAGACTCATATAAACTCACAGAAACTGAAGCAGCATGCCCAGGC  1144
      |  |||||||| ||||||||| ||||| ||||||||||| ||||
seq2  CGAACTCATAT-AACTCACAG-AACTG-AGCAGCATGCCAAGGC  1126


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