BAC Information

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BAC

Clone NameB6Ng01-187M07
Chromosome4 (Build37)
Map Location 93,068,051 - 93,201,281
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC620269, LOC384125, Tusc1
Downstream gene5830433M19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-187M07.bB6Ng01-187M07.g
ACCGA012256GA012257
length1,1131,044
definitionB6Ng01-187M07.b B6Ng01-187M07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(93,068,051 - 93,069,162)(93,200,234 - 93,201,281)
sequence
gaattctccagcctctaagctgccagcaaactgtatgggcttccactgtt
acagcattcacaaaagttcaccctaatggagatgggctttctggtgacac
gtttacttttgagtcctggagcttctattagtaacctccttactcataag
gggacacataagggggttttgttagtacacataacaagaaggtaatggtt
gactaagttgcattctggtataagtgatactttggtatgccgtggctaac
atatctggatgtgcatatatgtgtagatatccacagtgatctgtggatca
ctagattgtttcagatctgagaggaaagaaaaatccaccagagttttgga
aggaagaaaagacatgctcatttcaaggggcataaacacgtgaggtccct
attcagaaacatgccaacacaaatgatcaagattgacaccatatacttac
atctctgtatgaacctatatgttgtcactatttttataaaccctaaaaag
actaaaataaaatttgactatatgctaatcattaaacaatacattacaaa
atttggtaggactttggacagcagaactatagattaacaattaaaaatgt
ctccttcaaacaaatcaaggaaatttaatgttagaacggggaaatttttc
tctgattctcttgtactaccgggtacactttttaaaaggtaaaacaaagt
tagaaaactaagttaacaattttgacaactgaataacagtcatttccgat
tcttcttatatttattaagaaagtccagttaataaaagtagcactaggtc
tgcttcctcacgtcagccaaatcagtggccccatactcttcctcctacac
cctacatcctatgagcctcccaggaggtcaaaagtaacccaagggcacag
gagacctgataaccacagacagtgctgcttgccttcaaggaggttggctc
cagtcagagaaacccaggccagttaatgccagagataaccagatggccag
aggcaagcacaaggtcattaagtgacagattccagtgcattcagcacatc
agacccaggttcttccaccacagcagccctgataacataaataaaccttg
aaaagccaaaaca

gaattctccacaggtcagggagccttgcagatattgagggattttgtgtt
gtgtaatttcctatattttactgaatatccaccaaagaaaattcccaact
tccctttgtaaagaaaaaaaaaaccaaattaccaaatggtccaggcccca
ataatgcaagtaattcctctacccatttgtgtcatttttcaaaagtctac
aaggatttacatctactcgacaaaatgttaatttatgcttcaggaaaaag
aacagaggaatatatatcttgaggtgctctcctttttcactttgaatctg
agttctgtactaacttaaaaaatggaataaatttacaaaatagacatcaa
atactcaacagagagggagaaaaaggtccctatttatcatgttcttgcga
ctgtggctgagtgatatattgtgattacaactttttttaattggcaggct
tctaggatgcgctggggattggtgacaagatgatggatcagtttcttcat
attggctggttgatccaacaaacccaaagcacatattgacatttgtcact
cagcattggagccctacagacatctctgctgattagtcaaacacttcacc
tccctttaattaatgttttaagagcagagcttcagagagatgctcaaggg
aagaaatttttacaatataatggaaaagggggtttacagggaaccacttg
aataaggagtgagcatagccaggaagggagaaatcaatgacagtgtttta
gcagcttaaccctgctggcccttgcatgttaatagattatttatgcatca
cattgctatgagaagaaattagtatgattagcattttctgtttattgact
gctcatcacaaatcggaagactgtttacatgtattttgggtttattacct
tgaaaaatcattggcaggaaggcaggacaagaatttatcatctcataaac
tcaagcttattttacctttaagagaaaggtataatgacagaaatatattt
tcgcactgtgttgtaaagaaaagagatttttttttttttatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_93068051_93069162
seq2: B6Ng01-187M07.b_46_1158

seq1  GAATTCTCCAGCCTCTAAGCTGCCAGCAAACTGTATGGGCTTCCACTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGCCTCTAAGCTGCCAGCAAACTGTATGGGCTTCCACTGTT  50

seq1  ACAGCATTCACAAAAGTTCACCCTAATGGAGATGGGCTTTCTGGTGACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTCACAAAAGTTCACCCTAATGGAGATGGGCTTTCTGGTGACAC  100

seq1  GTTTACTTTTGAGTCCTGGAGCTTCTATTAGTAACCTCCTTACTCATAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTTTGAGTCCTGGAGCTTCTATTAGTAACCTCCTTACTCATAAG  150

seq1  GGGACACATAAGGGGGTTTTGTTAGTACACATAACAAGAAGGTAATGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACATAAGGGGGTTTTGTTAGTACACATAACAAGAAGGTAATGGTT  200

seq1  GACTAAGTTGCATTCTGGTATAAGTGATACTTTGGTATGCCGTGGCTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAGTTGCATTCTGGTATAAGTGATACTTTGGTATGCCGTGGCTAAC  250

seq1  ATATCTGGATGTGCATATATGTGTAGATATCCACAGTGATCTGTGGATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGGATGTGCATATATGTGTAGATATCCACAGTGATCTGTGGATCA  300

seq1  CTAGATTGTTTCAGATCTGAGAGGAAAGAAAAATCCACCAGAGTTTTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTGTTTCAGATCTGAGAGGAAAGAAAAATCCACCAGAGTTTTGGA  350

seq1  AGGAAGAAAAGACATGCTCATTTCAAGGGGCATAAACACGTGAGGTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAAAAGACATGCTCATTTCAAGGGGCATAAACACGTGAGGTCCCT  400

seq1  ATTCAGAAACATGCCAACACAAATGATCAAGATTGACACCATATACTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAAACATGCCAACACAAATGATCAAGATTGACACCATATACTTAC  450

seq1  ATCTCTGTATGAACCTATATGTTGTCACTATTTTTATAAACCCTAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTATGAACCTATATGTTGTCACTATTTTTATAAACCCTAAAAAG  500

seq1  ACTAAAATAAAATTTGACTATATGCTAATCATTAAACAATACATTACAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAATAAAATTTGACTATATGCTAATCATTAAACAATACATTACAAA  550

seq1  ATTTGGTAGGACTTTGGACAGCAGAACTATAGATTAACAATTAAAAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTAGGACTTTGGACAGCAGAACTATAGATTAACAATTAAAAATGT  600

seq1  CTCCTTCAAACAAATCAAGGAAATTTAATGTTAGAACGGGGAAATTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCAAACAAATCAAGGAAATTTAATGTTAGAACGGGGAAATTTTTC  650

seq1  TCTGATTCTCTTGTACTACCGGGTACACTTTTTAAAAGGTAAAACAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCTCTTGTACTACCGGGTACACTTTTTAAAAGGTAAAACAAAGT  700

seq1  TAGAAAACTAAGTTAACAATTTTGACAACTGAATAACAGTCATTTCCGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAACTAAGTTAACAATTTTGACAACTGAATAACAGTCATTTCCGAT  750

seq1  TCTTCTTATATTTATTAAGAAAGTCCAGTTAATAAAAGTAGCACTAGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTATATTTATTAAGAAAGTCCAGTTAATAAAAGTAGCACTAGGTC  800

seq1  TGCTTCCTCACGTCAGCCAAATCAGTGGCCCCATACTCTTCCTCCTACAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTCACGTCAGCCAAATCAGTGGCCCCATACTCTTCCTCCTACAC  850

seq1  CCTACATCCTATGAGCCTCCCAGGAGGTCAAAAGTAA-CCAAGGGCACAG  899
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCTACATCCTATGAGCCTCCCAGGAGGTCAAAAGTAACCCAAGGGCACAG  900

seq1  GAGACCTGATAACCACAGACAGTGCTGCTTGCCTTCAAGGAGGTTGGCTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCTGATAACCACAGACAGTGCTGCTTGCCTTCAAGGAGGTTGGCTC  950

seq1  CAGTCAGAGAAACCCAGGCCAGTTAATGCCAGAGATAACCAGATGGCCAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGAGAAACCCAGGCCAGTTAATGCCAGAGATAACCAGATGGCCAG  1000

seq1  AGGCAAGCACAAGGTCA-TAAGTGACAGAATCCAGTGCAATTCAGCACCA  1048
      ||||||||||||||||| ||||||||||| |||||||| |||||||| ||
seq2  AGGCAAGCACAAGGTCATTAAGTGACAGATTCCAGTGC-ATTCAGCA-CA  1048

seq1  TCAGAACCCAGTTCTTCCACCACAGCAAGGCCTGGATAACAT-AATAAA-  1096
      ||||| ||  |||||||||||||||||  |||  |||||||| |||||| 
seq2  TCAGACCCAGGTTCTTCCACCACAGCA--GCCCTGATAACATAAATAAAC  1096

seq1  CTTGAAAAG-CAAAACA  1112
      ||||||||| |||||||
seq2  CTTGAAAAGCCAAAACA  1113


seq1: chr4_93200234_93201281
seq2: B6Ng01-187M07.g_66_1109 (reverse)

seq1  GAAATTAAAAAAAAAAAATCTCTTTTCTTTACAACACAGTGCG-AAATAT  49
      ||||| ||||||||||||||||||||||||||||||||||||| ||||||
seq2  GAAATAAAAAAAAAAAAATCTCTTTTCTTTACAACACAGTGCGAAAATAT  50

seq1  ATTTCTGTTCATTTATACCTTTCTTCTTTAAGGTAAAATAAGCTTTGAGT  99
      ||||||| ||| ||||||||||| |||| |||||||||||||| ||||||
seq2  ATTTCTG-TCA-TTATACCTTTC-TCTTAAAGGTAAAATAAGC-TTGAGT  96

seq1  TTATGAGATGATAAATTCTTGTCCTGCCCTTCCTTGCCAATGATTTTTCA  149
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  TTATGAGATGATAAATTCTTGTCCTG-CCTTCC-TGCCAATGATTTTTCA  144

seq1  AGGTAATAAACCC-AAATACATGTAAACAGTCTTCCGATTTGTGATGAGC  198
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGGTAATAAACCCAAAATACATGTAAACAGTCTTCCGATTTGTGATGAGC  194

seq1  AGTCAATAAACAGAAAATGCTAATCATACTAATTTCTTCTCATAGCAATG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAATAAACAGAAAATGCTAATCATACTAATTTCTTCTCATAGCAATG  244

seq1  TGATGCATAAATAATCTATTAACATGCAAGGGCCAGCAGGGTTAAGCTGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCATAAATAATCTATTAACATGCAAGGGCCAGCAGGGTTAAGCTGC  294

seq1  TAAAACACTGTCATTGATTTCTCCCTTCCTGGCTATGCTCACTCCTTATT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACACTGTCATTGATTTCTCCCTTCCTGGCTATGCTCACTCCTTATT  344

seq1  CAAGTGGTTCCCTGTAAACCCCCTTTTCCATTATATTGTAAAAATTTCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGTTCCCTGTAAACCCCCTTTTCCATTATATTGTAAAAATTTCTT  394

seq1  CCCTTGAGCATCTCTCTGAAGCTCTGCTCTTAAAACATTAATTAAAGGGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGAGCATCTCTCTGAAGCTCTGCTCTTAAAACATTAATTAAAGGGA  444

seq1  GGTGAAGTGTTTGACTAATCAGCAGAGATGTCTGTAGGGCTCCAATGCTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGTGTTTGACTAATCAGCAGAGATGTCTGTAGGGCTCCAATGCTG  494

seq1  AGTGACAAATGTCAATATGTGCTTTGGGTTTGTTGGATCAACCAGCCAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAAATGTCAATATGTGCTTTGGGTTTGTTGGATCAACCAGCCAAT  544

seq1  ATGAAGAAACTGATCCATCATCTTGTCACCAATCCCCAGCGCATCCTAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAACTGATCCATCATCTTGTCACCAATCCCCAGCGCATCCTAGA  594

seq1  AGCCTGCCAATTAAAAAAAGTTGTAATCACAATATATCACTCAGCCACAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCCAATTAAAAAAAGTTGTAATCACAATATATCACTCAGCCACAG  644

seq1  TCGCAAGAACATGATAAATAGGGACCTTTTTCTCCCTCTCTGTTGAGTAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAAGAACATGATAAATAGGGACCTTTTTCTCCCTCTCTGTTGAGTAT  694

seq1  TTGATGTCTATTTTGTAAATTTATTCCATTTTTTAAGTTAGTACAGAACT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTCTATTTTGTAAATTTATTCCATTTTTTAAGTTAGTACAGAACT  744

seq1  CAGATTCAAAGTGAAAAAGGAGAGCACCTCAAGATATATATTCCTCTGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTCAAAGTGAAAAAGGAGAGCACCTCAAGATATATATTCCTCTGTT  794

seq1  CTTTTTCCTGAAGCATAAATTAACATTTTGTCGAGTAGATGTAAATCCTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCCTGAAGCATAAATTAACATTTTGTCGAGTAGATGTAAATCCTT  844

seq1  GTAGACTTTTGAAAAATGACACAAATGGGTAGAGGAATTACTTGCATTAT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTTTTGAAAAATGACACAAATGGGTAGAGGAATTACTTGCATTAT  894

seq1  TGGGGCCTGGACCATTTGGTAATTTGGTTTTTTTTTTCTTTACAAAGGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCCTGGACCATTTGGTAATTTGGTTTTTTTTTTCTTTACAAAGGGA  944

seq1  AGTTGGGAATTTTCTTTGGTGGATATTCAGTAAAATATAGGAAATTACAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGGAATTTTCTTTGGTGGATATTCAGTAAAATATAGGAAATTACAC  994

seq1  AACACAAAATCCCTCAATATCTGCAAGGCTCCCTGACCTGTGGAGAATTC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACAAAATCCCTCAATATCTGCAAGGCTCCCTGACCTGTGGAGAATTC  1044


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