BAC Information

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BAC

Clone NameB6Ng01-176H22
Chromosome4 (Build37)
Map Location 74,540,522 - 74,541,292
singlet/doubletsinglet
Overlap genenone
Upstream geneOTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c, LOC100040258, LOC100039814
Downstream geneLOC636847, 3110001D03Rik, LOC623529, LOC100039833, LOC100039884
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-176H22.bB6Ng01-176H22.g
ACCGA004015GA004016
length618784
definitionB6Ng01-176H22.b B6Ng01-176H22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccatgatctgtactcactgataagtggatattagcccagaaatt
tagaatacccaagatataagatacaatttgctaaacgcatgaaactcaag
aagaacgaagaccaaagtgtggacactttgccccttcttagaactgggaa
caaaacacccatggaaggacttacagagacaaagtttggagctgagacga
aaggatggaccatctagagactgccatatctggggatccatcccataatc
agcttccaaacgctgacaccattgcatacattagcaagattttgctgaaa
ggacccagatatggctgtctcttgtgagactatgcaggggcctggcaaac
acagaagtatatgctcacagtcagctattggatggatcacagggcccgca
atggaggagctagagaaagtacccaaggagctgaagggatctgcaatact
ataggtggaacaacaatatgaactaaccagtacccctggagctcatgtct
ctagctgcatatgaatcagaagatggcctagtcggccatcagtggaaaga
gaggcccattggtcgtgcaaactttatatgcctcagtacaggggaacgcc
agggccaagaagtgggag

gaattcccaaattttaatcacttcatagtaaactcttcttcactgaagat
tatcttcagaagtttaataagtgatatatttcgaatatttctcacataat
tgatctcatttcattctacaagatcagtattctgtatatacatttattct
atttctttcccagaattcctgttccatacaaaatacatacatttttctac
acacatacacacaaaacacacacatacacaaaacatacatgtatgtatat
atacgcatatatatttaaatatgtgtgtatatatggattgattgcctatt
aaatatgatattgatatgattatttcctgaagaaaaatagcccagagaca
tagatttctccagaccattactgaccatagctatttttaaatttttgatc
ttcttcattctttctgtttgtttgtttgtttgtttgtttgtttgtttgtt
tcgagacagggtttctctgtgtagtcctggctgtcctggaactcactctg
tagaccaggctggcctcaaactcagaaatctgcctgcctctgcttcccaa
gttactgggattaacggcgtgcgcccaccacacctggctaattttgatct
ttcatgggactgtcaagaccatgtttatgtcagacacttttgtggaacat
attttttgctttaccacagtttcaaactgtattaagtatcaaaaacggtt
tactagtaagcaatactcccagatatttctgcttttccgttgtgattcta
gctgaaggtaaaacacatgttcctccaattccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_74540522_74541292
seq2: B6Ng01-176H22.g_67_850 (reverse)

seq1  TTGGAATT-GAAGAACATGTG-TTTACC-TCAGCTAGAATCACAACGGAA  47
      | |||||| || ||||||||| |||||| |||||||||||||||||||||
seq2  TGGGAATTGGAGGAACATGTGTTTTACCTTCAGCTAGAATCACAACGGAA  50

seq1  AAGCAG-AATATCT-GGAGTATTGCTT-CTAGTAAACCG-TTTTGATACT  93
      |||||| ||||||| |||||||||||| ||||||||||| ||||||||||
seq2  AAGCAGAAATATCTGGGAGTATTGCTTACTAGTAAACCGTTTTTGATACT  100

seq1  TAATACAGTTTGAAACTGTGGTAAAGC-AAAAATATGTTCCAC-AAAGTG  141
      ||||||||||||||||||||||||||| ||||||||||||||| ||||||
seq2  TAATACAGTTTGAAACTGTGGTAAAGCAAAAAATATGTTCCACAAAAGTG  150

seq1  TCTGACAT-AACATGGTCTTGACAGTCCCATG-AAGATCAAAATTAGCCA  189
      |||||||| ||||||||||||||||||||||| |||||||||||||||||
seq2  TCTGACATAAACATGGTCTTGACAGTCCCATGAAAGATCAAAATTAGCCA  200

seq1  GGTGTGGT-GGCGCACGCCGTTAATCCCAGT-ACTTGGGAAGCAGAGGCA  237
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  GGTGTGGTGGGCGCACGCCGTTAATCCCAGTAACTTGGGAAGCAGAGGCA  250

seq1  GGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGG  300

seq1  ACAGCCAGGACTACACAGAGAAACCCTGTCTCGAAACAAACAAACAAACA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCAGGACTACACAGAGAAACCCTGTCTCGAAACAAACAAACAAACA  350

seq1  AACAAACAAACAAACAAACAGAAAGAATGAAGAAGATCAAAAATTTAAAA  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACAAACAAACAAACAGAAAGAATGAAGAAGATCAAAAATTTAAAA  400

seq1  ATAGCTATGGTCAGTAATGGTCTGGAGAAATCTATGTCTCTGGGCTATTT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTATGGTCAGTAATGGTCTGGAGAAATCTATGTCTCTGGGCTATTT  450

seq1  TTCTTCAGGAAATAATCATATCAATATCATATTTAATAGGCAATCAATCC  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGGAAATAATCATATCAATATCATATTTAATAGGCAATCAATCC  500

seq1  ATATATACACACATATTTAAATATATATGCGTATATATACATACATGTAT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATACACACATATTTAAATATATATGCGTATATATACATACATGTAT  550

seq1  GTTTTGTGTATGTGTGTGTTTTGTGTGTATGTGTGTAGAAAAATGTATGT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTGTATGTGTGTGTTTTGTGTGTATGTGTGTAGAAAAATGTATGT  600

seq1  ATTTTGTATGGAACAGGAATTCTGGGAAAGAAATAGAATAAATGTATATA  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTATGGAACAGGAATTCTGGGAAAGAAATAGAATAAATGTATATA  650

seq1  CAGAATACTGATCTTGTAGAATGAAATGAGATCAATTATGTGAGAAATAT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATACTGATCTTGTAGAATGAAATGAGATCAATTATGTGAGAAATAT  700

seq1  TCGAAATATATCACTTATTAAACTTCTGAAGATAATCTTCAGTGAAGAAG  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAAATATATCACTTATTAAACTTCTGAAGATAATCTTCAGTGAAGAAG  750

seq1  AGTTTACTATGAAGTGATTAAAATTTGGGAATTC  771
      ||||||||||||||||||||||||||||||||||
seq2  AGTTTACTATGAAGTGATTAAAATTTGGGAATTC  784


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