BAC Information

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BAC

Clone NameB6Ng01-175L08
Chromosome4 (Build37)
Map Location 126,657,080 - 126,657,533
singlet/doubletsinglet
Overlap genenone
Upstream geneCsf3r, Mrps15, 1810007P19Rik, LOC100039645, Lsm10, Stk40, 2610027C15Rik, 1700029G01Rik, Thrap3, Mtap7d1, Trappc3, Col8a2, EG667193, Adprhl2, Tekt2, Eif2c3, Eif2c1, LOC100039351, Eif2c4, Clspn, LOC665197, 5730409E04Rik, LOC620877, Psmb2, Tcfap2e, Ncdn, AU040320
Downstream geneSfpq, Zmym1, LOC665245, Zmym6, LOC100039968, LOC621588, Dlgap3, BC003266, Gja4, Gjb3, Gjb4, Gjb5, LOC667296, LOC635169
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175L08.bB6Ng01-175L08.g
ACCGA003441GA003442
length822991
definitionB6Ng01-175L08.b B6Ng01-175L08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtcttgacctaattttcactcagtagtaagttgtacagcttcc
atgagttttcatatattttgccatttctattgttgttggtatccaaatgg
tcagatagaatataagatattatttcaagtttttaaaatgatatttgaga
cttgctttatgccctaatatgtgggcaattttggagaaaggtctatgggg
tgctgagaagaatgtatgttttttagtgtttcggtggaatgtcccatagc
tgtttattaggtctatttgactttgatatgatttaactccagcagaatct
ccatctagttttggtattgatgaccttactattgcaagagttgggtatta
atcacccaatatcactatgtttaatatagcttagtatcacctattgccag
catgtgatattagctgcagtcatgcttttttttttttttttttaggaacc
tttgtatttggtgcctaaacatttataattataatatcttcttgatcaat
attttttaatgagtatttagtgttccttcatatcttctgattaggttttg
tttgaagtctgttttgtcagacatcaaaataactacatatgcttgatttg
cttataatactttttccattcttttactgtcaaattgtttctatccttgg
tggtgatgtgtgtttcttggttgcagcagaaagatagatcctgcctgagg
caggcagatttctgagttcgaggccatcctggtctacagagtggagtgag
ttacaggacagccagggctacacaaagaaaccctgtctcgaaaaacagaa
aacaaaacaaacaaacaaacaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatactggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtttcgcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaaatgggaa
ctcacatgccagaattggagaaaaatgtatattcctgctagctgcccacc
tagctgcaaatgtatggcccacctagctgcaaactatgctgatgactaga
ataacagccatggggacctagatcctgcttctgatacccatgttaggtca
cagataacctatgctaagatagtgtgtgcacaacctcatggcattttaca
ggaagagtagtttttctcaataaatcttatcagcttaacagagagttatc
tttataagtttttcataatgaataaatgggtcctttgagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_126657080_126657533
seq2: B6Ng01-175L08.b_473_870

seq1  CTTTTTTTTTTTTTTTT---------TTTTTTTTTGGTTTTTTCAAGACA  41
      |||||||||||||||||         ||| | |||||   |  | | |||
seq2  CTTTTTTTTTTTTTTTTTTAGGAACCTTTGTATTTGG---TGCCTAAACA  47

seq1  GGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAG  91
         ||| |   ||||        | | || ||  ||| | | |       
seq2  ---TTTATAATTATA-----ATATCTTCTTGA--TCAATATTT-------  80

seq1  GCTGGCCTCGAACTCAGAAATCCGCCTGCCT--CTGCCTCCCGAGT--GC  137
             |  || | || | |  |  | |||   |  || | || |  | 
seq2  -------TTTAA-TGAGTATTTAGTGTTCCTTCATATCTTCTGATTAGGT  122

seq1  TGGGATTAAAGGCGTGCGCCACCACGCCCGGCCCGATGCCCTCTTTTGAC  187
      |  | || |||                             || ||||| |
seq2  TTTGTTTGAAG----------------------------TCTGTTTTGTC  144

seq1  CTTCATGAACATCACGCACACAAGTGACACAGGC---AAACACTCATACA  234
         ||| || || ||  ||| | |    |   ||    || |||  | | 
seq2  AGACATCAAAATAAC-TACATATGCTTGATTTGCTTATAATACTTTTTC-  192

seq1  CATAAAAATAAAGTAAACCTAAAAAAAAATGTTTTAGGCCAGGCAGTGGT  284
      |||     ||  ||           ||| |||||     |   |  ||||
seq2  CATTCTTTTACTGT----------CAAATTGTTT-----CTATCCTTGGT  227

seq1  GGT-ATATGCCTTTAATCCTAGCACTTGGGAG---GA----GGCAGAGGC  326
      ||| || ||  |||  |  | |||   |  ||   ||    | | |||||
seq2  GGTGATGTGTGTTTCTTGGTTGCAGCAGAAAGATAGATCCTGCCTGAGGC  277

seq1  AGGCAGATTTCTGAGTTCAAGGCCAGCCTGGTCTACA-----GAGTGAGT  371
      |||||||||||||||||| |||||| |||||||||||     ||||||||
seq2  AGGCAGATTTCTGAGTTCGAGGCCATCCTGGTCTACAGAGTGGAGTGAGT  327

seq1  TCCAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGGGAAAACCAAA  421
      | ||||||||||||||||||||| |||||||||||||||        |||
seq2  TACAGGACAGCCAGGGCTACACAAAGAAACCCTGTCTCG-------AAAA  370

seq1  ACCAAAACCAAAACCCAAAAAACAAACAAACAA  454
      ||  ||| ||||||     ||||||||||||||
seq2  ACAGAAAACAAAAC-----AAACAAACAAACAA  398