BAC Information

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BAC

Clone NameB6Ng01-180N19
Chromosome4 (Build37)
Map Location 149,592,291 - 149,646,881
singlet/doubletdoublet
Overlap geneLOC100041882, Eno1
Upstream geneKif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1, Lzic, Ctnnbip1, Clstn1, Pik3cd, D4Ertd429e, Slc25a33, Spsb1, H6pd, Gpr157, Slc2a5, LOC435818, Car6
Downstream geneLOC666880, LOC384091, Rere, Slc45a1, LOC677027, Errfi1, Park7, Tnfrsf9, Uts2, Per3, Vamp3, Camta1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-180N19.bB6Ng01-180N19.g
ACCGA007183GA007184
length642453
definitionB6Ng01-180N19.b B6Ng01-180N19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,646,240 - 149,646,881)(149,592,291 - 149,592,749)
sequence
gaattccaccctcggggaagctgcatttaaagataaatattttcccccta
tcctgtagattgcttgggttgaaggtgttgttttctagggataacagggg
catgataattggtgctcataactgcacaaactgtactttctctaaaagcc
aaacaaacaagacaaaggggcctttaggggcctttacgggccttccctcc
ttaacaggattttctaaaatcatgtttaaggaacccagaagttaactgaa
tacctgacagggcagaacaactctctgatgtgggaagaacaccaaaactc
agctttgccagacaagagctgtaatgtccaggatggtcaaatctaggcca
gtctcctccattctgctcagtcccaaggatgattgtgtcacatcagcggt
gtgcatgaggtactggagagtgaactcagagccccaaaccttctaggcaa
atgctccgaccccgagcccgcagccagacagtcccttacattttttttta
attgtatttatttgatgtgtgtaggtgtttggcttttatgcgtgtctctg
ccactgtgtgcctggtgccggaggagggcaaagaagacatggaatcctat
agggctttatttttttgagacaaggtcacacatgtagccctg
aggacctctagaagatcactcagtgctcttaacctcttaatctctctaca
gccctaattttattttattttttttaagacaggatttcatgtgtccctgg
ctggtcttgaactcacagagatgcacctgactctgtttacccagttctag
gattaaaggcttggaccactaagcccagccaacaactttcatttttgaaa
tgaaatgtaggcacgtgttggcgtacacctatggtaccagtgacccagga
ggtatgatcgagcccaacctgggtaacccagggaaattctcttctcaata
aaaagcaagtcagatgtggtgcatactggaggcagagccagaggatcaga
ggattttgagttcaaggccagcctggtctacgtaacagagctctgggttg
ggtttgttttcatttggggttggagattttgtctttttgggtttttgggg
ggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_149646240_149646881
seq2: B6Ng01-180N19.b_49_690 (reverse)

seq1  CAGGGCTACATGTGTGACCTTGTCTCAAAAAAATAAAGCCCTATAGGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTACATGTGTGACCTTGTCTCAAAAAAATAAAGCCCTATAGGATT  50

seq1  CCATGTCTTCTTTGCCCTCCTCCGGCACCAGGCACACAGTGGCAGAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCTTCTTTGCCCTCCTCCGGCACCAGGCACACAGTGGCAGAGACA  100

seq1  CGCATAAAAGCCAAACACCTACACACATCAAATAAATACAATTAAAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATAAAAGCCAAACACCTACACACATCAAATAAATACAATTAAAAAAA  150

seq1  AATGTAAGGGACTGTCTGGCTGCGGGCTCGGGGTCGGAGCATTTGCCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAGGGACTGTCTGGCTGCGGGCTCGGGGTCGGAGCATTTGCCTAG  200

seq1  AAGGTTTGGGGCTCTGAGTTCACTCTCCAGTACCTCATGCACACCGCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTGGGGCTCTGAGTTCACTCTCCAGTACCTCATGCACACCGCTGA  250

seq1  TGTGACACAATCATCCTTGGGACTGAGCAGAATGGAGGAGACTGGCCTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACACAATCATCCTTGGGACTGAGCAGAATGGAGGAGACTGGCCTAG  300

seq1  ATTTGACCATCCTGGACATTACAGCTCTTGTCTGGCAAAGCTGAGTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACCATCCTGGACATTACAGCTCTTGTCTGGCAAAGCTGAGTTTTG  350

seq1  GTGTTCTTCCCACATCAGAGAGTTGTTCTGCCCTGTCAGGTATTCAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTTCCCACATCAGAGAGTTGTTCTGCCCTGTCAGGTATTCAGTTA  400

seq1  ACTTCTGGGTTCCTTAAACATGATTTTAGAAAATCCTGTTAAGGAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGGGTTCCTTAAACATGATTTTAGAAAATCCTGTTAAGGAGGGAA  450

seq1  GGCCCGTAAAGGCCCCTAAAGGCCCCTTTGTCTTGTTTGTTTGGCTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCGTAAAGGCCCCTAAAGGCCCCTTTGTCTTGTTTGTTTGGCTTTTA  500

seq1  GAGAAAGTACAGTTTGTGCAGTTATGAGCACCAATTATCATGCCCCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTACAGTTTGTGCAGTTATGAGCACCAATTATCATGCCCCTGTT  550

seq1  ATCCCTAGAAAACAACACCTTCAACCCAAGCAATCTACAGGATAGGGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTAGAAAACAACACCTTCAACCCAAGCAATCTACAGGATAGGGGGA  600

seq1  AAATATTTATCTTTAAATGCAGCTTCCCCGAGGGTGGAATTC  642
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTATCTTTAAATGCAGCTTCCCCGAGGGTGGAATTC  642

seq1: chr4_149592291_149592749
seq2: B6Ng01-180N19.g_66_524

seq1  GAATTCAGGACCTCTAGAAGATCACTCAGTGCTCTTAACCTCTTAATCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGACCTCTAGAAGATCACTCAGTGCTCTTAACCTCTTAATCTC  50

seq1  TCTACAGCCCTAATTTTATTTTATTTTTTTTAAGACAGGATTTCATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACAGCCCTAATTTTATTTTATTTTTTTTAAGACAGGATTTCATGTGT  100

seq1  CCCTGGCTGGTCTTGAACTCACAGAGATGCACCTGACTCTGTTTACCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTGGTCTTGAACTCACAGAGATGCACCTGACTCTGTTTACCCAG  150

seq1  TTCTAGGATTAAAGGCTTGGACCACTAAGCCCAGCCAACAACTTTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGGATTAAAGGCTTGGACCACTAAGCCCAGCCAACAACTTTCATTT  200

seq1  TTGAAATGAAATGTAGGCACGTGTTGGCGTACACCTATGGTACCAGTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGAAATGTAGGCACGTGTTGGCGTACACCTATGGTACCAGTGAC  250

seq1  CCAGGAGGTATGATCGAGCCCAACCTGGGTAACCCAGGGAAATTCTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGGTATGATCGAGCCCAACCTGGGTAACCCAGGGAAATTCTCTTC  300

seq1  TCAATAAAAAGCAAGTCAGATGTGGTGCATACTGGAGGCAGAGCCAGAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAAAAGCAAGTCAGATGTGGTGCATACTGGAGGCAGAGCCAGAGG  350

seq1  ATCAGAGGATTTTGAGTTCAAGGCCAGCCTGGTCTACGTAACAGAGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGGATTTTGAGTTCAAGGCCAGCCTGGTCTACGTAACAGAGCTCT  400

seq1  GGGTTGGGTTTGTTTTCATTTGGGGTTGGAGATTTTGTCTTTTTGGGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGGGTTTGTTTTCATTTGGGGTTGGAGATTTTGTCTTTTTGGGTTT  450

seq1  TTGGGGGGG  459
      |||||||||
seq2  TTGGGGGGG  459