BAC Information

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BAC

Clone NameB6Ng01-164L04
Chromosome4 (Build37)
Map Location 54,666,076 - 54,667,123
singlet/doubletsinglet
Overlap geneLOC100041303
Upstream geneLOC666483, Fcmd, Tal2, LOC435784, Tmem38b, LOC670124, LOC100041280, LOC666901
Downstream geneLOC384018, EG666920, Zfp462, LOC670211, Rad23b, LOC666953, LOC100041348, Klf4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-164L04.bB6Ng01-164L04.g
ACCDH956951DH956952
length1,0891,051
definitionDH956951|Mus musculus domesticus DNA, BAC clone: B6Ng01-164L04, 5' end.DH956952|Mus musculus domesticus DNA, BAC clone: B6Ng01-164L04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcaaatgctttctcagcatctaactagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattacgttgatggatttccatatattgaacc
atccctgcatccctggcatgaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattcggttagcaagaacgttattgaggatttttgc
atcaatattcataagggatattggtctgaagttctctatctttgtggggt
ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctgtttctattttgtggaatagtttgtgaagaactgg
gattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctggactttttttggttgggagactattaatgactgcttctatttct
ttgggggatatcaggctgtttagatcattaacctgatattgattcaactt
tggtacctggtctttgtctagaaacttctccatttcatccaggttctcca
gttttgttgagtatagccttttgtagaagtatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttagt
tagaatgctttccctgtgccatctagtgagtctggctaagtgtttgtcta
tcttgttgattttctcaaagaaccagttccttgattggttgattctctga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgctttccttttgatctaaa
gctttaagtgtgttggccagctgctaatatatgctctttctagtttcttt
ttggaggcacctcagagctataaagttttcctctagaaatgctttcattg
gtgtcccataaagtttgggtatgaaggggcttcatttcgttgaacttcta
gaagtccttaaatttcctctcttattcctttccttgacc
gaattctcagcagctggtgtctgacagattatctcattccagacaggcaa
acggtccatggtaaggaaaggctggagcctgaagaggcaatttggcacac
attggggtttcacctctcgatgatggaggtccaagtggcccaccacgtct
gggcctgtgtccctcagagcttctctctggctcatcgcctcccagagctc
ctgacagccatagaaaaggggattattctgtgagctaagccagctcatct
ctcacccctcctctagggcactaatattctaaccagaagaagcaattatg
gtccccactccgcccccaagcccctgcatgcgctctgctctttcaggcgt
ggtacaagctatttcctcaccccccccatgtcttcacctccacagcaaac
tcctgtgttccaaacccatctagagtccttctgcagaagaaagctagtcc
ttgagattcagaagctactaaaacacttagcctgttattttattactcag
tttcacaatcacttgttttctatgaacttctgcactgcagctaggagggt
gttttctaatgaagccaatgtgtagggtactgttataaacacttttcttc
tatggacttgcttggtcctcttaaccctaacagggagagagaaactgggt
cttgatgttgcatgctgggccccagtaaaatttccctgaagtggtggggc
tggaaaagccctgcctcacctctcttcctgaattcaaaacatgccatgca
cccactggccttttggtgcctgttgccttcttacacgagatgctggggga
cctccctcgctgagtgggccattctgaggtttaaaggcaatattctttgt
ctgtctacaggtttgttttcaattgccagtttccttcccaagtggacacc
tcatagagatgacagcaatgcctgcattgttcacacctatcttcccagtt
tctagaacactacttgtcaccctgtaggagtccggccattttttgatgag
tatataatgaacgaattgaagcatagccaagcttatgaggccacagtcta
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_54666076_54667123
seq2: B6Ng01-164L04.g_66_1116

seq1  GAATTCTCAGCAGCTGGTGTCTGACAGATTATCTCATTCCAGACAGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGCAGCTGGTGTCTGACAGATTATCTCATTCCAGACAGGCAA  50

seq1  ACGGTCCATGGTAAGGAAAGGCTGGAGCCTGAAGAGGCAATTTGGCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTCCATGGTAAGGAAAGGCTGGAGCCTGAAGAGGCAATTTGGCACAC  100

seq1  ATTGGGGTTTCACCTCTCGATGATGGAGGTCCAAGTGGCCCACCACGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGTTTCACCTCTCGATGATGGAGGTCCAAGTGGCCCACCACGTCT  150

seq1  GGGCCTGTGTCCCTCAGAGCTTCTCTCTGGCTCATCGCCTCCCAGAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTGTGTCCCTCAGAGCTTCTCTCTGGCTCATCGCCTCCCAGAGCTC  200

seq1  CTGACAGCCATAGAAAAGGGGATTATTCTGTGAGCTAAGCCAGCTCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCCATAGAAAAGGGGATTATTCTGTGAGCTAAGCCAGCTCATCT  250

seq1  CTCACCCCTCCTCTAGGGCACTAATATTCTAACCAGAAGAAGCAATTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCCCTCCTCTAGGGCACTAATATTCTAACCAGAAGAAGCAATTATG  300

seq1  GTCCCCACTCCGCCCCCAAGCCCCTGCATGCGCTCTGCTCTTTCAGGCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCACTCCGCCCCCAAGCCCCTGCATGCGCTCTGCTCTTTCAGGCGT  350

seq1  GGTACAAGCTATTTCCTCACCCCCCCCATGTCTTCACCTCCACAGCAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAAGCTATTTCCTCACCCCCCCCATGTCTTCACCTCCACAGCAAAC  400

seq1  TCCTGTGTTCCAAACCCATCTAGAGTCCTTCTGCAGAAGAAAGCTAGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTTCCAAACCCATCTAGAGTCCTTCTGCAGAAGAAAGCTAGTCC  450

seq1  TTGAGATTCAGAAGCTACTAAAACACTTAGCCTGTTATTTTATTACTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATTCAGAAGCTACTAAAACACTTAGCCTGTTATTTTATTACTCAG  500

seq1  TTTCACAATCACTTGTTTTCTATGAACTTCTGCACTGCAGCTAGGAGGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAATCACTTGTTTTCTATGAACTTCTGCACTGCAGCTAGGAGGGT  550

seq1  GTTTTCTAATGAAGCCAATGTGTAGGGTACTGTTATAAACACTTTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTAATGAAGCCAATGTGTAGGGTACTGTTATAAACACTTTTCTTC  600

seq1  TATGGACTTGCTTGGTCCTCTTAACCCTAACAGGGAGAGAGAAACTGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGACTTGCTTGGTCCTCTTAACCCTAACAGGGAGAGAGAAACTGGGT  650

seq1  CTTGATGTTGCATGCTGGGCCCCAGTAAAATTTCCCTGAAGTGGTGGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGTTGCATGCTGGGCCCCAGTAAAATTTCCCTGAAGTGGTGGGGC  700

seq1  TGGAAAAGCCCTGCCTCACCTCTCTTCCTGAATTCAAAACATGCCATGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAGCCCTGCCTCACCTCTCTTCCTGAATTCAAAACATGCCATGCA  750

seq1  CCCACTGGCCTTTTGGTGCCTGTTGCCTTCTTACACGAGATGCT-GGGGA  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCCACTGGCCTTTTGGTGCCTGTTGCCTTCTTACACGAGATGCTGGGGGA  800

seq1  CCTCCCTCGCTGAGT-GGCCATTCTGAGGTTTAAAGGCAATATTCTTTGT  848
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTCCCTCGCTGAGTGGGCCATTCTGAGGTTTAAAGGCAATATTCTTTGT  850

seq1  CTGTCTACAGGTTTGTTTTCGAATGCCAGTTTCCTTCCCAAGTGGACACC  898
      |||||||||||||||||||| | |||||||||||||||||||||||||||
seq2  CTGTCTACAGGTTTGTTTTCAATTGCCAGTTTCCTTCCCAAGTGGACACC  900

seq1  TCATAGAGATGACAGCAATGCCTGCATTGTTCACACCTATCTTCCCAGTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAGATGACAGCAATGCCTGCATTGTTCACACCTATCTTCCCAGTT  950

seq1  TCTAGAACACTACTTGTCACCCTGTAGGAGTTCGGTCAATTTTTTGATGA  998
      ||||||||||||||||||||||||||||||| ||| | ||||||||||||
seq2  TCTAGAACACTACTTGTCACCCTGTAGGAGTCCGG-CCATTTTTTGATGA  999

seq1  GTATATAATGAACGAATTGAGCAATAG-CAAGC-TATGAGGCCACAGTCT  1046
      ||||||||||||||||||||   |||| ||||| ||||||||||||||||
seq2  GTATATAATGAACGAATTGAAGCATAGCCAAGCTTATGAGGCCACAGTCT  1049

seq1  AT  1048
      ||
seq2  AT  1051