BAC Information

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BAC

Clone NameB6Ng01-167O01
Chromosome4 (Build37)
Map Location 28,822,124 - 28,823,199
singlet/doubletsinglet
Overlap geneEpha7
Upstream geneTpm3-rs2, LOC100040842, LOC100040735, LOC230044, LOC665141, LOC100040773
Downstream geneLOC100040907, LOC100040811
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167O01.bB6Ng01-167O01.g
ACCDH959261DH959262
length7601,080
definitionDH959261|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O01, 5' end.DH959262|Mus musculus domesticus DNA, BAC clone: B6Ng01-167O01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaggcacctgaaaaaatg
tttagcatccttaatcatcagggaaatgcaaatcaaagctgagattccac
ctcacaccagtcagaatggctaagataaaaaaaaatcaggtaacagcaga
tgctggcaaggatgtggagaaagaggaacactcctccattgtgggtggga
ttgcaagcttgtacaaccactctggaaatcagtctggcagttcctcagaa
aattggacatagtactactggaggatcccgcaatacctctcctgggcata
tatccagaagatgttccaaccggtaagaagaacacatgctccactatgtt
catagcagccttatttataatagcaagaatctggaaagaacccagatgtc
cctcaacagaggaatggatacagaaaatgtggtatatttacacaatggag
tactactcagctattaaaaagaatgaatttatgaaattcctaggcaaatg
gatggacgggggggtgggggggagcatcatcctgaatgaggtaacccaat
cacaaaagaactcacatgatatgtactcactgataagtagatattagccc
agaaacttagaatagcccaagatacaagatacaatttgcaaaacacatga
aactcaagaagaacgaagaccaaagtgtggacactttgccccttcttaga
actaggaacaaaacacctattaaataagttacagagactttgttttaatg
ctgaagatga

gaattcacttttccacaggactgacttatgagttctggaacccatgtacc
tgtcacttccactgtatcattatacttcaccctcatttgctctgataaca
ggtgattggtttttagtgattcttctccacatgaggaagtctagtagcca
ctgatttagggactattccttggcaattcttagtctaattttactttgaa
ctagaagagtgtttcatttcttgagatttccttggtctgtctgaatagat
gggacctaattacaaagattttggttaagatgataagaacttgttaaaac
atggtgtgactacattggcacatttgtcttatgtaaaggaaggtacatca
ggacaaacaataaatatgcttgtagctattccactcatcacattaaattt
gtgttttccctttataagtaggcatatcaagttttgttagggtgaaatct
ctcgaaactgtttcttatgctctagtcatctttccctcatggatgatcta
agataccatcattgacttgaggcagaccacgtgtccaaggatacttggag
gtagttttgtttcgtgatgaaacacatgagaaggatgtaaatggaaggac
tcctggagttaagattttaatatttcagttgtagggagctctctttgaaa
acatagctctttatacggatttggtgtgaaaatgtttagtggagcagatg
gagatccagctggtacaatatatgtttgtcagggtatctggcatttagct
acatccaaaaatgctatcaaactgaaagacgctaaagagcagcgctgtgt
ggaagccagtgtgatcagccaggggtagagttctctcatttctgattcct
aaccttgtagggatacattttaacacacacggaattttcgactttaaaat
aaaatctgagaaaaatgtaaataaaattgtcaaacagctgcctttccaac
tcttgatttttgtaggcgaggcaaagcatgctactcctgtgtgaagtggt
agtgttaagaataggctttaatcttaagtggtacaggtaaaccccgtgca
ccttcacaggcctcctcgcatattgaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_28822124_28823199
seq2: B6Ng01-167O01.g_68_1147

seq1  GAATTCACTTTTCCACAGGACTGACTTATGAGTTCTGGAACCCATGTACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTCCACAGGACTGACTTATGAGTTCTGGAACCCATGTACC  50

seq1  TGTCACTTCCACTGTATCATTATACTTCACCCTCATTTGCTCTGATAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTTCCACTGTATCATTATACTTCACCCTCATTTGCTCTGATAACA  100

seq1  GGTGATTGGTTTTTAGTGATTCTTCTCCACATGAGGAAGTCTAGTAGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATTGGTTTTTAGTGATTCTTCTCCACATGAGGAAGTCTAGTAGCCA  150

seq1  CTGATTTAGGGACTATTCCTTGGCAATTCTTAGTCTAATTTTACTTTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTAGGGACTATTCCTTGGCAATTCTTAGTCTAATTTTACTTTGAA  200

seq1  CTAGAAGAGTGTTTCATTTCTTGAGATTTCCTTGGTCTGTCTGAATAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAGAGTGTTTCATTTCTTGAGATTTCCTTGGTCTGTCTGAATAGAT  250

seq1  GGGACCTAATTACAAAGATTTTGGTTAAGATGATAAGAACTTGTTAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACCTAATTACAAAGATTTTGGTTAAGATGATAAGAACTTGTTAAAAC  300

seq1  ATGGTGTGACTACATTGGCACATTTGTCTTATGTAAAGGAAGGTACATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGTGACTACATTGGCACATTTGTCTTATGTAAAGGAAGGTACATCA  350

seq1  GGACAAACAATAAATATGCTTGTAGCTATTCCACTCATCACATTAAATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAACAATAAATATGCTTGTAGCTATTCCACTCATCACATTAAATTT  400

seq1  GTGTTTTCCCTTTATAAGTAGGCATATCAAGTTTTGTTAGGGTGAAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTCCCTTTATAAGTAGGCATATCAAGTTTTGTTAGGGTGAAATCT  450

seq1  CTCGAAACTGTTTCTTATGCTCTAGTCATCTTTCCCTCATGGATGATCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGAAACTGTTTCTTATGCTCTAGTCATCTTTCCCTCATGGATGATCTA  500

seq1  AGATACCATCATTGACTTGAGGCAGACCACGTGTCCAAGGATACTTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCATCATTGACTTGAGGCAGACCACGTGTCCAAGGATACTTGGAG  550

seq1  GTAGTTTTGTTTCGTGATGAAACACATGAGAAGGATGTAAATGGAAGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTTGTTTCGTGATGAAACACATGAGAAGGATGTAAATGGAAGGAC  600

seq1  TCCTGGAGTTAAGATTTTAATATTTCAGTTGTAGGGAGCTCTCTTTGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAGTTAAGATTTTAATATTTCAGTTGTAGGGAGCTCTCTTTGAAA  650

seq1  ACATAGCTCTTTATACGGATTTGGTGTGAAAATGTTTAGTGGAGCAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCTCTTTATACGGATTTGGTGTGAAAATGTTTAGTGGAGCAGATG  700

seq1  GAGATCCAGCTGGTACAATATATGTTTGTCAGGGTATCTGGCATTTAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCCAGCTGGTACAATATATGTTTGTCAGGGTATCTGGCATTTAGCT  750

seq1  ACATCCAAAAATGCTATCAAACTGAAAGACGCTAAAGAGCAGCGCTGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCAAAAATGCTATCAAACTGAAAGACGCTAAAGAGCAGCGCTGTGT  800

seq1  GGAAGCCAGTGTGATCAGCCAGGGGTAGAGTTCTCTCATTTCTGATTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAGTGTGATCAGCCAGGGGTAGAGTTCTCTCATTTCTGATTCCT  850

seq1  AACCTTGTAGGGATACATTTTAACACACACGGAATTTTCGACTTTAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AACCTTGTAGGGATACATTTTAACACACACGGAATTTTCGACTTT-AAAA  899

seq1  TAAAATCTGAGAAAAATGTAAATAAAATTGTCAAACAGCTGCCTTTCCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTGAGAAAAATGTAAATAAAATTGTCAAACAGCTGCCTTTCCAA  949

seq1  CTCTTGATTTTTGTAGGCGAGGCAAAGCATGCTACT-CTGTGTTGAAGT-  998
      |||||||||||||||||||||||||||||||||||| ||||| |||||| 
seq2  CTCTTGATTTTTGTAGGCGAGGCAAAGCATGCTACTCCTGTG-TGAAGTG  998

seq1  GTAGTGTTTAAAGAATAGGCTGT-ATCTTAAGT-GTACA-GTAAA-CACG  1044
      ||||||||  ||||||||||| | ||||||||| ||||| ||||| | ||
seq2  GTAGTGTT--AAGAATAGGCTTTAATCTTAAGTGGTACAGGTAAACCCCG  1046

seq1  TGCA-CTTCACAGGGCTTCT-GCATATTGAAAAC  1076
      |||| ||||||||| || || |||||||||||||
seq2  TGCACCTTCACAGGCCTCCTCGCATATTGAAAAC  1080


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