BAC Information

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BAC

Clone NameB6Ng01-177K18
Chromosome4 (Build37)
Map Location 95,501,604 - 95,620,759
singlet/doubletdoublet
Overlap genenone
Upstream geneTek, 4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411, 2310009E04Rik
Downstream geneHook1, Cyp2j13, LOC242546, LOC546837, Cyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-177K18.bB6Ng01-177K18.g
ACCGA004876GA004877
length749688
definitionB6Ng01-177K18.b B6Ng01-177K18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,501,604 - 95,502,351)(95,620,131 - 95,620,759)
sequence
gaattcttaattcttatgcctcagtttatcttcctggtgctaggctttaa
cgaggtgtgatgtgatcaggtttggaaataataattatactagctgcact
gcatataacaggtagaaatgggatctctcaatgagcaggtaagacaagat
taaggaagggaagatcatacaatacgaaatcagatagagtttaaaaggtt
tgagaaactaaatgaaggacaaagcaagaaagaaaattatgtctatgccc
tgcaatagaatgtcctgtctggagagagtaaccaaataaagcttgaaatg
aaggccaaggacttcaagtactatattgaataggaagggagaaagtgggc
agccttgtctagtccctgattttagtaggattgctttgagtttctctcca
tttagtttgatgttagctactgctgtgctgtattttgcttttataatgtt
taggtatgggccttgacttcctgatctttccaagacttttatcatgaagg
ggtcttggattatgtcaaatgctttctcaacatctgatgagatggtcatg
tgttttttgtctttgagtttgtttagatagtggattatgttgaacgattt
ccgcatattaaaccatccctgcatccctgggatgaagcctacttgactca
tgctggatgatcggtagatgagggcttggatacggtctgcgcgaataaca
tagagtatcattgcatcgatatacatcatacaaattcatctgaagttct
gaattccctgctatggatcgggctacctatatgttttactagaaatagca
ccaatgctggatgtgtttctgtggaccctcacacttggacaaatatctct
aatactatagtgcaaagcattaagatgggagtgcctatatctcagactgg
acaagctgccttgtttgtatacaaaaaacacagagactgtggaacctgcc
ttcaaaaaaatcaaatacagaagttgttataattaccctcccctttactt
taatgtgactggttattcctactcaatcaaagactggtctggaaattaat
ccaatattggacaaaaggaaatgaccgtgggcatttggaggactggttct
ggacattttcagagacatatttgaaaattggcagctgccttgtatgatgt
tgtgtttgctatggataaaaatggaacatgttctggggttatagtaaata
taacatcctgcattaccccacctaatcttttactaattgggaatgttacc
tttgttatgataaggagttcaatgtacttgttttaattggcttttgtcca
attgtgtttctgcactgtgtaatggtcaatctgtcatggaagtacaacaa
ccagcttttattatgattccagtaaatttgtctgaacccagatattctga
aaaaggcttcaaaatattgagaagcattgcatcacatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95501604_95502351
seq2: B6Ng01-177K18.b_42_790

seq1  GAATTCTTAATTCTTATGCCTCAGTTTATCTTCCTGGTGCTAGGCTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAATTCTTATGCCTCAGTTTATCTTCCTGGTGCTAGGCTTTAA  50

seq1  CAGGGTGTGATGTGATCAGGTTTGGAAAGAATAATTATACTAGCTGCACT  100
      |  ||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CGAGGTGTGATGTGATCAGGTTTGGAAATAATAATTATACTAGCTGCACT  100

seq1  GCAGAGAACAGTTAGAAATGGGATCTCTCAATGAGCAGGTAAGACAAGAT  150
      ||| | ||||| ||||||||||||||||||||||||||||||||||||||
seq2  GCATATAACAGGTAGAAATGGGATCTCTCAATGAGCAGGTAAGACAAGAT  150

seq1  TAAGGAAGGGAAGATCATAGAAGACGAAATCAGATAGAGTTTAAAAGGTT  200
      ||||||||||||||||||| || |||||||||||||||||||||||||||
seq2  TAAGGAAGGGAAGATCATACAATACGAAATCAGATAGAGTTTAAAAGGTT  200

seq1  TGAGAAACTAAATGAAGGACAAAGCAAGAAAGAAAATTATGTCTATGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAACTAAATGAAGGACAAAGCAAGAAAGAAAATTATGTCTATGCCC  250

seq1  TGCAATAGAATGTCCTGTCTGGAGAGAGTAACCAAATAAAGCTTGAAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAGAATGTCCTGTCTGGAGAGAGTAACCAAATAAAGCTTGAAATG  300

seq1  AAGGCCAAGGACTTCAAGTACTATATTGAATAGGTAGGGAGAAAGTGGGC  350
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AAGGCCAAGGACTTCAAGTACTATATTGAATAGGAAGGGAGAAAGTGGGC  350

seq1  AGCCTTGTCTAGTCCCTGATTTTAGTAGGATTGCTTTGAGTTTCTCTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTCTAGTCCCTGATTTTAGTAGGATTGCTTTGAGTTTCTCTCCA  400

seq1  TTTAGTTTGATGTTAGCTACTGCTGTGCTGTATTTTGCTTTTATAATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTTGATGTTAGCTACTGCTGTGCTGTATTTTGCTTTTATAATGTT  450

seq1  TAGGTATGGGCCTTGACTTCCTGATCTTTCCAAGACTTTTATCATGAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATGGGCCTTGACTTCCTGATCTTTCCAAGACTTTTATCATGAAGG  500

seq1  GGTCTTGGATTATGTCAAATGCTTTCTCAGCATCTGATGAGATGGTCATG  550
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGTCTTGGATTATGTCAAATGCTTTCTCAACATCTGATGAGATGGTCATG  550

seq1  TGTTTTTTGTCTTTGAGTTTGTTTAGATAGTGGATTATGTTGAAGGATTT  600
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTTTTTTGTCTTTGAGTTTGTTTAGATAGTGGATTATGTTGAACGATTT  600

seq1  CCGTATATTAAACCATCCCTGCATCCCTGGGATGAAGCCTACTTG-GTCA  649
      ||| |||||||||||||||||||||||||||||||||||||||||  |||
seq2  CCGCATATTAAACCATCCCTGCATCCCTGGGATGAAGCCTACTTGACTCA  650

seq1  TGCTGGATGATCGTTTGATGTGTTCTTGGATTTGGTTTGCAAGAATTTTA  699
      ||||||||||||| | |||| |  |||||||  ||| |||  ||||   |
seq2  TGCTGGATGATCGGTAGATGAGGGCTTGGATACGGTCTGCGCGAATAACA  700

seq1  TTGAGTATTTTTGCATCAATATTCATAAGAGAAATTCATCTGAAGTTCT  748
      | ||||||  ||||||| |||| ||| | | ||||||||||||||||||
seq2  TAGAGTATCATTGCATCGATATACATCATACAAATTCATCTGAAGTTCT  749

seq1: chr4_95620131_95620759
seq2: B6Ng01-177K18.g_64_691 (reverse)

seq1  AATTTACTGGAATCATAATAAAAGCTGGTTGTTGTACTTCCATTACAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AATTTACTGGAATCATAATAAAAGCTGGTTGTTGTACTTCCATGACAGAT  50

seq1  TGACCATTACACAGTGCAGAAACACAATTGGACAAAAGCCAATTAAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCATTACACAGTGCAGAAACACAATTGGACAAAAGCCAATTAAAACA  100

seq1  AGAACATTGAACTCCTTATCATAACAAAGGTAACATTCCCAATTAGTAAA  150
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACATTGAACTCCTTATCATAACAAAGGTAACATTCCCAATTAGTAAA  150

seq1  AGATTAGGTGGGGTAATGCAGGATGTTATATTTACTATAACCCCAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTAGGTGGGGTAATGCAGGATGTTATATTTACTATAACCCCAGAACA  200

seq1  TGTTCCATTTTTATCCATAGCAAACACAACATCATACAAGGCAGCTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCATTTTTATCCATAGCAAACACAACATCATACAAGGCAGCTGCCA  250

seq1  ATTTTCAAATATGTCTCTGAAAATGTCCAGAACCAGTCCTCCAAATGCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAATATGTCTCTGAAAATGTCCAGAACCAGTCCTCCAAATGCCC  300

seq1  ACGGTCATTTCCTTTTGTCCAATATTGGATTAATTTCCAGACCAGTCTCT  350
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACGGTCATTTCCTTTTGTCCAATATTGGATTAATTTCCAGACCAGTCTTT  350

seq1  GATTGAGTAGGAATAACCAGTCACATTAAAGTAAAGGGGAGGGTAATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAGTAGGAATAACCAGTCACATTAAAGTAAAGGGGAGGGTAATTAT  400

seq1  AACAACTTCTGTATTTGATTTTTTTGAAGGCAGGTTCCACAGTCTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACTTCTGTATTTGATTTTTTTGAAGGCAGGTTCCACAGTCTCTGTG  450

seq1  TTCTCTGTCTACAAACAAGGCAGCTTGTCCAGTCTGAGATATAGGCACTC  500
      || | ||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTATACAAACAAGGCAGCTTGTCCAGTCTGAGATATAGGCACTC  500

seq1  CCATCTTAATGCTTTGCACTATAGTCTTAGAGATATTTGTCCAAGTCTGA  550
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  CCATCTTAATGCTTTGCACTATAGTATTAGAGATATTTGTCCAAGTGTGA  550

seq1  GGGTCCACAGAAACACATCCAGCATTGGTGCTATTTCTAGTAAAACATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCACAGAAACACATCCAGCATTGGTGCTATTTCTAGTAAAACATAT  600

seq1  AGGTAGCCTGATCCATAGCAGTGGAATTC  629
      |||||||| |||||||||||| |||||||
seq2  AGGTAGCCCGATCCATAGCAG-GGAATTC  628