BAC Information

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BAC

Clone NameB6Ng01-193O11
Chromosome4 (Build37)
Map Location 17,925,848 - 17,926,979
singlet/doubletsinglet
Overlap geneMmp16
Upstream geneLOC667212, LOC100040173
Downstream geneLOC667251, LOC435772
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-193O11.bB6Ng01-193O11.g
ACCGA016742GA016743
length1,1141,083
definitionB6Ng01-193O11.b B6Ng01-193O11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccactgctttccaaatccaaagtccccaaatccacattctttcaa
ataaaagcatggtcaggcctatcacagcaataccccagtccctggtacca
acttctgtcttagttagggttttactgctgtgaacagataccatgaccaa
ggcaagtcttataaaaaacaacatttaatttggtctggcttacagattca
gagattcagtcccttaccatcaaggtgagagcatggcagcatccaggcag
gcatggtgcaggaggagctgagaattctatgtcttcacccaaaggctgct
agtggaagactgacttccaggcaactagggtgagaatcttatgcccacac
ccacagtgacacacctactccaaccaggtcacacctattccaacaaggtc
acacctccaaatggtgccactccctggcccaagaatatacaaaccatcac
agttagtaactgtggtaagcactataaccactttatcttgtttattttat
tttattttttgttatttattgaagtcggtatccttctgtgctaccttcaa
tgatgcaaattgatgtcccacctaggatgatagttactttattgggatat
attatggctacttatttacccactgaagtactacgtcctatagagttgtg
gtatgaacaaaaagagttctcagctctgtgagataataacaaataaaatt
taggaccctggtcttaggaaatacataggagtgcacaggttaaaaaacta
tataaatgctatataaatgtgataactatgtaaataggatggtaatcaca
cacacacacacacacacacacacacacacacaagtaaatcaggatcgtct
atgacattctagaaaaccagagagtattgttaaagaaataattcttatag
ccgagacctataaagagatttgaaagaaattattaaggcaatgggataga
aatggaaggtacttcagaaaaagtatgccagaaatacctcaatcaaagtg
tgtgatagagaggattttatatactgcctatttccataaaacccttaatg
agatgtaaagataactttagtgcttgattttttattatctagattaagta
tttgtttattacct

gaattcacttcacactagtcagaatggctaagatcaaaaattcaggtgac
agcagaggctggcaagaatgtggagaaagacggtcactcctacattgttg
gtgggattagaagctggtacaaccactctggaaatcaggctggtggttta
tcagaaaattggacatagtactaccagaagatccagcaatttgtctcctg
ggcatatacccagaagatgtcccaacttgtaataaggacacatgctccac
tatgttcatagcagccttatttataatagccagaagctggaaggaaccca
gatgtccctcaacagaagaatggatacagaaaatgtggtacatttacaca
atggaatactactcagcaattaaaaataatgagttcatgaaattcttagg
caaatggatggatatggaggatattaacctgagtgaggtaacacagtaac
aaaagaacatacatgatatgcactcactgatatgcggatattagcccaga
tacttagaatgtccaagatacaatttgcaaaacacatgaaactcaagaag
aaagcagactaaagtgtggatactttgctccttcttagaatagggaacaa
aatacccatggaagaagttacagagacaaaattcagagctgagacagaag
gaaagaccatccagagactgccccacctggggatccatcccatatacaac
caccaaacccagacactattgcatatgccagaaagattttgatgaagggg
ccctgttatagctatgaggcgatgccagtgcctggcaaatacagaagtgg
atgctcacagtcatctctaagatggaacacagggcccccaatggagaagc
tagagaaagcacccaaagagctgaaggggtctgcaaccctatagtggaac
acaacgtgaactaacctgtacccccagagctcatgtctctagctgcatat
gtagcagaagatgggcctagttgtcatcattgggaagagaggcccttgct
ctgcgacttatatgtcccagtacagggatgcaaggcaagaagcaaggtgt
ggggtgggtaagggagcatcatggggggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_17925848_17926979
seq2: B6Ng01-193O11.b_47_1160

seq1  GAATTCCACTGCTTTCCAAATCCAAAGTCCCCAAATCCACATTCTTTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGCTTTCCAAATCCAAAGTCCCCAAATCCACATTCTTTCAA  50

seq1  ATAAAAGCATGGTCAGGCCTATCACAGCAATACCCCAGTCCCTGGTACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGCATGGTCAGGCCTATCACAGCAATACCCCAGTCCCTGGTACCA  100

seq1  ACTTCTGTCTTAGTTAGGGTTTTACTGCTGTGAACAGATACCATGACCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTGTCTTAGTTAGGGTTTTACTGCTGTGAACAGATACCATGACCAA  150

seq1  GGCAAGTCTTATAAAAAACAACATTTAATTTGGTCTGGCTTACAGATTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTCTTATAAAAAACAACATTTAATTTGGTCTGGCTTACAGATTCA  200

seq1  GAGATTCAGTCCCTTACCATCAAGGTGAGAGCATGGCAGCATCCAGGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCAGTCCCTTACCATCAAGGTGAGAGCATGGCAGCATCCAGGCAG  250

seq1  GCATGGTGCAGGAGGAGCTGAGAATTCTATGTCTTCACCCAAAGGCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGCAGGAGGAGCTGAGAATTCTATGTCTTCACCCAAAGGCTGCT  300

seq1  AGTGGAAGACTGACTTCCAGGCAACTAGGGTGAGAATCTTATGCCCACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAAGACTGACTTCCAGGCAACTAGGGTGAGAATCTTATGCCCACAC  350

seq1  CCACAGTGACACACCTACTCCAACCAGGTCACACCTATTCCAACAAGGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGACACACCTACTCCAACCAGGTCACACCTATTCCAACAAGGTC  400

seq1  ACACCTCCAAATGGTGCCACTCCCTGGCCCAAGAATATACAAACCATCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTCCAAATGGTGCCACTCCCTGGCCCAAGAATATACAAACCATCAC  450

seq1  AGTTAGTAACTGTGGTAAGCACTATAACCACTTTATCTTGTTTATTTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTAACTGTGGTAAGCACTATAACCACTTTATCTTGTTTATTTTAT  500

seq1  TTTATTTTTTGTTATTTATTGAAGTCGGTATCCTTCTGTGCTACCTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTTTGTTATTTATTGAAGTCGGTATCCTTCTGTGCTACCTTCAA  550

seq1  TGATGCAAATTGATGTCCCACCTAGGATGATAGTTACTTTATTGGGATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCAAATTGATGTCCCACCTAGGATGATAGTTACTTTATTGGGATAT  600

seq1  ATTATGGCTACTTATTTACCCACTGAAGTACTACGTCCTATAGAGTTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGGCTACTTATTTACCCACTGAAGTACTACGTCCTATAGAGTTGTG  650

seq1  GTATGAACAAAAAGAGTTCTCAGCTCTGTGAGATAATAACAAATAAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAACAAAAAGAGTTCTCAGCTCTGTGAGATAATAACAAATAAAATT  700

seq1  TAGGACCCTGGTCTTAGGAAATACATAGGAGTGCACAGGTTAAAAAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGACCCTGGTCTTAGGAAATACATAGGAGTGCACAGGTTAAAAAACTA  750

seq1  TATAAATGCTATATAAATGTGATAACTATGTAAATAGGATGGTAAT--CA  798
      ||||||||||||||||||||||||||||||||||||||||||||||  ||
seq2  TATAAATGCTATATAAATGTGATAACTATGTAAATAGGATGGTAATCACA  800

seq1  CACACACACACACACACACACACACACACACAAGTAAATCAGGATCGTCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACAAGTAAATCAGGATCGTCT  850

seq1  ATGACATTCTAGAAAACCAGAGAGTATTGTTAAAGAAATAATTCTTATAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACATTCTAGAAAACCAGAGAGTATTGTTAAAGAAATAATTCTTATAG  900

seq1  CCGAGACCTATAAGGAGATTTGAAAGAAATTATTAAGGCAAT-GGATAGA  947
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  CCGAGACCTATAAAGAGATTTGAAAGAAATTATTAAGGCAATGGGATAGA  950

seq1  AATGGAAGGTACTTCAGGAAAAAGGTATGCCAGAAATACCTCAATCAAAG  997
      |||||||||||||||||  |||| ||||||||||||||||||||||||||
seq2  AATGGAAGGTACTTCAG--AAAAAGTATGCCAGAAATACCTCAATCAAAG  998

seq1  TGTGTGATTAGAAGAGGAATTTTATAATACTTGCTATTTTCATAAAAACC  1047
      ||||||| ||| ||||| ||||||| |||||  |||||| |||||||  |
seq2  TGTGTGA-TAG-AGAGG-ATTTTAT-ATACTGCCTATTTCCATAAAA--C  1042

seq1  CCTTAATGAGATGTTAAAAGATAACTTTAATTTGTTTTGGTTTTTTTTTA  1097
      ||||||||||||||  |||||||||||||        || ||  ||||| 
seq2  CCTTAATGAGATGT--AAAGATAACTTTA-------GTGCTTGATTTTTT  1083

seq1  TTTATCTAGTATAAGTTATTTGTGTTTATTTACCT  1132
       ||||||||  |||| ||||  |||||| ||||||
seq2  ATTATCTAGATTAAG-TATT--TGTTTA-TTACCT  1114


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