BAC Information

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BAC

Clone NameB6Ng01-183O17
Chromosome4 (Build37)
Map Location 49,220,098 - 49,221,081
singlet/doubletsinglet
Overlap geneE130309F12Rik
Upstream geneTxndc4, Invs, Tex10, 5730528L13Rik, Tmeff1, 2310039E09Rik
Downstream geneLOC666602, Rbpsuh-ps1, C730036D15Rik, LOC100040919, LOC666617, Rbpsuh-ps2, LOC230161, Baat, Mrpl50, Zfp189, Aldob, 2810432L12Rik, LOC100040742, Rnf20, Ppp3r2, LOC666663
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-183O17.bB6Ng01-183O17.g
ACCGA009425GA009426
length879998
definitionB6Ng01-183O17.b B6Ng01-183O17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgttgggctggattggtagatacatactgtttgaatttggtt
ttgtcttggaatattttggtttttccatctatgctgattgagagttttgt
aggtatagtagcctgggctgacatttttgttgtcttagagtctgtatgac
ctctgtccaggttcttttggcttttagtgtctctgttgagaagtctggtg
taatactgataggtctgcgttgatatgttacttggaccctttcccttgca
gcttataatactttctttgttctgtgcatttggtgtttggattattatgt
gatgggaggaatgtcttttctggtctagtctatttggagttctgtaggtt
tcttgttcttttatggccatctctttctttaggttggagaagttttcttc
tatgattttgttgaaaatattttcaggtcctttgagctgcgaatcttctc
tcttttattcctattattcttatatttaagcttttcattttgtcctgaat
gcaactgtgtcaatctcctctaaggtatcttcctcacctgagattctctc
ttatatcccttttagtttgttggtgatgcttacaacggtagtttctgacc
tctttcctaagttttacatttcctgggttgcttctatttgtgttttcttt
attgtttctacttccacatttaggtcttggaccactttattcaatttgtt
gatctattttgattgtgttttcctgtattttcttaggggatttatttgtt
tcctctataagagcttctttcttgtattttccctgtatttttttcagtga
gttatgtttatactccttaaagaaatttattatcttcatgagataggact
tttaggtaacttactgatttttaggtgtg
gaattcagtctggatagctgtggaaataatcacgccatcccaaaggtagc
tagagcgtcttttacgttgtatatgtttttggttggctggggattatgta
tgttgatctatttattatctgtgaaaagagtcactcaggctaaactacta
catagcataacaaatacagactttcagtaactgtgccggctttttccttt
agtgttgttgttgttttagacacagaatcgccctttttagtccggactgt
cttgacctcacacaatccttctgctttagccttatgagtactgggattat
gggctagtatgacctcacctacctagaaacatttttatactcagccgatg
aatcatagtgacttttgagcttaaagttttatgtttaaaagtttaaagtc
tgtgtgttttatctggtgggcatttaggggcaggatagtattgcctggca
gtttattctctgtttgacatttgtgaagcagcttgcttgccttacagaat
ctggtggactaggagagaaggtcaaagcttatatataaataattaagcta
aaattctagaagtttaaacaactcatctctgcaacatgcacatattgcct
ttaacttgctacataatgtaatggacaacactagtcacattctagcaacg
cagtgtgtgaattatgggttctacctcttgttgaaattgtaatggatgaa
aggagtactttttcttggtgcctatgcagaaaatgtaaagaatacccatt
tcccttttttaagtgttctctttttttgttataaaaaaaaataaaatgta
tagtattctatgaggatgctgaggaataagtcacctatcattcatcttca
ttcttctagcacacttttaatattttagatttaaccccccccaagcccaa
caagaaccaagtccttaagcaaaggataatttattatttgaaaactggta
cttttctgaaggttttttagctcctaatttgagaatgatgaaccttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_49220098_49221081
seq2: B6Ng01-183O17.g_66_1063

seq1  GAATTCAGTCTGGATAGCTGTGGAAATAATCACGCCATCCCAAAGGTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTGGATAGCTGTGGAAATAATCACGCCATCCCAAAGGTAGC  50

seq1  TAGAGCGTCTTTTACGTTGTATATGTTTTTGGTTGGCTGGGGATTATGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCGTCTTTTACGTTGTATATGTTTTTGGTTGGCTGGGGATTATGTA  100

seq1  TGTTGATCTATTTATTATCTGTGAAAAGAGTCACTCAGGCTAAACTACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGATCTATTTATTATCTGTGAAAAGAGTCACTCAGGCTAAACTACTA  150

seq1  CATAGCATAACAAATACAGACTTTCAGTAACTGTGCCGGCTTTTTCCTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCATAACAAATACAGACTTTCAGTAACTGTGCCGGCTTTTTCCTTT  200

seq1  AGTGTTGTTGTTGTTTTAGACACAGAATCGCCCTTTTTAGTCCGGACTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGTTGTTGTTTTAGACACAGAATCGCCCTTTTTAGTCCGGACTGT  250

seq1  CTTGACCTCACACAATCCTTCTGCTTTAGCCTTATGAGTACTGGGATTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACCTCACACAATCCTTCTGCTTTAGCCTTATGAGTACTGGGATTAT  300

seq1  GGGCTAGTATGACCTCACCTACCTAGAAACATTTTTATACTCAGCCGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTAGTATGACCTCACCTACCTAGAAACATTTTTATACTCAGCCGATG  350

seq1  AATCATAGTGACTTTTGAGCTTAAAGTTTTATGTTTAAAAGTTTAAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAGTGACTTTTGAGCTTAAAGTTTTATGTTTAAAAGTTTAAAGTC  400

seq1  TGTGTGTTTTATCTGGTGGGCATTTAGGGGCAGGATAGTATTGCCTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTTATCTGGTGGGCATTTAGGGGCAGGATAGTATTGCCTGGCA  450

seq1  GTTTATTCTCTGTTTGACATTTGTGAAGCAGCTTGCTTGCCTTACAGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCTCTGTTTGACATTTGTGAAGCAGCTTGCTTGCCTTACAGAAT  500

seq1  CTGGTGGACTAGGAGAGAAGGTCAAAGCTTATATATAAATAATTAAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGACTAGGAGAGAAGGTCAAAGCTTATATATAAATAATTAAGCTA  550

seq1  AAATTCTAGAAGTTTAAACAACTCATCTCTGCAACATGCACATATTGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTAGAAGTTTAAACAACTCATCTCTGCAACATGCACATATTGCCT  600

seq1  TTAACTTGCTACATAATGTAATGGACAACACTAGTCACATTCTAGCAACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTGCTACATAATGTAATGGACAACACTAGTCACATTCTAGCAACG  650

seq1  CAGTGTGTGAATTATGGGTTCTACCTCTTGTTGAAATTGTAATGGATGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTGAATTATGGGTTCTACCTCTTGTTGAAATTGTAATGGATGAA  700

seq1  AGGAGTACTTTTTCTTGGTGCCTATGCAGAAAATGT-AAGAATA-CCATT  748
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  AGGAGTACTTTTTCTTGGTGCCTATGCAGAAAATGTAAAGAATACCCATT  750

seq1  TCC--TTTTTAAGTGTTCTCTTTTTTTGTTAT-AAAAAAAATAAAATGTA  795
      |||  ||||||||||||||||||||||||||| |||||||||||||||||
seq2  TCCCTTTTTTAAGTGTTCTCTTTTTTTGTTATAAAAAAAAATAAAATGTA  800

seq1  TAGTATTCTATGAGGATGCTGAGGAATAAGTCACCTATCA-TCATCTTCA  844
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAGTATTCTATGAGGATGCTGAGGAATAAGTCACCTATCATTCATCTTCA  850

seq1  TTCTTCTAGCACACTTTT-ATATTTTAGATTT-ACCCCCCCCAAGCCCAA  892
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  TTCTTCTAGCACACTTTTAATATTTTAGATTTAACCCCCCCCAAGCCCAA  900

seq1  CAAGAACCAAGTCTTAAAGCAAAGGATAATTTATTA-TTGAAAACT-GTA  940
      ||||||||||||| | |||||||||||||||||||| ||||||||| |||
seq2  CAAGAACCAAGTCCTTAAGCAAAGGATAATTTATTATTTGAAAACTGGTA  950

seq1  C-TTTCTGAAGG-TTTTTAGCT-CTAATTTGAGAATGATG-AGCTTGG  984
      | |||||||||| ||||||||| ||||||||||||||||| | |||||
seq2  CTTTTCTGAAGGTTTTTTAGCTCCTAATTTGAGAATGATGAACCTTGG  998