BAC Information

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BAC

Clone NameB6Ng01-178G14
Chromosome4 (Build37)
Map Location 81,574,691 - 81,575,848
singlet/doubletsinglet
Overlap genenone
Upstream geneD4Bwg0951e, Mpdz, LOC100040131, LOC100040144, EG668895
Downstream geneLOC100040164, EG545641, Nfib, Zdhhc21, Cer1, Frem1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178G14.g
ACCGA005408
length1,159
definitionB6Ng01-178G14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaggaaattgagaccgatctttgtgagacttcacttacaaata
caaatatatccagactgtgtgaggatgtatgcctttaaaaaattaagtct
aggtataatagattgtatttgaaaaaaattgaaaaagaattatgattata
tacataaatgcaagcattattatttatctataaataataatgtaaatcaa
taatgttgcattcaggaagtagtactgagaagtccttggaaaagagatga
gattccatattctatcattctgattgagttttaacgtgaactctattttt
taatttaaattaatttaatttaatttaattaaatctatacatgaaatcta
tacatgaaatatattatataaaatattatataaaaatttcatgtatagaa
atctatacatgagtaatatatttacatcatttccatccttctcgcttccc
cctctcacccctcctgtgtctaattaaaattcatgtattatgaagtttaa
aagattagtttatcttagtatattatgtggcagtagtaatgccaatctct
tctccatcgattatttatttatttactcctttgttcatttgttcattcat
ttggactgcggtatcatagtttggccttgctatatatgtctttgaacttt
cttatcccattacacgggtaccaagtccatctagctctatttgtccttca
ctggatgtcaatcttctagaagtaaaatttactacaagtttggtccagga
aacactctgacacttaggctttgcttggggtgttatttgaaaaggaaact
tgccatcatcaaatccagtttcaggagcccacacagaatgtgtggcatgg
ctccaacagttctttttctggttcctttgagatttgtttattactttgaa
aatcggaatttcacaaaacaacgtaacacttgcctgcttcgccgtagctc
agtagagtagctgagcaaaggaaacttaacttaatttgaacgtttggctt
tgccatatgtattagcaatgataaagcatcggcacagagccaaaacaacc
gttgactgactgagttccacagccaggaaaactcactcttttgtacttct
tattgcagaaggaaagactctcaaagagcattgtcggctttcctgaatga
ctcgacctt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_81574691_81575848
seq2: B6Ng01-178G14.g_63_1221 (reverse)

seq1  AAGGTCTGAGTCATCTCAGGAAAGCCCGACAATGCTCTTT-TGAGTCTTT  49
      |||||| ||||||| ||||||||| |||||||||||||||  ||||||||
seq2  AAGGTC-GAGTCAT-TCAGGAAAG-CCGACAATGCTCTTTGAGAGTCTTT  47

seq1  CCTTCTTGCATAAGAAGTACAAAGAAGTTGAGTTTCCTGGGCTGTGG-AC  98
      ||||||   ||||||||||||||  || ||||||| |  |||||||| ||
seq2  CCTTCTGCAATAAGAAGTACAAAAGAG-TGAGTTTTCCTGGCTGTGGAAC  96

seq1  TCAGTCAGTC-ACGGTTGTTTT-GCTCTGTGCCGTTGCTTTTATCATTGC  146
      |||||||||| ||||||||||| ||||||||||| ||| |||||||||||
seq2  TCAGTCAGTCAACGGTTGTTTTGGCTCTGTGCCGATGC-TTTATCATTGC  145

seq1  TAATACATATGGCAAAGCC-AACGTTCAAATTAAGTTAAGTCT-CTTTGC  194
      ||||||||||||||||||| ||||||||||||||||||||| | ||||||
seq2  TAATACATATGGCAAAGCCAAACGTTCAAATTAAGTTAAGTTTCCTTTGC  195

seq1  TCAGCTACTCTACTGAGCTACGGCGAAGCAGGCAAGTGTTACGTTGTTTT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTACTCTACTGAGCTACGGCGAAGCAGGCAAGTGTTACGTTGTTTT  245

seq1  GTGGAAATTCCGATTTTCAAAGTAATAAACAAATCTCAAAGGAACCAG-A  293
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GT-GAAATTCCGATTTTCAAAGTAATAAACAAATCTCAAAGGAACCAGAA  294

seq1  AAAGAACTGTTGGAGCCATGCCACACATTCTGTGTGGGCTCCTGAAACTG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTGTTGGAGCCATGCCACACATTCTGTGTGGGCTCCTGAAACTG  344

seq1  GATTTGATGATGGCAAGTTTCCTTTTCAAATAACACCCCAAGCAAAGCCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGATGATGGCAAGTTTCCTTTTCAAATAACACCCCAAGCAAAGCCT  394

seq1  AAGTGTCAGAGTGTTTCCTGGACCAAACTTGTAGTAAATTTTACTTCTAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCAGAGTGTTTCCTGGACCAAACTTGTAGTAAATTTTACTTCTAG  444

seq1  AAGATTGACATCCAGTGAAGGACAAATAGAGCTAGATGGACTTGGTACCC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGACATCCAGTGAAGGACAAATAGAGCTAGATGGACTTGGTACCC  494

seq1  GTGTAATGGGATAAGAAAGTTCAAAGACATATATAGCAAGGCCAAACTAT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATGGGATAAGAAAGTTCAAAGACATATATAGCAAGGCCAAACTAT  544

seq1  GATACCGCAGTCCAAATGAATGAACAAATGAACAAAGGAGTAAATAAATA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCGCAGTCCAAATGAATGAACAAATGAACAAAGGAGTAAATAAATA  594

seq1  AATAATCGATGGAGAAGAGATTGGCATTACTACTGCCACATAATATACTA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCGATGGAGAAGAGATTGGCATTACTACTGCCACATAATATACTA  644

seq1  AGATAAACTAATCTTTTAAACTTCATAATACATGAATTTTAATTAGACAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAACTAATCTTTTAAACTTCATAATACATGAATTTTAATTAGACAC  694

seq1  AGGAGGGGTGAGAGGGGGAAGCGAGAAGGATGGAAATGATGTAAATATAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGGTGAGAGGGGGAAGCGAGAAGGATGGAAATGATGTAAATATAT  744

seq1  TACTCATGTATAGATTTCTATACATGAAATTTTTATATAATATTTTATAT  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCATGTATAGATTTCTATACATGAAATTTTTATATAATATTTTATAT  794

seq1  AATATATTTCATGTATAGATTTCATGTATAGATTTAATTAAATTAAATTA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTTCATGTATAGATTTCATGTATAGATTTAATTAAATTAAATTA  844

seq1  AATTAATTTAAATTAAAAAATAGAGTTCACGTTAAAACTCAATCAGAATG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTTAAATTAAAAAATAGAGTTCACGTTAAAACTCAATCAGAATG  894

seq1  ATAGAATATGGAATCTCATCTCTTTTCCAAGGACTTCTCAGTACTACTTC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAATATGGAATCTCATCTCTTTTCCAAGGACTTCTCAGTACTACTTC  944

seq1  CTGAATGCAACATTATTGATTTACATTATTATTTATAGATAAATAATAAT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATGCAACATTATTGATTTACATTATTATTTATAGATAAATAATAAT  994

seq1  GCTTGCATTTATGTATATAATCATAATTCTTTTTCAATTTTTTTCAAATA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCATTTATGTATATAATCATAATTCTTTTTCAATTTTTTTCAAATA  1044

seq1  CAATCTATTATACCTAGACTTAATTTTTTAAAGGCATCTATCTTCATACA  1093
      |||||||||||||||||||||||||||||||||||||  ||| ||| |||
seq2  CAATCTATTATACCTAGACTTAATTTTTTAAAGGCATACATCCTCACACA  1094

seq1  GTCTGGATATATTTTTCTTCTTAATTGAAGTCTCACAAATATCTGTCTCC  1143
      |||||||||||||| | ||  ||| |||||||||||||| ||| ||||| 
seq2  GTCTGGATATATTTGTATTTGTAAGTGAAGTCTCACAAAGATCGGTCTCA  1144

seq1  TTTTCCTTTGAATTC  1158
       ||||||||||||||
seq2  ATTTCCTTTGAATTC  1159