BAC Information

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BAC

Clone NameB6Ng01-189L13
Chromosome4 (Build37)
Map Location 28,069,997 - 28,071,098
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040691, Tpm3-rs2
Downstream geneLOC100040842, LOC100040735, LOC230044, LOC665141, LOC100040773, Epha7, LOC100040907
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-189L13.bB6Ng01-189L13.g
ACCGA013666GA013667
length1,0231,102
definitionB6Ng01-189L13.b B6Ng01-189L13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggataagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactgataagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaaattatgaaattcctagtcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggagtgaggtaacacatctacacaatggagtactactcagctattaaaaa
gaatgaatttatgaaattctttttcaaaattttaatagagtcataaaatg
tgatagctcttatagcaaaaaatctggtaatttgtgaaaaaatcaaaaca
aaaactgcatggtagcatgatcaagcaattctctatattcaatgatattg
aaagaatttacatgggaatctccatgacacaattgaatacacatgtttat
atagcagtatttttataacagccagacactgaaagcaacctaagcattca
ctgatactccattcaaatctaccactggcaatacacattgtaaattttaa
aactccataaaatatgaaataaaactattattttttttttctttttttga
attttaaaatttttattggtatttttattatttacatttcaaatgtcatc
aatttcctgtttttgcctcaaaa
gaattccatagtgtagtgatcaccacagtcacctaacaacttgaaatcaa
cactaataaataaatataagggctttcagttaaaaacaaaaaacaataat
ggtgaccaagcgtgaggagtagggaatcagcatctcaataaatttctgtg
ggacaaatattagaaaaatgacatcaaaaagaacaatagatcgcttagaa
aagtaagagctaactggagtctctcctctgagtatattctactaaatatt
tattataagcaacatgcttcaaaatttttcagaatttccataactcaaac
aataaccagtgccttataattagcagcaaagagtctgtgttctgggttgt
tataacatacagtcaatccattaggtgcacaacaccgtgtggtgtgaggc
gagaataattagacaccagatggtgataccagctccaatagcgaatgccg
atgcattatgcatgagaagtgactttagtgttgtttcttatccatttggt
agcattatgctgctcttggacctcaatccacgtctctaaaactttgtatc
tggcatttctgttttaacaaacggtaacatcaccttgtcctaagccaatc
agctgcatcttactctgcatgcagaacagacactcttccagcagtgccgc
ggagctgcatgtttgcattgtctttcagatctgaggttagtgagtaaaaa
attatgcctctgcagcagcataatgtttgagagtagtatctttaaaaatg
gaatcagatttttcatgattgtgtgtcacaattctgagctgaggtccttt
taaaatatcattagtggagatgtgattaatcatgttatgtcttctgaata
ctaaaaatacctttttattttcattacagatgcaatgaatttgaaactag
aaatgagtgagagcatatagagattggatggtgataaatctcattaaagg
ttattaattcttcaacagagagatcaaagatctcttttgatttatttatc
ttgatactttttaagaaaatgacaacttttcaaggtgaaggagatgctga
ttcaaagttatgataccgtgaacaaccacagactggcttatgtgaccttt
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_28069997_28071098
seq2: B6Ng01-189L13.g_70_1171

seq1  GAATTCCATAGTGTAGTGATCACCACAGTCACCTAACAACTTGAAATCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGTGTAGTGATCACCACAGTCACCTAACAACTTGAAATCAA  50

seq1  CACTAATAAATAAATATAAGGGCTTTCAGTTAAAAACAAAAAACAATAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAATAAATAAATATAAGGGCTTTCAGTTAAAAACAAAAAACAATAAT  100

seq1  GGTGACCAAGCGTGAGGAGTAGGGAATCAGCATCTCAATAAATTTCTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACCAAGCGTGAGGAGTAGGGAATCAGCATCTCAATAAATTTCTGTG  150

seq1  GGACAAATATTAGAAAAATGACATCAAAAAGAACAATAGATCGCTTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAATATTAGAAAAATGACATCAAAAAGAACAATAGATCGCTTAGAA  200

seq1  AAGTAAGAGCTAACTGGAGTCTCTCCTCTGAGTATATTCTACTAAATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAGCTAACTGGAGTCTCTCCTCTGAGTATATTCTACTAAATATT  250

seq1  TATTATAAGCAACATGCTTCAAAATTTTTCAGAATTTCCATAACTCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAAGCAACATGCTTCAAAATTTTTCAGAATTTCCATAACTCAAAC  300

seq1  AATAACCAGTGCCTTATAATTAGCAGCAAAGAGTCTGTGTTCTGGGTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCAGTGCCTTATAATTAGCAGCAAAGAGTCTGTGTTCTGGGTTGT  350

seq1  TATAACATACAGTCAATCCATTAGGTGCACAACACCGTGTGGTGTGAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATACAGTCAATCCATTAGGTGCACAACACCGTGTGGTGTGAGGC  400

seq1  GAGAATAATTAGACACCAGATGGTGATACCAGCTCCAATAGCGAATGCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAATTAGACACCAGATGGTGATACCAGCTCCAATAGCGAATGCCG  450

seq1  ATGCATTATGCATGAGAAGTGACTTTAGTGTTGTTTCTTATCCATTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATTATGCATGAGAAGTGACTTTAGTGTTGTTTCTTATCCATTTGGT  500

seq1  AGCATTATGCTGCTCTTGGACCTCAATCCACGTCTCTAAAACTTTGTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTATGCTGCTCTTGGACCTCAATCCACGTCTCTAAAACTTTGTATC  550

seq1  TGGCATTTCTGTTTTAACAAACGGTAACATCACCTTGTCCTAAGCCAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTCTGTTTTAACAAACGGTAACATCACCTTGTCCTAAGCCAATC  600

seq1  AGCTGCATCTTACTCTGCATGCAGAACAGACACTCTTCCAGCAGTGCCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCATCTTACTCTGCATGCAGAACAGACACTCTTCCAGCAGTGCCGC  650

seq1  GGAGCTGCATGTTTGCATTGTCTTTCAGATCTGAGGTTAGTGAGTAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGCATGTTTGCATTGTCTTTCAGATCTGAGGTTAGTGAGTAAAAA  700

seq1  ATTATGCCTCTGCAGCAGCATAATGTTTGAGAGTAGTATCTTTAAAAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGCCTCTGCAGCAGCATAATGTTTGAGAGTAGTATCTTTAAAAATG  750

seq1  GAATCAGATTTTTCATGATTGTGTGTCACAATTCTGAGCTGAGGTCCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAGATTTTTCATGATTGTGTGTCACAATTCTGAGCTGAGGTCCTTT  800

seq1  TAAAATATCATTAGTGGAGATGTGATTAATCATGTTATGTCTTCTGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATCATTAGTGGAGATGTGATTAATCATGTTATGTCTTCTGAATA  850

seq1  CTAAAAATACC-TTTTATTTTCATTACAGATGCAATGAATTTGAAACTAG  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATACCTTTTTATTTTCATTACAGATGCAATGAATTTGAAACTAG  900

seq1  AAATGAGTGAGAGCATATAGAGATTGGATGGTGATAAATCTCATTAAA-G  948
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AAATGAGTGAGAGCATATAGAGATTGGATGGTGATAAATCTCATTAAAGG  950

seq1  TTATTAATTCTTCAACAGAGAGATCAAAAGATCTCTTTTGATTTATTTAT  998
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTATTAATTCTTCAACAGAGAGATC-AAAGATCTCTTTTGATTTATTTAT  999

seq1  CTTGATAC-TTTTAAGAAAATGACAACTTTTCAGGGTGAAGGAAGATGCT  1047
      |||||||| |||||||||||||||||||||||| |||||||| |||||||
seq2  CTTGATACTTTTTAAGAAAATGACAACTTTTCAAGGTGAAGG-AGATGCT  1048

seq1  GATTCCAAAGTTATGATACCGTG-ACCACCACAGACTGCGTAATGTTGAC  1096
      |||| |||||||||||||||||| || |||||||||||  | ||| ||||
seq2  GATT-CAAAGTTATGATACCGTGAACAACCACAGACTGGCTTATG-TGAC  1096

seq1  CTTTGA  1102
      ||||||
seq2  CTTTGA  1102