BAC Information

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BAC

Clone NameB6Ng01-202G16
Chromosome4 (Build37)
Map Location 83,162,077 - 83,163,202
singlet/doubletsinglet
Overlap genenone
Upstream geneZdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik, Snapc3, Psip1, LOC100040611
Downstream gene4930473A06Rik, LOC668010, Bnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202G16.bB6Ng01-202G16.g
ACCGA022913GA022914
length1,2021,123
definitionB6Ng01-202G16.b B6Ng01-202G16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgccaatttctgagtatatctatcccaattatacattctggaac
tggggaaatcaccacaggatgtgtccggggacctactggacctactgtga
gtcggacatcagtcaaaactccattaatcacctgccctccataagcccct
actttaactggagggccacaatgtttcttgggatcccctgggatcagtgt
caactcagaaccagtatccagcagaccccgaaaagtctgattatttcctt
ttccccagtgtacagttacccttgtaaaaggccgtaggtccctctgggga
agaactggagaaagggtaacagcaaaacctttgagtgtcttatcaagatc
cttcctcagcggaacctggccaccccttcattcaaggggttctggatctg
caaactgtctcaagtctggaaattgattcactggccgagattgctgttta
ccacgatctaatgtagcctttctttcatttggctgtttaccacgatctaa
tgtagcctttctttcatttgtttgagaatttttctgcttatacagatcaa
acaaatatgcagtaggcttcctatgtatttcattcctggaaacaccatga
ttggttagccagtaccaaaggtccaaccgagtcatgccattataaatttc
acctctcctgtgctgaccattactgggtatgttattataaacattctttt
gtctacgctgtccattataataactagaatcaccttgtctcgggcgattc
aatgctgccacctggcccttgttacctcggaatccaactaaacccagtga
atttaattcatctaattgagcagaagcatctccaatgctaagatctggca
caaggaaaagggaaagaacaaaacccttcatcaacactaagccatggaat
atcacgcatctccaagtcatttccagtaggccatcttttgataacacctc
agccaaccattcaaacaaacttttgacaccttttttaactatgcgagctt
ccgtattaaacctagaatctctactcagaggacccatgtcaataactcag
cctgctctagtttttatgttcctcacccttatcccacaccgtaaaatcaa
ttccacacataattcacagtttctgcttgaatggaatagcactcattaag
cttcataggtagttagcgaattcttctaaggaacatactcactctttctt
ac
gaattcctgttctcacatgtggggaggggcatacgcatgtgcacacaccc
gtgtgcagaaacacgttctttttaaataatttagtattaatggagttctg
taatcttatcaatgagaaagacttgatgggctgatttaagttttaaattc
cttatgttcagtcggcttatctgtaagttactatgtgtttttccttgttt
tcattttatgtgtttgggtgtttttcctccatgtctgtctgtgcaccatg
ttcatgcactgcccatggaagccagaagaggatgtcagatcccctgagcc
tggagttccaaatgcttgtgagctgccgtgtgcgtgctggaaactgaacc
caggtcccctggacccgtagccagtgctcctaactgccgagtcatctctg
cagcccctaatttgctatttgaaaaattggaatttgtatttctctttctg
caaccaaatgagttactcgctctagacttttggtatacttataaatcatt
tggcaagattttttttttaaagagttgagaaactgggggactgatattgc
gatataaagtgaatacataaataaaacagagttgagaaactaacaatcct
taccattaactgccataggtaacatttactatttgtcaatgggacctaga
gatgaagtcaaggctctcacatatgctaagttcatcttctatctggaata
tactttagactcttttgtaagtatctcttgccttcgaaagaaatagccta
caggcaactcttctcaattatctctcccacatgtaagcaccaaagtgtaa
ataatccgatggaacttcctttcaatttactaagatagccacacattcag
ccagacttgataaggtcttttttttttttaaataatttattttttatttt
gtgtagattggttttttgcttgcacgtatgtgtttatgacagtattgaat
cccctggaacagataacagacagggggctagtgagatggctcagtggtag
agtacccgactgctctccgaagtccggagttcaatcccagcaaccacatg
gtggcttcaccacatctgtaccaggatctggacgccccttctttctgagt
gtctgaagaccgctacagtgtac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_83162077_83163202
seq2: B6Ng01-202G16.g_67_1189 (reverse)

seq1  GTACACTGTAGCTGTCTTCAGACACTCCAGAAGA--GGGCGT-CAGATCT  47
      |||||||||||| ||||||||||||||   ||||  |||||| |||||| 
seq2  GTACACTGTAGCGGTCTTCAGACACTCAGAAAGAAGGGGCGTCCAGATCC  50

seq1  TGTTACAGATGGTTGTG-AGCCACCATGTGGTTGCTGGGATTTGAACTCC  96
      || ||||||| || ||| |||||||||||||||||||||| |||||||||
seq2  TGGTACAGAT-GTGGTGAAGCCACCATGTGGTTGCTGGGA-TTGAACTCC  98

seq1  GGACCTTCGGAAGAGCAGTCGGGTACTCTTACCCACTGAGCCATCTCACT  146
      ||| |||||| ||||||||||||||||||   ||||||||||||||||||
seq2  GGA-CTTCGG-AGAGCAGTCGGGTACTCT--ACCACTGAGCCATCTCACT  144

seq1  AGCCCCCTGTCTGTTATTCTTGTTCCAGGGGATTCAATACTGTCATAAAC  196
      |||||||||||||||||   ||||||||||||||||||||||||||||||
seq2  AGCCCCCTGTCTGTTAT--CTGTTCCAGGGGATTCAATACTGTCATAAAC  192

seq1  ACATACGTGCAAGCAAAAAACCAATCTACACAAAAT-AAAAATAAATTAT  245
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACATACGTGCAAGCAAAAAACCAATCTACACAAAATAAAAAATAAATTAT  242

seq1  TTAAAAAAAAAAAAGACCTTATCAAGTCTGGCTGAATGTGTGGCTATCTT  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAAAAAAAAGACCTTATCAAGTCTGGCTGAATGTGTGGCTATCTT  292

seq1  AGTAAATTGAAAGGAAGTTCCATCGGATTATTTACACTTTGGTGCTTACA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATTGAAAGGAAGTTCCATCGGATTATTTACACTTTGGTGCTTACA  342

seq1  TGTGGGAGAGATAATTGAGAAGAGTTGCCTGTAGGCTATTTCTTTCGAAG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAGAGATAATTGAGAAGAGTTGCCTGTAGGCTATTTCTTTCGAAG  392

seq1  GCAAGAGATACTTACAAAAGAGTCTAAAGTATATTCCAGATAGAAGATGA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAGATACTTACAAAAGAGTCTAAAGTATATTCCAGATAGAAGATGA  442

seq1  ACTTAGCATATGTGAGAGCCTTGACTTCATCTCTAGGTCCCATTGACAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCATATGTGAGAGCCTTGACTTCATCTCTAGGTCCCATTGACAAA  492

seq1  TAGTAAATGTTACCTATGGCAGTTAATGGTAAGGATTGTTAGTTTCTCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAATGTTACCTATGGCAGTTAATGGTAAGGATTGTTAGTTTCTCAA  542

seq1  CTCTGTTTTATTTATGTATTCACTTTATATCGCAATATCAGTCCCCCAGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTTTATTTATGTATTCACTTTATATCGCAATATCAGTCCCCCAGT  592

seq1  TTCTCAACTCTTTAAAAAAAAAATCTTGCCAAATGATTTATAAGTATACC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACTCTTTAAAAAAAAAATCTTGCCAAATGATTTATAAGTATACC  642

seq1  AAAAGTCTAGAGCGAGTAACTCATTTGGTTGCAGAAAGAGAAATACAAAT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCTAGAGCGAGTAACTCATTTGGTTGCAGAAAGAGAAATACAAAT  692

seq1  TCCAATTTTTCAAATAGCAAATTAGGGGCTGCAGAGATGACTCGGCAGTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATTTTTCAAATAGCAAATTAGGGGCTGCAGAGATGACTCGGCAGTT  742

seq1  AGGAGCACTGGCTACGGGTCCAGGGGACCTGGGTTCAGTTTCCAGCACGC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCACTGGCTACGGGTCCAGGGGACCTGGGTTCAGTTTCCAGCACGC  792

seq1  ACACGGCAGCTCACAAGCATTTGGAACTCCAGGCTCAGGGGATCTGACAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACGGCAGCTCACAAGCATTTGGAACTCCAGGCTCAGGGGATCTGACAT  842

seq1  CCTCTTCTGGCTTCCATGGGCAGTGCATGAACATGGTGCACAGACAGACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTGGCTTCCATGGGCAGTGCATGAACATGGTGCACAGACAGACA  892

seq1  TGGAGGAAAAACACCCAAACACATAAAATGAAAACAAGGAAAAACACATA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGAAAAACACCCAAACACATAAAATGAAAACAAGGAAAAACACATA  942

seq1  GTAACTTACAGATAAGCCGACTGAACATAAGGAATTTAAAACTTAAATCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTACAGATAAGCCGACTGAACATAAGGAATTTAAAACTTAAATCA  992

seq1  GCCCATCAAGTCTTTCTCATTGATAAGATTACAGAACTCCATTAATACTA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCAAGTCTTTCTCATTGATAAGATTACAGAACTCCATTAATACTA  1042

seq1  AATTATTTAAAAAGAACGTGTTTCTGCACACGGGTGTGTGCACATGCGTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTTAAAAAGAACGTGTTTCTGCACACGGGTGTGTGCACATGCGTA  1092

seq1  TGCCCCTCCCCACATGTGAGAACAGGAATTC  1126
      |||||||||||||||||||||||||||||||
seq2  TGCCCCTCCCCACATGTGAGAACAGGAATTC  1123