BAC Information

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BAC

Clone NameB6Ng01-164H10
Chromosome4 (Build37)
Map Location 59,332,053 - 59,423,825
singlet/doubletdoublet
Overlap geneLOC634731, LOC666719
Upstream geneMusk, Edg2, LOC675306, LOC433711, Olfr267, AI314180, LOC100041581, Ltb4dh, 2010203O07Rik, Gng10, AI481877, LOC433712, Ugcg, LOC100041535
Downstream geneRod1, Hsdl2, E130308A19Rik, LOC100041592, 1110054O05Rik, Snx30, Slc46a2, LOC100041656, Mup4, LOC620807, LOC100041658, LOC620846, Mup2, LOC620882, LOC100041687, LOC667221, LOC100038948
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164H10.bB6Ng01-164H10.g
ACCDH956781DH956782
length1,144932
definitionDH956781|Mus musculus domesticus DNA, BAC clone: B6Ng01-164H10, 5' end.DH956782|Mus musculus domesticus DNA, BAC clone: B6Ng01-164H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,332,053 - 59,333,219)(59,422,890 - 59,423,825)
sequence
gaattcagttcccagaacccctgctaaccagcagctcaggaccacctgta
atgacagctccagaggacctgacactccattctggcctctgaaggcactg
ctcctatatggcatacactcacacagacaccgtcacatacacagatataa
aagaaataagaaagtgccctttattttgcatagcatccttggattttggc
tcccagcacgggtttccagtccttggctacaggtctttctcggtttgcta
atcatacaacctcaaagtctacagcagcgctcatgggtgtggctgtacag
tttcatcctctgcgaatgcctaataaaatttacaagtggccactctgaat
gataggctttttatggtcttgccattctcgggctcccctcccttccagtc
tcatgctgtggggccttttattttccctctgaatcatctgcagaatattc
tcttagaaactcatgtgctgttagtcattcttagagaaagtaaatacact
tgaactatagccctcctctctgcagagactctgcttgggagcaaacgcag
cttctctttaatcttttactgatagaaagaccacaggtgttgaagaggaa
gttagaccctgtgacaatcttgacgacttcctctgggtgtgggcattatg
tacacaggtatggtcatttcctgaaagcaactgttgccatccaatggtag
aaataaattaatgccatgattcagtctggcttgggacacatccagagagc
agttggtacattcatttgaacacagaagaataagtaatgatttagtgtgt
tctttttttttctgttattcttttttttaaaatatttatttattttatgt
atacgaatacactgtagttgtctttagacacgccagacgaaaggcgtcag
atcacattgcagatggttgtgagccaccatgtggttgctgggatttgaac
taagaacttcggaagagcagtcagtgctcttaaccactgagcatctctca
gacctttctgtgtattcttatctgactctcacatggcaacaagaaagcgg
gtcaaagaggcgatgatgcagaggtatgtttgtaatgctgattcatttat
ttatctccacactgctcagctaagtcacattagcctcagtcctg
gaattcagctttttaaaaaaatgcaaattcacctttatttatttatgtgt
atatgcatgcatgtgtacaagtgtgtgtgtgtgtgtgtgcgcgcgcgcgc
gcacacgcgcgtttgtctatgtagcggtcagaagacaacctcatggagtc
agttttttccttccctcatgtgagtcctgggatccagttgaggtcatcag
acttggcagcaagccacctttacccgcaaagccataccattggctgtgat
ctcagccctttgatgtgtggataccgacctatttatgtgctgtatgtaac
actatgtgccacatacattctaagcaagttccctgaaactgactctctta
gtccttagacgattcctgtgtgagacactcgggtgagaaggctgccctct
tccaggcgtccaggtcacagtcaggggcagttgtggaattagaagccaga
gatgccagtccgaggctgggttttcagttgctctgctgtttgctttgttt
tttactattgtgattacttttgtactttttactttctcatctctagtgat
ttccagttcaacagttcccgggtttcccaataatcttaaggacgtgttcg
tccatgttcacttttgctttttaaatcagacactaattattttttttgtt
atgccttctaagcatgtaaggtgacttcatatattttgacattaaggtga
ctctgctttttcctttaatcagtaatataagtttcactaacacatttcct
gatagtgattagtgtcattaggatgaattatttttcgaggctttggcttc
ttataattttatcaggatagtatttgctaaataccatttagaattcttca
ctggataaccgaggatgccattttggtatatttagtatcaatgacattct
gaatttaaaatttcaagcatttttttccttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_59332053_59333219
seq2: B6Ng01-164H10.b_47_1190

seq1  GAATTCAGTTCCCAGAACCCCTGCTAACCAGCAGCTCAGGACCACCTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCCCAGAACCCCTGCTAACCAGCAGCTCAGGACCACCTGTA  50

seq1  ATGACAGCTCCAGAGGACCTGACACTCCATTCTGGCCTCTGAAGGCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGCTCCAGAGGACCTGACACTCCATTCTGGCCTCTGAAGGCACTG  100

seq1  CTCCTATATGGCATACACTCACACAGACACCGTCACATACACAGATATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTATATGGCATACACTCACACAGACACCGTCACATACACAGATATAA  150

seq1  AAGAAATAAGAAAGTGCCCTTTATTTTGCATAGCATCCTTGGATTTTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATAAGAAAGTGCCCTTTATTTTGCATAGCATCCTTGGATTTTGGC  200

seq1  TCCCAGCACGGGTTTCCAGTCCTTGGCTACAGGTCTTTCTCGGTTTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGCACGGGTTTCCAGTCCTTGGCTACAGGTCTTTCTCGGTTTGCTA  250

seq1  ATCATACAACCTCAAAGTCTACAGCAGCGCTCATGGGTGTGGCTGTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACAACCTCAAAGTCTACAGCAGCGCTCATGGGTGTGGCTGTACAG  300

seq1  TTTCATCCTCTGCGAATGCCTAATAAAATTTACAAGTGGCCACTCTGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCCTCTGCGAATGCCTAATAAAATTTACAAGTGGCCACTCTGAAT  350

seq1  GATAGGCTTTTTATGGTCTTGCCATTCTCGGGCTCCCCTCCCTTCCAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGCTTTTTATGGTCTTGCCATTCTCGGGCTCCCCTCCCTTCCAGTC  400

seq1  TCATGCTGTGGGGCCTTTTATTTTCCCTCTGAATCATCTGCAGAATATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCTGTGGGGCCTTTTATTTTCCCTCTGAATCATCTGCAGAATATTC  450

seq1  TCTTAGAAACTCATGTGCTGTTAGTCATTCTTAGAGAAAGTAAATACACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAAACTCATGTGCTGTTAGTCATTCTTAGAGAAAGTAAATACACT  500

seq1  TGAACTATAGCCCTCCTCTCTGCAGAGACTCTGCTTGGGAGCAAACGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTATAGCCCTCCTCTCTGCAGAGACTCTGCTTGGGAGCAAACGCAG  550

seq1  CTTCTCTTTAATCTTTTACTGATAGAAAGACCACAGGTGTTGAAGAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTTTAATCTTTTACTGATAGAAAGACCACAGGTGTTGAAGAGGAA  600

seq1  GTTAGACCCTGTGACAATCTTGACGACTTCCTCTGGGTGTGGGCATTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGACCCTGTGACAATCTTGACGACTTCCTCTGGGTGTGGGCATTATG  650

seq1  TACACAGGTATGGTCATTTCCTGAAAGCAACTGTTGCCATCCAATGGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGGTATGGTCATTTCCTGAAAGCAACTGTTGCCATCCAATGGTAG  700

seq1  AAATAAATTAATGCCATGATTCAGTCTGGCTTGGGACACATCCAGAGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTAATGCCATGATTCAGTCTGGCTTGGGACACATCCAGAGAGC  750

seq1  AGTTGGTACATTCATTTGAACACAGAAGAATAAGTAATGATTTAGTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTACATTCATTTGAACACAGAAGAATAAGTAATGATTTAGTGTGT  800

seq1  TCTTTTTTTTTCTGTTATTCTTTTTTTTAAAATATTTATTTATTTTATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTTTTTCTGTTATTCTTTTTTTTAAAATATTTATTTATTTTATGT  850

seq1  ATACGAATACACTGTAGTTGTCTTCAGACACGCCAGACG-AAGGCGTCAG  899
      |||||||||||||||||||||||| |||||||||||||| ||||||||||
seq2  ATACGAATACACTGTAGTTGTCTTTAGACACGCCAGACGAAAGGCGTCAG  900

seq1  ATCACATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATTGCAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAC  950

seq1  TCAGGACCTTCGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCT  999
      | | || ||||||||||||||||||||||||||||||||||| |||||||
seq2  T-AAGAACTTCGGAAGAGCAGTCAGTGCTCTTAACCACTGAG-CATCTCT  998

seq1  CCAGACCTTTCTGTGTTATTCTTATCTGACTTCTCCACCATGGGCAACAC  1049
       |||||||||||||| |||||||||||||| ||||   ||| ||||||| 
seq2  -CAGACCTTTCTGTG-TATTCTTATCTGAC-TCTC--ACAT-GGCAACA-  1041

seq1  AGAAAAGCGGGGCAAAGGAGGCGATAGATGCAGAGGTAATGTTTGATAAA  1099
      || |||||||| |||| |||||||| ||||||||||| |||||||   ||
seq2  AG-AAAGCGGGTCAAA-GAGGCGAT-GATGCAGAGGT-ATGTTTG--TAA  1085

seq1  TGCTGAATTCATTTTATTGTAATCTCACACACTGCTCAGCTACAAGCCCA  1149
      ||||| ||||||||  ||   ||||| ||||||||||||||  |||    
seq2  TGCTG-ATTCATTTATTT---ATCTC-CACACTGCTCAGCT--AAG---T  1125

seq1  CCCATTAG-CTCAGTCCTG  1167
      | |||||| ||||||||||
seq2  CACATTAGCCTCAGTCCTG  1144

seq1: chr4_59422890_59423825
seq2: B6Ng01-164H10.g_68_999 (reverse)

seq1  GCAAGGAAAAAAAATGCTTTGATATTTTTAAATTCAGAATGTCATTGATA  50
      |||||| |||||||||| |||| | |||||||||||||||||||||||||
seq2  GCAAGG-AAAAAAATGC-TTGA-AATTTTAAATTCAGAATGTCATTGATA  47

seq1  CTAAATATAACAAAAATGGCATTCCTTCGGTTAT-CAGTGAAGAATTCTA  99
      |||||||| || ||||||||||  | |||||||| |||||||||||||||
seq2  CTAAATAT-ACCAAAATGGCAT--CCTCGGTTATCCAGTGAAGAATTCTA  94

seq1  AATAGTATTTAGCAAATACTATCCTGATTAAAATAATAAGAAGCCAAAGC  149
      ||| ||||||||||||||||||||||| |||||| |||||||||||||||
seq2  AATGGTATTTAGCAAATACTATCCTGA-TAAAATTATAAGAAGCCAAAGC  143

seq1  CTCG-AAAATAATTCATCCTAATGACACTAATCACTATCAGGAAATGTGT  198
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAAAATAATTCATCCTAATGACACTAATCACTATCAGGAAATGTGT  193

seq1  TAGTGAAACTTATATTACTGATTAAAGGAAAAAGCAGAGTCACCTTAATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAACTTATATTACTGATTAAAGGAAAAAGCAGAGTCACCTTAATG  243

seq1  TCAAAATATATGAAGTCACCTTACATGCTTAGAAGGCATAAC-AAAAAAA  297
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCAAAATATATGAAGTCACCTTACATGCTTAGAAGGCATAACAAAAAAAA  293

seq1  TAATTAGTGTCTGATTTAAAAAGCAAAAGTGAACATGGACGAACACGTCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGTGTCTGATTTAAAAAGCAAAAGTGAACATGGACGAACACGTCC  343

seq1  TTAAGATTATTGGGAAACCCGGGAACTGTTGAACTGGAAATCACTAGAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGATTATTGGGAAACCCGGGAACTGTTGAACTGGAAATCACTAGAGA  393

seq1  TGAGAAAGTAAAAAGTACAAAAGTAATCACAATAGTAAAAAACAAAGCAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAGTAAAAAGTACAAAAGTAATCACAATAGTAAAAAACAAAGCAA  443

seq1  ACAGCAGAGCAACTGAAAACCCAGCCTCGGACTGGCATCTCTGGCTTCTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGAGCAACTGAAAACCCAGCCTCGGACTGGCATCTCTGGCTTCTA  493

seq1  ATTCCACAACTGCCCCTGACTGTGACCTGGACGCCTGGAAGAGGGCAGCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACAACTGCCCCTGACTGTGACCTGGACGCCTGGAAGAGGGCAGCC  543

seq1  TTCTCACCCGAGTGTCTCACACAGGAATCGTCTAAGGACTAAGAGAGTCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACCCGAGTGTCTCACACAGGAATCGTCTAAGGACTAAGAGAGTCA  593

seq1  GTTTCAGGGAACTTGCTTAGAATGTATGTGGCACATAGTGTTACATACAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGGAACTTGCTTAGAATGTATGTGGCACATAGTGTTACATACAG  643

seq1  CACATAAATAGGTCGGTATCCACACATCAAAGGGCTGAGATCACAGCCAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAAATAGGTCGGTATCCACACATCAAAGGGCTGAGATCACAGCCAA  693

seq1  TGGTATGGCTTTGCGGGTAAAGGTGGCTTGCTGCCAAGTCTGATGACCTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATGGCTTTGCGGGTAAAGGTGGCTTGCTGCCAAGTCTGATGACCTC  743

seq1  AACTGGATCCCAGGACTCACATGAGGGAAGGAAAAAACTGACTCCATGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGATCCCAGGACTCACATGAGGGAAGGAAAAAACTGACTCCATGAG  793

seq1  GTTGTCTTCTGACCGCTACATAGACAAACGCGCGTGTGCGCGCGCGCGCG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTTCTGACCGCTACATAGACAAACGCGCGTGTGCGCGCGCGCGCG  843

seq1  CACACACACACACACACACTTGTACACATGCATGCATATACACATAAATA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACTTGTACACATGCATGCATATACACATAAATA  893

seq1  AATAAAGGTGAATTTGCATTTTTTTAAAAAGCTGAATTC  936
      |||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGGTGAATTTGCATTTTTTTAAAAAGCTGAATTC  932