BAC Information

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BAC

Clone NameB6Ng01-185C04
Chromosome4 (Build37)
Map Location 34,950,436 - 34,951,611
singlet/doubletsinglet
Overlap geneMobkl2b
Upstream geneLOC100041919, LOC100041924, Cnr1, Spaca1, LOC100039220, LOC665361, LOC665367, 2700059D21Rik, Orc3l, Rars2, Slc35a1, 1700003M02Rik, Gm136, 1810030N24Rik, Zfp292, Cga
Downstream geneIfnk, 3110043O21Rik, LOC620559, LOC621227, Lingo2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185C04.bB6Ng01-185C04.g
ACCGA010328GA010329
length1,1801,107
definitionB6Ng01-185C04.b B6Ng01-185C04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaccttaatcttcaccttaagcctgctagaagactggcttccag
gcagctaggaagagggtcttaaagcctacacccacagtgacacacttcct
ccaacagggccacacgtattccaacaaggccacatatcctaacagtgcca
ctccttgggccaagcatattcaattcaccgaaggttggaaatcaagattt
ttaaaaaagcatccttggggaatccagtgtgccattaggaaatggttgga
tctctttcgactccagactacggctttacattgtgcatattggtgataac
atctactgagtgctgactatgaatcagaaccagcaaattatgaaatcctc
acaaggactgtgtcctaggaaggcatcattatgatctccattttacatag
gaagaaatgacagagaaggcaagtttgccaaccaaggctatgctacaagt
accagaggcgtgaatctggggtgccaactacctggctgcagatcttttct
accaactatacagtgagagagctccagaacaagctggtccacatgggcct
gtccaacacattgtaaacagcagctggcagtagctcttctcccaaataac
aggactgcccaaaggactcttagacctgtcagaaccgactctctcaaagc
atttctttgtcttgtctttttttggttttgtgtgtgtgtgtgtgcgcgcg
tgtgtgtgcacatgcacatttttaacttaaactattcggctgagtacaat
gtgtaccaggtaattcctaatgtcatcccttcacttaaaaacaaatctgc
tgtgttaaaattagttttactctgtcatgcaatacttagacaaaatgtca
ttaaatatatcgacataatggctaaaacattaactctggtgaaactctca
atgtgctaactcaatagaacccgccaggccctttccaggagagcaaggtt
agtccctaatactgtttgtgttgtgtccaattctcacccactgtgtggtc
tagaggtttcatgaggagtgacatttttatagtccttttcaatcatatgt
ccttgctttcctctcttggggtcagttcctcaagatcccatgaggaacta
aacacaacaagagattgagatttgctttgttcttacttactgagccaacg
gggacctttttggtccaatggttccattac
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
acaaatgctttctcctcatctaacgagatgatcatgtggtttttgtcttt
gagtttatataatggattacattgatggatttccgtatattgaaccatct
ctgcatccctggaataaaacctacttggtcaggatggatgattgttttga
tgagttcttggattcagttagtgagaattttactgagtatttttgcatca
atattcataagggaaattggtctgaagttctctatctttgttggttcttt
ctgtggtttaggtatcagagtaattgtggcttcatagaatgagttgggta
gagtaccttctgcttctgttttgtggaatagtttgtgaagaactggaatt
agatcttctttgaaggtctgatagaactctgcactaaacccatctggtcc
tgggattttttttggttgggagactattaatgactgcttctatttcttta
ggggatataggactgtttagatcattaacctgatcttgatttaactttgg
tacctggtatctgtctagaaacttgtccatttcatccaggttctccagtt
ttgttgagtatagccttttgtagaaggatctgatggtgttttggatttct
tcaggatctgttgttatgtctcccttttcatttctgattttgttaattag
aatactttccctgtggcctctagtgagtctggctaagggtttatctatct
tgttgattttctctaagaaccagctccttgattggttgattctttgaata
gttcttcttgtttccacttgggttgatttcacccctgagttttgattgtt
tcctgccgtctactcctcttgggtgaatttgcttctttttgttctagagc
ttttaggtgtgtttgtcaagctgctaatgtgtgctctctctagtttcctt
tggaggcactcaaagctatgagttttccccttagaaattgctatcattgt
gtcccaataagtttggtatgtagtggctcattttcataaactcaaaagtc
cctaattcttcttcattccttcttgaacaaggtatcaattgagaaaactg
gtttgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_34950436_34951611
seq2: B6Ng01-185C04.b_34_1213

seq1  GAATTCTACCTTAATCTTCACCTTAAGCCTGCTAGAAGACTGGCTTCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACCTTAATCTTCACCTTAAGCCTGCTAGAAGACTGGCTTCCAG  50

seq1  GCAGCTAGGAAGAGGGTCTTAAAGCCTACACCCACAGTGACACACTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGGAAGAGGGTCTTAAAGCCTACACCCACAGTGACACACTTCCT  100

seq1  CCAACAGGGCCACACGTATTCCAACAAGGCCACATATCCTAACAGTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGGGCCACACGTATTCCAACAAGGCCACATATCCTAACAGTGCCA  150

seq1  CTCCTTGGGCCAAGCATATTCAATTCACCGAAGGTTGGAAATCAAGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTGGGCCAAGCATATTCAATTCACCGAAGGTTGGAAATCAAGATTT  200

seq1  TTAAAAAAGCATCCTTGGGGAATCCAGTGTGCCATTAGGAAATGGTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAGCATCCTTGGGGAATCCAGTGTGCCATTAGGAAATGGTTGGA  250

seq1  TCTCTTTCGACTCCAGACTACGGCTTTACATTGTGCATATTGGTGATAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCGACTCCAGACTACGGCTTTACATTGTGCATATTGGTGATAAC  300

seq1  ATCTACTGAGTGCTGACTATGAATCAGAACCAGCAAATTATGAAATCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACTGAGTGCTGACTATGAATCAGAACCAGCAAATTATGAAATCCTC  350

seq1  ACAAGGACTGTGTCCTAGGAAGGCATCATTATGATCTCCATTTTACATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGACTGTGTCCTAGGAAGGCATCATTATGATCTCCATTTTACATAG  400

seq1  GAAGAAATGACAGAGAAGGCAAGTTTGCCAACCAAGGCTATGCTACAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAATGACAGAGAAGGCAAGTTTGCCAACCAAGGCTATGCTACAAGT  450

seq1  ACCAGAGGCGTGAATCTGGGGTGCCAACTACCTGGCTGCAGATCTTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGGCGTGAATCTGGGGTGCCAACTACCTGGCTGCAGATCTTTTCT  500

seq1  ACCAACTATACAGTGAGAGAGCTCCAGAACAAGCTGGTCCACATGGGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACTATACAGTGAGAGAGCTCCAGAACAAGCTGGTCCACATGGGCCT  550

seq1  GTCCAACACATTGTAAACAGCAGCTGGCAGTAGCTCTTCTCCCAAATAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACACATTGTAAACAGCAGCTGGCAGTAGCTCTTCTCCCAAATAAC  600

seq1  AGGACTGCCCAAAGGACTCTTAGACCTGTCAGAACCGACTCTCTCAAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGCCCAAAGGACTCTTAGACCTGTCAGAACCGACTCTCTCAAAGC  650

seq1  ATTTCTTTGTCTTGTCTTTTTTTGGTTTTGTGTGTGTGTGTGTGCGCGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTGTCTTGTCTTTTTTTGGTTTTGTGTGTGTGTGTGTGCGCGCG  700

seq1  TGTGTGTGCACATGCACATTTTTAACTTAAACTATTCGGCTGAGTACAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCACATGCACATTTTTAACTTAAACTATTCGGCTGAGTACAAT  750

seq1  GTGTACCAGGTAATTCCTAATGTCATCCCTTCACTTAAAAACAAATCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCAGGTAATTCCTAATGTCATCCCTTCACTTAAAAACAAATCTGC  800

seq1  TGTGTTAAAATTAGTTTTACTCTGTCATGCAATACTTAGACAAAATGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTAAAATTAGTTTTACTCTGTCATGCAATACTTAGACAAAATGTCA  850

seq1  TTAAATATATCGACATAATGGCTAAAACATTAACTCTGGTGAAACTCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATATCGACATAATGGCTAAAACATTAACTCTGGTGAAACTCTCA  900

seq1  ATGTGCTAACTCAATAGAACCCGCCAGGCCCTTCCAGGGAGAGCAAGGTT  950
      ||||||||||||||||||||||||||||||||| |  |||||||||||||
seq2  ATGTGCTAACTCAATAGAACCCGCCAGGCCCTTTCCAGGAGAGCAAGGTT  950

seq1  AGTCCCTAATACTGTTTGTGTTGTGTCCAAATTCTCACCCACTGTGTGGT  1000
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGTCCCTAATACTGTTTGTGTTGTGTCC-AATTCTCACCCACTGTGTGGT  999

seq1  CTAGAGGTTTCAATGAGGAGTGACA-TTTTATAGTCCTTTTCAATCAATA  1049
      ||||||||||| ||||||||||||| |||||||||||||||||||| |||
seq2  CTAGAGGTTTC-ATGAGGAGTGACATTTTTATAGTCCTTTTCAATC-ATA  1047

seq1  TGTCCTTGC-TTCCTCTCTTGGGGTCAGT--CTCAAGATCCCATGAGG-A  1095
      ||||||||| |||||||||||||||||||  ||||||||||||||||| |
seq2  TGTCCTTGCTTTCCTCTCTTGGGGTCAGTTCCTCAAGATCCCATGAGGAA  1097

seq1  CCAAACACAAACAAAGAGA-TGAGATTTG-TTTG-TCATACTTACTGAAG  1142
      | ||||||||   |||||| ||||||||| |||| || ||||||||| ||
seq2  CTAAACACAA--CAAGAGATTGAGATTTGCTTTGTTCTTACTTACTG-AG  1144

seq1  CCAACGGGGA-CTTTTGGGTCCAAT-GTCCCATTAC  1176
      |||||||||| ||||| |||||||| || |||||||
seq2  CCAACGGGGACCTTTTTGGTCCAATGGTTCCATTAC  1180