BAC Information

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BAC

Clone NameB6Ng01-185B13
Chromosome4 (Build37)
Map Location 119,100,229 - 119,244,731
singlet/doubletdoublet
Overlap geneZmynd12, BC057371, LOC666766, LOC384052, AA415398, Foxj3
Upstream geneElovl1, Cdc20, Mpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329, Olfr1519, Lao1, LOC666703, OTTMUSG00000008833, Slc2a1, Zfp691, Ermap, Ccdc23, 4930538K18Rik, AU022252, Lepre1, Cldn19, Ybx1, Ppih, 1700041C02Rik, Ldha-ps2, LOC100041471, Ppcs
Downstream geneGuca2a, Guca2b, Hivep3, Edn2, Foxo6, Scmh1, Slfnl1, Ctps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185B13.bB6Ng01-185B13.g
ACCGA010301GA010302
length978295
definitionB6Ng01-185B13.b B6Ng01-185B13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,100,229 - 119,101,196)(119,244,437 - 119,244,731)
sequence
gaattcctgttacttactaaataaaaatgacacaacacacacaaaaaaaa
tccagagctggtgaaggcacagttgagccagccccgcgggttgtgggagc
aggagagctggcccagcccctcacaggctgcagcacttgggagactgggg
cctgcactctgactaggcagcccaagcagctggctctggaggtgtgggtg
ctgttgaacccaccctgagggcatgagagcagaagagctgatcctgccac
cttcctgtggcagctttgggtggcatagctggagcagtgccagagagctt
gccctggtggtttggataagggagagccagctcagctattagccaggccc
agatcctgggctctgaattggctcacctcaaaatctatatcatctgcaaa
tggttggaactcatgaaagggccagtcctgctgtcccaaagctgcaggat
atccatgacaccgggcaataaaaggataaccaggaggagtctggatgaga
atccagtattgatggtgtcatagaagccttcgatctcagaacccagagca
atgactcattgcaatgaacatttgcaagtgaagatgtgtggacagaggga
tatagtgtgggacacgctgtgacatgctacagcttccgcgagatgttttc
tatgtttttgttgtttgtgtatacgttttattttgtgggaatgctgcaag
ggcagagagtggatatgaggggacagggagatgagtggctctggggtgca
tgatgggaaactcacaaagaatcaataaaaagtgttttaaaagtccagag
cagcagagaattaacaccatacttactgtggaggactgcgagcttcttcc
atgcatgagacctgtgagcccacgatgcttgctccaccaactcttcaata
ctgggggtcaggggttctagtccaggacgcagttagacaagacgatggga
gtggtaaagccaagccaatgcttggaaa
aagtagtgattccaacagtttccagctgtgaacctgtgaaagtttgctat
ctgaaactccagcttcctcatgtgtacaaagaaacaatgaaagtagctac
atttaaactactatctgataaagcatacatgcatgcacagagaaaacatg
cagtaaatgttagtctaggagtgttttgggaagatactagtgcacctttg
agttccaaaaggtagagggagaagatatggaaagggagaggaaaggagga
gaggtagaagagggagctaggtaagagaaggaaggtgagggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_119100229_119101196
seq2: B6Ng01-185B13.b_40_1017

seq1  GAATTCCTGTTACTTACTAAATAAAAATGACACAACACACACAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTTACTTACTAAATAAAAATGACACAACACACACAAAAAAAA  50

seq1  TCCAGAGCTGGTGAAGGCACAGTTGAGCCAGCCCCGCGGGTTGTGGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAGCTGGTGAAGGCACAGTTGAGCCAGCCCCGCGGGTTGTGGGAGC  100

seq1  AGGAGAGCTGGCCCAGCCCCTCACAGGCTGCAGCACTTGGGAGACTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGCTGGCCCAGCCCCTCACAGGCTGCAGCACTTGGGAGACTGGGG  150

seq1  CCTGCACTCTGACTAGGCAGCCCAAGCAGCTGGCTCTGGAGGTGTGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCACTCTGACTAGGCAGCCCAAGCAGCTGGCTCTGGAGGTGTGGGTG  200

seq1  CTGTTGAACCCACCCTGAGGGCATGAGAGCAGAAGAGCTGATCCTGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGAACCCACCCTGAGGGCATGAGAGCAGAAGAGCTGATCCTGCCAC  250

seq1  CTTCCTGTGGCAGCTTTGGGTGGCATAGCTGGAGCAGTGCCAGAGAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTGGCAGCTTTGGGTGGCATAGCTGGAGCAGTGCCAGAGAGCTT  300

seq1  GCCCTGGTGGTTTGGATAAGGGAGAGCCAGCTCAGCTATTAGCCAGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGGTGGTTTGGATAAGGGAGAGCCAGCTCAGCTATTAGCCAGGCCC  350

seq1  AGATCCTGGGCTCTGAATTGGCTCACCTCAAAATCTATATCATCTGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTGGGCTCTGAATTGGCTCACCTCAAAATCTATATCATCTGCAAA  400

seq1  TGGTTGGAACTCATGAAAGGGCCAGTCCTGCTGTCCCAAAGCTGCAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGAACTCATGAAAGGGCCAGTCCTGCTGTCCCAAAGCTGCAGGAT  450

seq1  ATCCATGACACCGGGCAATAAAAGGATAACCAGGAGGAGTCTGGATGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGACACCGGGCAATAAAAGGATAACCAGGAGGAGTCTGGATGAGA  500

seq1  ATCCAGTATTGATGGTGTCATAGAAGCCTTCGATCTCAGAACCCAGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTATTGATGGTGTCATAGAAGCCTTCGATCTCAGAACCCAGAGCA  550

seq1  ATGACTCATTGCAATGAACATTTGCAAGTGAAGATGTGTGGACAGAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTCATTGCAATGAACATTTGCAAGTGAAGATGTGTGGACAGAGGGA  600

seq1  TATAGTGTGGGACACGCTGTGACATGCTACAGCTTCCGCGAGATGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTGTGGGACACGCTGTGACATGCTACAGCTTCCGCGAGATGTTTTC  650

seq1  TATGTTTTTGTTGTTTGTGTATACGTTTTATTTTGTGGGAATGCTGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTTTGTTGTTTGTGTATACGTTTTATTTTGTGGGAATGCTGCAAG  700

seq1  GGCAGAGAGTGGATATGAGGGGACAGGGAGATGAGTGGCTCTGGGGTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGAGTGGATATGAGGGGACAGGGAGATGAGTGGCTCTGGGGTGCA  750

seq1  TGATGGGAAACTCACAAAGAATCAATAAAAAGTGTTTTAAAAGTCCAGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGGAAACTCACAAAGAATCAATAAAAAGTGTTTTAAAAGTCCAGAG  800

seq1  CAGCAGAGAATTAACACCATACTTACTGTGGAGGACTGCGAGCTTC-TCC  849
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CAGCAGAGAATTAACACCATACTTACTGTGGAGGACTGCGAGCTTCTTCC  850

seq1  ATGCATGAGACCTGTGAGCCCACGATGCTGCTTCCACC-ACTCTTCAATA  898
      |||||||||||||||||||||||||||||   |||||| |||||||||||
seq2  ATGCATGAGACCTGTGAGCCCACGATGCTTGCTCCACCAACTCTTCAATA  900

seq1  CTGGGG--CAGGGGTTCTAGT-CAGGACGCAGTTAGACAAGACGAT-GGA  944
      ||||||  ||||||||||||| |||||||||||||||||||||||| |||
seq2  CTGGGGGTCAGGGGTTCTAGTCCAGGACGCAGTTAGACAAGACGATGGGA  950

seq1  GTG--AAAGCC-AGCCAA-GCTTGGAAA  968
      |||  |||||| |||||| |||||||||
seq2  GTGGTAAAGCCAAGCCAATGCTTGGAAA  978

seq1: chr4_119244437_119244731
seq2: B6Ng01-185B13.g_75_369 (reverse)

seq1  TTCCCCCTCACCTTCCTTCTCTTACCTAGCTCCCTCTTCTACCTCTCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTCACCTTCCTTCTCTTACCTAGCTCCCTCTTCTACCTCTCCTC  50

seq1  CTTTCCTCTCCCTTTCCATATCTTCTCCCTCTACCTTTTGGAACTCAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCTCTCCCTTTCCATATCTTCTCCCTCTACCTTTTGGAACTCAAAG  100

seq1  GTGCACTAGTATCTTCCCAAAACACTCCTAGACTAACATTTACTGCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACTAGTATCTTCCCAAAACACTCCTAGACTAACATTTACTGCATGT  150

seq1  TTTCTCTGTGCATGCATGTATGCTTTATCAGATAGTAGTTTAAATGTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTGCATGCATGTATGCTTTATCAGATAGTAGTTTAAATGTAGC  200

seq1  TACTTTCATTGTTTCTTTGTACACATGAGGAAGCTGGAGTTTCAGATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCATTGTTTCTTTGTACACATGAGGAAGCTGGAGTTTCAGATAGC  250

seq1  AAACTTTCACAGGTTCACAGCTGGAAACTGTTGGAATCACTACTT  295
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTCACAGGTTCACAGCTGGAAACTGTTGGAATCACTACTT  295