BAC Information

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BAC

Clone NameB6Ng01-187H01
Chromosome4 (Build37)
Map Location 95,565,566 - 95,566,632
singlet/doubletsinglet
Overlap genenone
Upstream gene4930579C15Rik, LOC100039252, Mysm1, LOC100039265, LOC665029, Jun, LOC100042411, 2310009E04Rik
Downstream geneHook1, Cyp2j13, LOC242546, LOC546837, Cyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187H01.bB6Ng01-187H01.g
ACCGA012021GA012022
length1,096924
definitionB6Ng01-187H01.b B6Ng01-187H01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattactccacctggtgtcgcttgctctcctctggagccggaaa
gggcctcaggagacagctgtggggtcacctcggctgtactgttcagatcc
tcagtgctcttcctaagtagttcatgaacccaagaccagaaacctcagag
ggagtccattatctctgatggcttctgtctctttctgatctctgcttttg
atctatcaccagagcctatggtcagtcttcagcatgcctttcatgtctgg
atattataataaatacttcattcctgcctgtacctcttcacatgctccct
gctatgcttaacattccaagacaccggagggcagcagctgtggcttcttg
gagctcctgggagatgtcaggtccccagagtgcagccctgtcaacctcag
ggcactgtctccctgacacagctctcaccctagctgccctaagcagtgcc
tttgtcactcatccggtgttacttcagcccatgcccttcaacctttctgt
ttcctccttgaatagatacatgctctgcaacatcatctgttagagcctgt
gtgtccttggaatctcagtgcaggcatgatatccatgaggaccgtgggca
tgcagaaacatacagtaggaaacctccaggaatgccacgctcctcatctg
gattctcagagccccataacagccccttgggctaggagatttccatctct
ccaccctggtgtgggttgcttttctaaggaggcagaaagggtctcaggag
acagctatgggatcacctttgctgtgctattcttcctcatactgataagc
agagtggacaagaaggctggttaataggaacagttcttatcttgcccctg
tcactttacctgacagagttctttggtaactttagcagactaataatatg
ttctttgtacattaaactaaagttgaatattttcttccccaagctgcaaa
ttagtcctaaccagtctaatcaggtcaaattcccaactcattgctgaaag
gaatccatggtgtttttgaagtttttaatatctgaagtgtgcatgtacag
gtgctaaatgaaacctttcaagtttatttgggttggtattgtttac
gaattcattgtttttaatagctgactagtactccattgtgtaaccacatt
ttctgtatccattcctctgttgaaggacatctgggttctttccagcttct
gactattataaataaggctgctatgcacatagtggagcatgtgtctgttg
tgcccacctcggccggcaaggaagacacaacatggttggattcttctcaa
cagcctttattgcaggaacgtttcgatgctgttacagggaccctgggaac
ccagggaggtctgcttatatacaccccagcacagggaaaggcttcatgtc
cttctgggataggttgaactgctgtcacctaattagcatgtacccgctcg
ggaggggttggcgccagactcaggcttacgcctatgcagtggtgttgttt
atgacaacggcacatcggaaaccggcaccatcttagagttggcttcctac
atgtgtccttattacatgttggatcatcttttgggtatatgcccaggagt
ggtattgctgggttctcaggcagtactatgtctaattttctgcggaacca
caagactgttttccacaatggctgtaccagcttggctgtcccacagccct
cctctttttattttaaccatgttaaataaatctcctatgttctgttttac
ttttattaattggatgatttaactgccttatccaggagagatggccaatg
gtttcatgctgagaacatgccatcatttctctgtgacagcatggatttat
ttctgggtcctctatgtactacacatatgcttttgtgccaataccccact
ttattttgttactatgacttaatagtgcagttgtactatgagaccttcag
caagttttcttctgttcaggattggtttaacttactaaagctttctgtgc
ttctataggacttttatgattgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95565566_95566632
seq2: B6Ng01-187H01.b_47_1142

seq1  GAATTCCATTACTCCACCTGGTGTCGCTTGCTCTCCTCTGGAGCCGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTACTCCACCTGGTGTCGCTTGCTCTCCTCTGGAGCCGGAAA  50

seq1  GGGCCTCAGGAGACAGCTGTGGGGTCACCTCGGCTGTACTGTTCAGATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCTCAGGAGACAGCTGTGGGGTCACCTCGGCTGTACTGTTCAGATCC  100

seq1  TCAGTGCTCTTCCTAAGTAGTTCATGAACCCAAGACCAGAAACCTCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTCTTCCTAAGTAGTTCATGAACCCAAGACCAGAAACCTCAGAG  150

seq1  GGAGTCCATTATCTCTGATGGCTTCTGTCTCTTTCTGATCTCTGCTTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTCCATTATCTCTGATGGCTTCTGTCTCTTTCTGATCTCTGCTTTTG  200

seq1  ATCTATCACCAGAGCCTATGGTCAGTCTTCAGCATGCCTTTCATGTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCACCAGAGCCTATGGTCAGTCTTCAGCATGCCTTTCATGTCTGG  250

seq1  ATATTATAATAAATACTTCATTCCTGCCTGTACCTCTTCACATGCTCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATAATAAATACTTCATTCCTGCCTGTACCTCTTCACATGCTCCCT  300

seq1  GCTATGCTTAACATTCCAAGACACCGGAGGGCAGCAGCTGTGGCTTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGCTTAACATTCCAAGACACCGGAGGGCAGCAGCTGTGGCTTCTTG  350

seq1  GAGCTCCTGGGAGATGTCAGGTCCCCAGAGTGCAGCCCTGTCAACCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCTGGGAGATGTCAGGTCCCCAGAGTGCAGCCCTGTCAACCTCAG  400

seq1  GGCACTGTCTCCCTGACACAGCTCTCACCCTAGCTGCCCTAAGCAGTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTGTCTCCCTGACACAGCTCTCACCCTAGCTGCCCTAAGCAGTGCC  450

seq1  TTTGTCACTCATCCGGTGTTACTTCAGCCCATGCCCTTCAACCTTTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACTCATCCGGTGTTACTTCAGCCCATGCCCTTCAACCTTTCTGT  500

seq1  TTCCTCCTTGAATAGATACATGCTCTGCAACATCATCTGTTAGAGCCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCTTGAATAGATACATGCTCTGCAACATCATCTGTTAGAGCCTGT  550

seq1  GTGTCCTTGGAATCTCAGTGCAGGCATGATATCCATGAGGACCGTGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTTGGAATCTCAGTGCAGGCATGATATCCATGAGGACCGTGGGCA  600

seq1  TGCAGAAACATACAGTAGGAAACCTCCAGGAATGCCACGCTCCTCATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAAACATACAGTAGGAAACCTCCAGGAATGCCACGCTCCTCATCTG  650

seq1  GATTCTCAGAGCCCCATAACAGCCCCTTGGGCTAGGAGATTTCCATCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCAGAGCCCCATAACAGCCCCTTGGGCTAGGAGATTTCCATCTCT  700

seq1  CCA-CCTGGTGTGGGTTGCTTTTCTAAGGAGGCAGAAAGGGTCTCAGGAG  749
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGGTGTGGGTTGCTTTTCTAAGGAGGCAGAAAGGGTCTCAGGAG  750

seq1  ACAGCTATGGGATCACCTTTGCTGTGCTATTCTTCCTCATACTGATAAGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTATGGGATCACCTTTGCTGTGCTATTCTTCCTCATACTGATAAGC  800

seq1  AGAGTGGACAAGAAGGCTGGTT-ATAGGAACAGTTCTTATCTTGCCCCTG  848
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGAGTGGACAAGAAGGCTGGTTAATAGGAACAGTTCTTATCTTGCCCCTG  850

seq1  TCAC-TTACCTGACAGAGTTC-TTGGTAAC-TTAGCAGACTAATAATATG  895
      |||| |||||||||||||||| |||||||| |||||||||||||||||||
seq2  TCACTTTACCTGACAGAGTTCTTTGGTAACTTTAGCAGACTAATAATATG  900

seq1  TTCTTTGTACA-TAAACT-AAGTTGAATA-TTTCTT-CCCAAGCTGCAAA  941
      ||||||||||| |||||| |||||||||| |||||| |||||||||||||
seq2  TTCTTTGTACATTAAACTAAAGTTGAATATTTTCTTCCCCAAGCTGCAAA  950

seq1  -TAG-CCTAACCAGTCT-ATCAAGTCAAA-TCCCAACTCATTGCTGAAA-  986
       ||| |||||||||||| |||| |||||| ||||||||||||||||||| 
seq2  TTAGTCCTAACCAGTCTAATCAGGTCAAATTCCCAACTCATTGCTGAAAG  1000

seq1  GAATCCATTGTTGTTTTGA--GTTTTAATATCTGA--TGTGCA-GGACA-  1030
      |||||||| ||  ||||||   |||||||||||||  |||||| | ||| 
seq2  GAATCCATGGTGTTTTTGAAGTTTTTAATATCTGAAGTGTGCATGTACAG  1050

seq1  GTG-TAAA--GAACCTTTCAAG--TAATTG----GGTGATGTTTAC  1067
      ||| ||||   |||||||||||  || |||    |||  |||||||
seq2  GTGCTAAATGAAACCTTTCAAGTTTATTTGGGTTGGTATTGTTTAC  1096