BAC Information

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BAC

Clone NameB6Ng01-185B05
Chromosome4 (Build37)
Map Location 3,481,180 - 3,482,146
singlet/doubletsinglet
Overlap geneTmem68
Upstream geneLOC100039124, LOC100039141, EG666464, LOC100039044, LOC631371, LOC666513
Downstream geneTgs1, Lyn, LOC621858, Rps20, Mos, Plag1, Chchd7, LOC666586, Rdhe2, 4833413O15Rik, Penk1, A830012C17Rik, LOC100039297, LOC622019
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185B05.bB6Ng01-185B05.g
ACCGA010285GA010286
length1,030737
definitionB6Ng01-185B05.b B6Ng01-185B05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacatctgatccatgagctggaggcagagagagctgactgactca
aagtgtgggccttttgacacttcagagtcctccctcaatatcacacctcc
tccaacaaggccacacctcctaattcttcccaagcagttctgtcaactgg
ggactgagaattcaaatttatgagcttagaggggtcattctcactaacca
ccacaccccttcaaagtgtcttcatcttgtaacttctgaaatgagcatat
tatttaggaactagtaaaactaatttaccatatttgttttatttaatgaa
atcattgagtattaaaatctttgagtttctaggatttatctataaggaaa
attggtaggtgaattatttttgtgctccaactagaggatagccattccaa
tttatatttcataaatgatcaagtcaaatttagtttgataaatcacacta
ccttacatatgcctttagtgttaaaatctatttttaggatttcaaatgtg
ccctcaaaaaagttgccttagtgagtcaatggagaccttaagtggactta
tttatttactttttaatttaaattcttttctttagcccattattcctatg
tttacacaaaatattcgagaaggattttagatcacttggaggcacaagta
agtttctcattcatatggtttttaattatagtgtaatacataaaacattt
gggggtttgaaccccattaggaaaacttttgatttttttttgttttggtt
tttgtttttgagacagggtctcgctgtatggttctgggctatcctagaac
ttactgtatagatcagtctggccctaaattcagagatgcccctgcctcct
gcctctctgcctctctgcctctctgccactgcctctctgcctctctgcct
ctctgccctctctgcctccctgccctctgccctgcctcactgcctctgcc
cctctgccacagcatctctgccacactgcctatcggcctcccagcctcac
tgcctcttattgctctttggcctctctgcc
gaattctcatattggttccctgaactctagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctctgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggaattgcagaaattactgccac
tatcaaggacttgaaagatgcaggggtggtggttcccaccacatctccat
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattaccgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttccttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgattgacattatgctgattggaccaagttgag
caggaagtagcaaccactttggactcattggtaacacatatgcgtatcag
aggatgggaaataaatttcaacctttattttattgaccatctacctcagt
gaaattcttaggagtccagtgggtgtggggcatgcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_3481180_3482146
seq2: B6Ng01-185B05.b_43_1072 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  GGCAGAGAGGCCAAAGAGCAATAAGAGGCAGTGAGGCTGGGAGGCCGATA  50

seq1  --------GGCAGAGAGGCAGAGGCAGAGGGGCAGAGGCAGAGAGGCAGA  42
              |||||||| || | ||||||||||||||||||| ||||||| 
seq2  GGCAGTGTGGCAGAGATGCTGTGGCAGAGGGGCAGAGGCAGTGAGGCAG-  99

seq1  GGCAGAGAGGCAGAGAGGCAGAGA-GGCAGAGAGGCAGAGAGGCAGAGAG  91
      ||||||| ||||| |||||||||| |||||||||||||||||||||||||
seq2  GGCAGAG-GGCAGGGAGGCAGAGAGGGCAGAGAGGCAGAGAGGCAGAGAG  148

seq1  GCAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCA-GAGGCAGAGGCATCTC  140
      |||| |||||||||||||||||||||||||||| ||||||| ||||||||
seq2  GCAGTGGCAGAGAGGCAGAGAGGCAGAGAGGCAGGAGGCAGGGGCATCTC  198

seq1  TGAATTTAGGGCCAGACTGATCTATACAGTAAGTTCTAGGATAG-CCAGA  189
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGAATTTAGGGCCAGACTGATCTATACAGTAAGTTCTAGGATAGCCCAGA  248

seq1  ACCATACAGCGAGACCCTGTCTC-AAAACAAAAACAAAAAC-AAAAAAAA  237
      ||||||||||||||||||||||| ||||||||||| ||||| ||||||||
seq2  ACCATACAGCGAGACCCTGTCTCAAAAACAAAAACCAAAACAAAAAAAAA  298

seq1  TCAAAAGTTTTCCTAATGGGGTTCAAACCCCCAAATGTTTTATGTATTAC  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGTTTTCCTAATGGGGTTCAAACCCCCAAATGTTTTATGTATTAC  348

seq1  ACTATAATTAAAAACCATATGAATGAG-AACTTACTTGTGCCTCCAAGTG  336
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTATAATTAAAAACCATATGAATGAGAAACTTACTTGTGCCTCCAAGTG  398

seq1  ATCT-AAATCCTTCTCGAATATTTTGTGTAAACATAGGAATAATGGGCTA  385
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAATCCTTCTCGAATATTTTGTGTAAACATAGGAATAATGGGCTA  448

seq1  AAGAAAAGAATTTAAATTAAAAAGTAAATAAATAAGTCCACTTAAGGTCT  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGAATTTAAATTAAAAAGTAAATAAATAAGTCCACTTAAGGTCT  498

seq1  CCATTGACTCACTAAGGCAACTTTTTTGAGGGCACATTTGAAATCCTAAA  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGACTCACTAAGGCAACTTTTTTGAGGGCACATTTGAAATCCTAAA  548

seq1  AATAGATTTTAACACTAAAGGCATATGTAAGGTAGTGTGATTTATCAAAC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATTTTAACACTAAAGGCATATGTAAGGTAGTGTGATTTATCAAAC  598

seq1  TAAATTTGACTTGATCATTTATGAAATATAAATTGGAATGGCTATCCTCT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTGACTTGATCATTTATGAAATATAAATTGGAATGGCTATCCTCT  648

seq1  AGTTGGAGCACAAAAATAATTCACCTACCAATTTTCCTTATAGATAAATC  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGAGCACAAAAATAATTCACCTACCAATTTTCCTTATAGATAAATC  698

seq1  CTAGAAACTCAAAGATTTTAATACTCAATGATTTCATTAAATAAAACAAA  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAACTCAAAGATTTTAATACTCAATGATTTCATTAAATAAAACAAA  748

seq1  TATGGTAAATTAGTTTTACTAGTTCCTAAATAATATGCTCATTTCAGAAG  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTAAATTAGTTTTACTAGTTCCTAAATAATATGCTCATTTCAGAAG  798

seq1  TTACAAGATGAAGACACTTTGAAGGGGTGTGGTGGTTAGTGAGAATGACC  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAGATGAAGACACTTTGAAGGGGTGTGGTGGTTAGTGAGAATGACC  848

seq1  CCTCTAAGCTCATAAATTTGAATTCTCAGTCCCCAGTTGACAGAACTGCT  835
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAGCTCATAAATTTGAATTCTCAGTCCCCAGTTGACAGAACTGCT  898

seq1  TGGGAAGAATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGATATTGAGG  885
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGAATTAGGAGGTGTGGCCTTGTTGGAGGAGGTGTGATATTGAGG  948

seq1  GAGGACTCTGAAGTGTCAAAAGGCCCACACTTTGAGTCAGTCAGCTCTCT  935
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTCTGAAGTGTCAAAAGGCCCACACTTTGAGTCAGTCAGCTCTCT  998

seq1  CTGCCTCCAGCTCATGGATCAGATGTGAATTC  967
      ||||||||||||||||||||||||||||||||
seq2  CTGCCTCCAGCTCATGGATCAGATGTGAATTC  1030