BAC Information

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BAC

Clone NameB6Ng01-185I13
Chromosome4 (Build37)
Map Location 73,084,841 - 73,086,037
singlet/doubletsinglet
Overlap genenone
Upstream geneAldoa-ps2, EG384113, LOC667713, LOC100039698, OTTMUSG00000001246, LOC100039726, LOC667722
Downstream geneLOC623115, OTTMUSG00000000281, OTTMUSG00000000280, OTTMUSG00000000282, OTTMUSG00000000283, Gm428, Rasef, LOC667768, LOC545637, LOC623272, OTTMUSG00000014862, OTTMUSG00000004010, 2310002L09Rik, Frmd3, LOC100039774, Jmjd2c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-185I13.bB6Ng01-185I13.g
ACCGA010617GA010618
length1,2381,188
definitionB6Ng01-185I13.b B6Ng01-185I13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctccaaaacatgtgttaatgagtaggaatgtagggatcttcatct
actatctggcggttcaaggctctcctgtgtgatatggggagaaaagcata
ggagccagatttgaaattgacctctactaacaggaattagtaattacgta
cagtatgacaactactaaaacatgcacatataaagtagtacatttttatg
aaaacatttctccccctccctaaatctgaattttttgcagatcttacaga
aaagttatttgtatccttttaagtcactcaagattatgtacttgctgtcc
tcctgtgtagtcagtttgtttcagtgtagcctacctgttttttttaattt
attattattattatttttttacagtccagactttatcccttcacgaccca
ccctcagaatattccacaccccatccctccttccctgtctccaagaggat
gtccccactcccctacacccactcctccagacctccccactccctgaggc
ctcaagtctcttgagtgttaggcatatcttctctgactgagtctagaccc
agtagtcctctgctgtatatgtgtgctgggcctcatatcagctagtgtag
gctgcctggttggttgctcaatgtctgagagatctcaggggtccaggtta
gttgagactgctggtcacccttcccagcttctgccattttttcctagttt
aaccacaggtgtcaccagcttctgttgattggttgggtgtaaatatctgc
atctaacactttcagctgcttattgggcctttcagagagtagtcatgata
gcctcctgttagtttaattttttgtttgtctaaatgttttcctcttagta
tttattaataatcccattcgtttacatctcaaatcatatctcacttccca
gtaaccacttctatcaactccccttcccatgatacatcatttctcagtta
cccctctgtcacccccctatcctacatctgccctcccactacctttcacc
tgtatgagagtgttctctcacccacccacactctcaccactactccagca
tccccctactctgggggctcaaacctccccttgacaaggacctccttctc
ctttgtctgtcaggcagcatcctctgctacataattatcctagaagctaa
gatccttttaggtacaataccttggttggtgcttagtcctggagtacgag
tgccatctttcaatgggggtgtgtcaaatctctcctca
gaattcttggaagatttagggttgggaaaggtacaaatgatacccacaga
agtgagtagagaaaagtgtgatagattgtgcctgtaaatgccaaagagta
cacaaaatgtaaaaacaggtactcccagaagccataaggtggtttttcag
gagtcccagtacttgaattttgttatttcctaggagttgttgcctgaaga
ggttgttctctttgtctatcagactaggtgaaataatgtaggactgggag
caaaataccacctctctccaaactactccctgtacttccataagttgata
ctaaggatgctaggtagaagtgagccctagagtactactcagctgtggat
cttgcattgtgataaacatgtgaggaatgatgcaccagctgatgaaatag
tggtttcagtagttatagatagatacaactttctaattggacttaaggtc
cacttcgtggagtgatattcatatctaataccaattacttgggtaaaata
tttaaccaaaggaagtcatgggctccagttgagaagtaactgttactggt
taattcactgaggcaccagctaaagtctttccccatacttaatgttccca
atcacaggtgattatctcagttttgtgtcaatttgaagacttttctgttc
cttggttatcttccaaatggaaaagttctcatttggattttgtagtcgaa
aacatatctataagactcactacctaccatattctatagatgaacaaatt
aataaaagacataaagatgtgacttctctattgagcaagaggattataat
catacatataaatcaccccctcaaaggctcagaaatcactggggaagaag
acgtgtgaaaaaattgtaaacatcagaataaaaggagtgaagagggttgt
gagtgactgtcctccaagccaagcaacagccatcttggagagttcagcca
cacccctttgcaaaacatctatatcagctatgcttcttttatacctctgc
atggagagtgtgttagacattgaacaccctcgtctgagtagctagatgct
tctacactattcataacatgctgctttcatgctgtgactagaggaggtta
gaaattactactcatcctctggggtctcaaatctatggttccttgagcct
catctcagaatgtgaagctttctagagtgcaagggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_73084841_73086037
seq2: B6Ng01-185I13.g_68_1255

seq1  GAATTCTTGGAAGATTTAGGGTTGGGAAAGGTACAAATGATACCCACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGAAGATTTAGGGTTGGGAAAGGTACAAATGATACCCACAGA  50

seq1  AGTGAGTAGAGAAAAGTGTGATAGATTGTGCCTGTAAATGCCAAAGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGTAGAGAAAAGTGTGATAGATTGTGCCTGTAAATGCCAAAGAGTA  100

seq1  CACAAAATGTAAAAACAGGTACTCCCAGAAGCCATAAGGTGGTTTTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATGTAAAAACAGGTACTCCCAGAAGCCATAAGGTGGTTTTTCAG  150

seq1  GAGTCCCAGTACTTGAATTTTGTTATTTCCTAGGAGTTGTTGCCTGAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCCAGTACTTGAATTTTGTTATTTCCTAGGAGTTGTTGCCTGAAGA  200

seq1  GGTTGTTCTCTTTGTCTATCAGACTAGGTGAAATAATGTAGGACTGGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGTTCTCTTTGTCTATCAGACTAGGTGAAATAATGTAGGACTGGGAG  250

seq1  CAAAATACCACCTCTCTCCAAACTACTCCCTGTACTTCCATAAGTTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATACCACCTCTCTCCAAACTACTCCCTGTACTTCCATAAGTTGATA  300

seq1  CTAAGGATGCTAGGTAGAAGTGAGCCCTAGAGTACTACTCAGCTGTGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGATGCTAGGTAGAAGTGAGCCCTAGAGTACTACTCAGCTGTGGAT  350

seq1  CTTGCATTGTGATAAACATGTGAGGAATGATGCACCAGCTGATGAAATAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCATTGTGATAAACATGTGAGGAATGATGCACCAGCTGATGAAATAG  400

seq1  TGGTTTCAGTAGTTATAGATAGATACAACTTTCTAATTGGACTTAAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCAGTAGTTATAGATAGATACAACTTTCTAATTGGACTTAAGGTC  450

seq1  CACTTCGTGGAGTGATATTCATATCTAATACCAATTACTTGGGTAAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCGTGGAGTGATATTCATATCTAATACCAATTACTTGGGTAAAATA  500

seq1  TTTAACCAAAGGAAGTCATGGGCTCCAGTTGAGAAGTAACTGTTACTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCAAAGGAAGTCATGGGCTCCAGTTGAGAAGTAACTGTTACTGGT  550

seq1  TAATTCACTGAGGCACCAGCTAAAGTCTTTCCCCATACTTAATGTTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCACTGAGGCACCAGCTAAAGTCTTTCCCCATACTTAATGTTCCCA  600

seq1  ATCACAGGTGATTATCTCAGTTTTGTGTCAATTTGAAGACTTTTCTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAGGTGATTATCTCAGTTTTGTGTCAATTTGAAGACTTTTCTGTTC  650

seq1  CTTGGTTATCTTCCAAATGGAAAAGTTCTCATTTGGATTTTGTAGTCGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTTATCTTCCAAATGGAAAAGTTCTCATTTGGATTTTGTAGTCGAA  700

seq1  AACATATCTATAAGACTCACTACCTACCATATTCTATAGATGAACAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATCTATAAGACTCACTACCTACCATATTCTATAGATGAACAAATT  750

seq1  AATAAAAGACATAAAGATGTGACTTCTCTATTGAGCAAGAGGATTATAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGACATAAAGATGTGACTTCTCTATTGAGCAAGAGGATTATAAT  800

seq1  CATACATATAAATCACCCCCTCAAAGGCTCAGAAATCACTGGGGAAGAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATATAAATCACCCCCTCAAAGGCTCAGAAATCACTGGGGAAGAAG  850

seq1  ACGTGTGAAAAAATTGTAAACATCAGAATAAAAGGAGTGAAGAGGGTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTGAAAAAATTGTAAACATCAGAATAAAAGGAGTGAAGAGGGTTGT  900

seq1  GAGTGACTGTCCTCCAAGCCAAGCAACAGCCATCTTGGAGAGTTCAGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGACTGTCCTCCAAGCCAAGCAACAGCCATCTTGGAGAGTTCAGCCA  950

seq1  CACCCCTTTGCAAAACATCTATATCAGCTATGCTTCTTTTATACCTCTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCTTTGCAAAACATCTATATCAGCTATGCTTCTTTTATACCTCTGC  1000

seq1  ATGGAGAGGTGTGTTAGGACAT--GACACCCTCGTCTGAGTAGCTAGATG  1048
      ||||||| |||||||| |||||   |||||||||||||||||||||||||
seq2  ATGGAGA-GTGTGTTA-GACATTGAACACCCTCGTCTGAGTAGCTAGATG  1048

seq1  CTTTCTACAACCTATTTCATACAATGCTGCTTTCATTGCTGTGACCTTAA  1098
      | |||||||  ||| ||||||  |||||||||||| |||||||| ||  |
seq2  C-TTCTACA--CTA-TTCATAACATGCTGCTTTCA-TGCTGTGA-CTAGA  1092

seq1  GGAGGAGTTAGAATATACTAATTCAATCTCTGGGGTCTC-AATCTATGTT  1147
      ||||  |||||||  |||| | |||  |||||||||||| |||||||| |
seq2  GGAG--GTTAGAAATTACT-ACTCATCCTCTGGGGTCTCAAATCTATGGT  1139

seq1  TCTTTGGGGCCTTCATCTCAGATGTGTGAAGGCTTTCTAG-GTGCA--GG  1194
      || ||| |  | ||||||||||  |||||| ||||||||| |||||  ||
seq2  TCCTTGAG--CCTCATCTCAGA-ATGTGAA-GCTTTCTAGAGTGCAAGGG  1185

seq1  CTA  1197
      |||
seq2  CTA  1188