BAC Information

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BAC

Clone NameB6Ng01-169B01
Chromosome4 (Build37)
Map Location 38,363,770 - 38,364,909
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC277771, LOC100039448
Downstream geneLOC665520, LOC100039487
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169B01.bB6Ng01-169B01.g
ACCDH960140DH960141
length1,1371,194
definitionDH960140|Mus musculus domesticus DNA, BAC clone: B6Ng01-169B01, 5' end.DH960141|Mus musculus domesticus DNA, BAC clone: B6Ng01-169B01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgttgtataatcttggggctattacaaacataaatacggaaa
aaatataagcttaaactcttttttccttcttcgtcaatgacaaccagtca
cagttgtaatttttcacaattttttactgttttattcaggatggtaagta
agcatcataaaattacaaattagctagaagcacatattaattcctaagat
gattcttagaaaagcagatgtcttccctctcctaggacatttcaaattaa
ttagccaagatgaagtatcagcagtagcattttgaaaaatcctccagcta
attatactctacacatatagttcaacattgttattagagacttattcttg
ggttatcatcaaatggatgagaggtcgtcttcagctatgacttaaatgag
tgaagatcagtcctgagggcattttggaggacagtattggcaaagcagta
agccacactagatgtactggttttcatgtttggcattgtagttgcagaat
ccaaatagtaagcctacaatagttcaagcgttttagcttgtttaaaaaca
aaacaaaatctcattaaggttaccaaaaaatttttatttttagttattca
tatactgttactttctcactaaaaacgaactgatctcacaaaaatcccct
ctgctttttgccacacctgtttagccataactgttggaaaaacaaaaatt
agacaaacaaacaaaaatgaaaaatgctaattatcatgttaatgcagaag
gttctattggttcaacaactattcaggaagttcttaaatgaaaggcagca
aaatgcaaaaattttagcttttattatttagagcctcaacggtgatctac
tcttcgcccttgaatgtatcactgaaagtatcagtaaattcaaaaacaaa
tgggtatctgctaaatagatatcacaggatatggacagctttctcaaatt
tctaacttggatttaactctgtctttaagccaggaaacataaaagacttt
ctactgactcagagagatatttactaatgttcatttctatcttatagact
ttcaagtcaaatatggtgaaagtaccaccagtttcagaatgacatttatt
tggaactgattgcttggtatattttctaaggaacatc
gaattccttctaccttaacggtggtgggtgtagtcaatagcaccaggtag
ggtcccttccaccatggcttgaggttccctgctcaatgccttctcaccag
gacagtgtctcccacttcaaactgatgtggcacctgcaagtcgccagcta
cataggtctctttcaactgctcccagatttctttcctcatggtttcaagg
gccttcagctgggctagaaggtgagatgagggaatggaggaagcatcagg
acaagttctattttctacagtcacatagatggatggggcgccccaaacat
tagtttgaaaggtgttagacctgaggttccgggggtgttccggacccaga
atagggcataagggagaagggctgtccaatcattcccgtcggtctctaag
gtcaatttagtgaaggtctcttagagttctattcattctttctacctgtc
ctgaactctggggtctgtaagcacaatgtagcttccaatttatccccagc
tgtctggccaatccctggcttacctgggagacgaaggcaggccagttgtc
tgacccaagtacctttggtaccccgaaacagggaaagatttctttaagta
tcttcttggccaccacattagccatttccctcttggtggggaatgcttca
gtccaccctgaaaggtatctacaaaaactagaaggtacttatttctataa
cgggttgccttgacctaagtaaagtcaacctcccagtaagtcccaggcct
atctcctagtatgcatcttccaccatggtacttattggacccaacattgg
tgagggcacctgctcgacaattcttcactaaatcttctactgcctttgta
gtctaggggatttgataggagatctattaactagctctgtcatctttttg
ggtcccaggtgagtgagtcagtgtaagactagccaatagtctagcccctc
tcttctgtgagggttcttttttctgtgtctctcaacagctggatgtggtt
ttattacaaagtcattgacccctgtggctgctttagcactggtctgcatc
gaattcttctatggtcggttcctttgatgctgggcatgatattcactact
tacgagcaatgaacagctctggaattcctctcattgtaagcttccagtag
tccagtcaacgtcttgagagtgtctgtgtacgtagggtaccatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_38363770_38364909
seq2: B6Ng01-169B01.b_45_1181

seq1  GAATTCTCTGTTGTATAATCTTGGGGCTATTACAAACATAAATACGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTGTATAATCTTGGGGCTATTACAAACATAAATACGGAAA  50

seq1  AAATATAAGCTTAAACTCTTTTTTCCTTCTTCGTCAATGACAACCAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATAAGCTTAAACTCTTTTTTCCTTCTTCGTCAATGACAACCAGTCA  100

seq1  CAGTTGTAATTTTTCACAATTTTTTACTGTTTTATTCAGGATGGTAAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGTAATTTTTCACAATTTTTTACTGTTTTATTCAGGATGGTAAGTA  150

seq1  AGCATCATAAAATTACAAATTAGCTAGAAGCACATATTAATTCCTAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATAAAATTACAAATTAGCTAGAAGCACATATTAATTCCTAAGAT  200

seq1  GATTCTTAGAAAAGCAGATGTCTTCCCTCTCCTAGGACATTTCAAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTTAGAAAAGCAGATGTCTTCCCTCTCCTAGGACATTTCAAATTAA  250

seq1  TTAGCCAAGATGAAGTATCAGCAGTAGCATTTTGAAAAATCCTCCAGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCAAGATGAAGTATCAGCAGTAGCATTTTGAAAAATCCTCCAGCTA  300

seq1  ATTATACTCTACACATATAGTTCAACATTGTTATTAGAGACTTATTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTCTACACATATAGTTCAACATTGTTATTAGAGACTTATTCTTG  350

seq1  GGTTATCATCAAATGGATGAGAGGTCGTCTTCAGCTATGACTTAAATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATCATCAAATGGATGAGAGGTCGTCTTCAGCTATGACTTAAATGAG  400

seq1  TGAAGATCAGTCCTGAGGGCATTTTGGAGGACAGTATTGGCAAAGCAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATCAGTCCTGAGGGCATTTTGGAGGACAGTATTGGCAAAGCAGTA  450

seq1  AGCCACACTAGATGTACTGGTTTTCATGTTTGGCATTGTAGTTGCAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACACTAGATGTACTGGTTTTCATGTTTGGCATTGTAGTTGCAGAAT  500

seq1  CCAAATAGTAAGCCTACAATAGTTCAAGCGTTTTAGCTTGTTTAAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATAGTAAGCCTACAATAGTTCAAGCGTTTTAGCTTGTTTAAAAACA  550

seq1  AAACAAAATCTCATTAAGGTTACCAAAAAATTTTTATTTTTAGTTATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAATCTCATTAAGGTTACCAAAAAATTTTTATTTTTAGTTATTCA  600

seq1  TATACTGTTACTTTCTCACTAAAAACGAACTGATCTCACAAAAATCCCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTTACTTTCTCACTAAAAACGAACTGATCTCACAAAAATCCCCT  650

seq1  CTGCTTTTTGCCACACCTGTTTAGCCATAACTGTTGGAAAAACAAAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTTGCCACACCTGTTTAGCCATAACTGTTGGAAAAACAAAAATT  700

seq1  AGACAAACAAACAAAAATGAAAAATGCTAATTATCATGTTAATGCAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAACAAACAAAAATGAAAAATGCTAATTATCATGTTAATGCAGAAG  750

seq1  GTTCTATTGGTTCAACAACTATTCAGGAAGTTCTTAAATGAAAGGCAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATTGGTTCAACAACTATTCAGGAAGTTCTTAAATGAAAGGCAGCA  800

seq1  AAATGCAAAAATTTTAGCTTTTATTATTTAGAGCCTCAACGGTGATCTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAAAATTTTAGCTTTTATTATTTAGAGCCTCAACGGTGATCTAC  850

seq1  TCTTCGCCCTTGAATGTATCACTGAAAGTATCAGTAAATTTCAAAAACAA  900
      |||||||||||||||||||||||||||||||||||||| ||||||||| |
seq2  TCTTCGCCCTTGAATGTATCACTGAAAGTATCAGTAAA-TTCAAAAAC-A  898

seq1  AATGGGTATCTGCTAAATAGATATCACAGGATATGGACAGCTTTCTCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTATCTGCTAAATAGATATCACAGGATATGGACAGCTTTCTCAAA  948

seq1  TTTCTAACTTGAATTTAAACTCTGTCTTTAAGCCAGGAAACATAAAAGAC  1000
      ||||||||||| |||| |||||||||||||||||||||||||||||||||
seq2  TTTCTAACTTGGATTT-AACTCTGTCTTTAAGCCAGGAAACATAAAAGAC  997

seq1  TTTCTACTGACTCAGAGAGATATTTACTAATGTTCA-TTCTATC-TATAG  1048
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TTTCTACTGACTCAGAGAGATATTTACTAATGTTCATTTCTATCTTATAG  1047

seq1  ACTTTCAAGTCAGATGATGTTGAAAGTTACCA-CAGTTTCAGAATGACAA  1097
      |||||||||||| || ||| |||||| ||||| ||||||||||||||| |
seq2  ACTTTCAAGTCAAAT-ATGGTGAAAG-TACCACCAGTTTCAGAATGAC-A  1094

seq1  TTTATTTTGAACTGATTGCTTGTGTATATTTTCTAA-GAACATC  1140
      ||||||| |||||||||||||| ||||||||||||| |||||||
seq2  TTTATTTGGAACTGATTGCTTG-GTATATTTTCTAAGGAACATC  1137