BAC Information

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BAC

Clone NameB6Ng01-203D24
Chromosome4 (Build37)
Map Location 9,135,252 - 9,322,926
singlet/doubletdoublet
Overlap geneLOC100039584, 4933402J24Rik
Upstream geneCar8, LOC100039505, LOC100039478, Rab2, EG666752, LOC666760, Chd7, LOC666782
Downstream geneAsph, Gdf6, 4930448K20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203D24.bB6Ng01-203D24.g
ACCGA023517GA023518
length1,0281,115
definitionB6Ng01-203D24.b B6Ng01-203D24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(9,322,331 - 9,322,926)(9,135,252 - 9,136,367)
sequence
gaattcaatgaataaataaaaacactgggaaacttttgtaaaatttaatg
gaaacatttacaagtaggataaagtaaatagaagatacaactgtattgtg
tagttcttactaccctgctttaaactccaggcagaccaaaccccacacaa
attcccttggatccacagataaaacaacacacacacacacacacacacac
acacacacacacacacacacacattaacttatttccaacctgccttattg
actcaatttctgggcacttctagacttctgcagctagcatgccattccca
atactcatagctcagcaccctaaatctgccctcagtttattatgtttcta
atcttccacctggggaagcggcctatgaccactccaccagagatctcaca
tggctggtcaccttttgtccctctgaagcatggtaaaaatatccctttct
ctttttgcatctcctagccttcctacaaggaccagaaagttctgcctttt
tcctttcaccctgcaattggtccctggcatctttattgatcaatcaaaaa
ccaattggagaataggactttaagtatcagacctactccctacatacagt
atcagagcttgatggcaagagatagatgaatcagaaaattcagatcataa
taaaaatacaaggtaaaaatagaacatttaaggtctattaaaattagaaa
attaaatttatgaattatgaatatagaaggaaaagtacaagttaaagcca
tagaaatatacgataaggtcatggcagaattttctcaaatctaggggaaa
atatgattatccagatacaaataaatagttagacacaaagaataaagaag
ctgaaagagcgtccctgagtcacattataatgaaaacacagagtatataa
aacagcatcaaaagtctgttgaagctgaaagcataacaacttctacatga
aacatactcctcaaaataatagcaggtttctctattcacataatccccaa
ttatgtgcttatgcttaaaaggcaataa

gaattctaagatcttggtgagccagtgtgaggagcgggtgtggcagcagt
cccaagaaggtgctagggactgcagctaagtcttatgagttgcacctgac
ttcctcatacacctgaaaataagccacaaccatcgtgagagctgcacagg
tgcaccaggatactggtgaatccattttggtggagacatgcccctgctgc
cctgattagctgaagctgtgtgcctggtgaggtgacgtggcctgctgtga
gtggatgagggctgagagtatataagagtgagaggcccgggttagagaga
gagataaagttgagagagaaaaagttgaagcgagagagatgaagacagaa
gtttgctgaataaactgctgttagaaggactggtggtcgtgtcgttcttg
ctggtcgagagcggatgcgacaagccagtttttattccaaaggattgttc
taagttctcatcagttatctttccagttttataggaatggaataagacca
cgagacttgaaccagaagcaaaaattcttagggttcttttttccccctta
cagaatacagcgtttgaacagtaagaggaaaatgcattctgacaacagtc
atgtactccaggctttgtgtacagcctccagtgatctgagccacttagct
gggcattgtccacattgtaggacaaaataattagttagacttaaagggaa
ctggggcttcagctgagcccacaggcacctcacacgctgtgttaattcca
agtttccatttgctcctgtgatggagtgtcctcctggctagggaattgct
caatgtagcataagaaaagcaatgtccactacttctaattatgctgtggg
atacactggcttcttttcagattatataatctttagtcttttacagttcc
atcaggaagctgagtggagcactgagtcccacaaggtcgcctttccctag
ttctgaaagcatttatttcatgcaggctttcaggagaaatgaaaatttca
aagtcttgattttaggttatagaatacaagggcaatagtcactaacttta
attgtggtgaattataattcacttagtccattttgccttcggagcaatca
atggagtagaagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_9322331_9322926
seq2: B6Ng01-203D24.b_46_641 (reverse)

seq1  TATGTAGGGAGTAGGTCTGATACTTAAAGTCCTATTCTCCAATTGGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGGGAGTAGGTCTGATACTTAAAGTCCTATTCTCCAATTGGTTTT  50

seq1  TGATTGATCAATAAAGATGCCAGGGACCAATTGCAGGGTGAAAGGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGATCAATAAAGATGCCAGGGACCAATTGCAGGGTGAAAGGAAAAA  100

seq1  GGCAGAACTTTCTGGTCCTTGTAGGAAGGCTAGGAGATGCAAAAAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAACTTTCTGGTCCTTGTAGGAAGGCTAGGAGATGCAAAAAGAGAA  150

seq1  AGGGATATTTTTACCATGCTTCAGAGGGACAAAAGGTGACCAGCCATGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATATTTTTACCATGCTTCAGAGGGACAAAAGGTGACCAGCCATGTG  200

seq1  AGATCTCTGGTGGAGTGGTCATAGGCCGCTTCCCCAGGTGGAAGATTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCTGGTGGAGTGGTCATAGGCCGCTTCCCCAGGTGGAAGATTAGA  250

seq1  AACATAATAAACTGAGGGCAGATTTAGGGTGCTGAGCTATGAGTATTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAATAAACTGAGGGCAGATTTAGGGTGCTGAGCTATGAGTATTGGG  300

seq1  AATGGCATGCTAGCTGCAGAAGTCTAGAAGTGCCCAGAAATTGAGTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATGCTAGCTGCAGAAGTCTAGAAGTGCCCAGAAATTGAGTCAAT  350

seq1  AAGGCAGGTTGGAAATAAGTTAATGTGTGTGTGTGTGTGTGTGTGTGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGTTGGAAATAAGTTAATGTGTGTGTGTGTGTGTGTGTGTGTGT  400

seq1  GTGTGTGTGTGTGTGTGTGTTGTTTTATCTGTGGATCCAAGGGAATTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTTGTTTTATCTGTGGATCCAAGGGAATTTGT  450

seq1  GTGGGGTTTGGTCTGCCTGGAGTTTAAAGCAGGGTAGTAAGAACTACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTTTGGTCTGCCTGGAGTTTAAAGCAGGGTAGTAAGAACTACACA  500

seq1  ATACAGTTGTATCTTCTATTTACTTTATCCTACTTGTAAATGTTTCCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTTGTATCTTCTATTTACTTTATCCTACTTGTAAATGTTTCCATT  550

seq1  AAATTTTACAAAAGTTTCCCAGTGTTTTTATTTATTCATTGAATTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTACAAAAGTTTCCCAGTGTTTTTATTTATTCATTGAATTC  596


seq1: chr4_9135252_9136367
seq2: B6Ng01-203D24.g_66_1180

seq1  GAATTCTAAGATCTTGGTGAGCCAGTGTGAGGAGCGGGTGTGGCAGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGATCTTGGTGAGCCAGTGTGAGGAGCGGGTGTGGCAGCAGT  50

seq1  CCCAAGAAGGTGCTAGGGACTGCAGCTAAGTCTTATGAGTTGCACCTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGAAGGTGCTAGGGACTGCAGCTAAGTCTTATGAGTTGCACCTGAC  100

seq1  TTCCTCATACACCTGAAAATAAGCCACAACCATCGTGAGAGCTGCACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCATACACCTGAAAATAAGCCACAACCATCGTGAGAGCTGCACAGG  150

seq1  TGCACCAGGATACTGGTGAATCCATTTTGGTGGAGACATGCCCCTGCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCAGGATACTGGTGAATCCATTTTGGTGGAGACATGCCCCTGCTGC  200

seq1  CCTGATTAGCTGAAGCTGTGTGCCTGGTGAGGTGACGTGGCCTGCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTAGCTGAAGCTGTGTGCCTGGTGAGGTGACGTGGCCTGCTGTGA  250

seq1  GTGGATGAGGGCTGAGAGTATATAAGAGTGAGAGGCCCGGGTTAGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGAGGGCTGAGAGTATATAAGAGTGAGAGGCCCGGGTTAGAGAGA  300

seq1  GAGATAAAGTTGAGAGAGAAAAAGTTGAAGCGAGAGAGATGAAGACAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAAGTTGAGAGAGAAAAAGTTGAAGCGAGAGAGATGAAGACAGAA  350

seq1  GTTTGCTGAATAAACTGCTGTTAGAAGGACTGGTGGTCGTGTCGTTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTGAATAAACTGCTGTTAGAAGGACTGGTGGTCGTGTCGTTCTTG  400

seq1  CTGGTCGAGAGCGGATGCGACAAGCCAGTTTTTATTCCAAAGGATTGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCGAGAGCGGATGCGACAAGCCAGTTTTTATTCCAAAGGATTGTTC  450

seq1  TAAGTTCTCATCAGTTATCTTTCCAGTTTTATAGGAATGGAATAAGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCTCATCAGTTATCTTTCCAGTTTTATAGGAATGGAATAAGACCA  500

seq1  CGAGACTTGAACCAGAAGCAAAAATTCTTAGGGTTCTTTTTTCCCCCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGACTTGAACCAGAAGCAAAAATTCTTAGGGTTCTTTTTTCCCCCTTA  550

seq1  CAGAATACAGCGTTTGAACAGTAAGAGGAAAATGCATTCTGACAACAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATACAGCGTTTGAACAGTAAGAGGAAAATGCATTCTGACAACAGTC  600

seq1  ATGTACTCCAGGCTTTGTGTACAGCCTCCAGTGATCTGAGCCACTTAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTCCAGGCTTTGTGTACAGCCTCCAGTGATCTGAGCCACTTAGCT  650

seq1  GGGCATTGTCCACATTGTAGGACAAAATAATTAGTTAGACTTAAAGGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTGTCCACATTGTAGGACAAAATAATTAGTTAGACTTAAAGGGAA  700

seq1  CTGGGGCTTCAGCTGAGCCCACAGGCACCTCACACGCTGTGTTAATTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCTTCAGCTGAGCCCACAGGCACCTCACACGCTGTGTTAATTCCA  750

seq1  AGTTTCCATTTGCTCCTGTGATGGAGTGTCCTCCTGGCTA-GGAATTGCT  799
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTTTCCATTTGCTCCTGTGATGGAGTGTCCTCCTGGCTAGGGAATTGCT  800

seq1  CAATGTAGCATAAAGAAAAAGCAATGTCCACTACTTCTAATTATGCTGTG  849
      |||||||||||||   ||||||||||||||||||||||||||||||||||
seq2  CAATGTAGCATAA--GAAAAGCAATGTCCACTACTTCTAATTATGCTGTG  848

seq1  GGATACACTGGCTTCTTTTCAGATTATATAAATCTTTAGTCTTTTACAGT  899
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGATACACTGGCTTCTTTTCAGATTATAT-AATCTTTAGTCTTTTACAGT  897

seq1  TCCATCAGGAAGCTGAGTGGAGCCACTGAGTCCCACAAGGTCGCCTTTCC  949
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TCCATCAGGAAGCTGAGTGGAG-CACTGAGTCCCACAAGGTCGCCTTTCC  946

seq1  CTAGTTCTGAAAGCATTTATTTCATGCAGGCTTTCAAGAAGAAAATGAAA  999
      |||||||||||||||||||||||||||||||||||| ||   ||||||||
seq2  CTAGTTCTGAAAGCATTTATTTCATGCAGGCTTTCAGGA--GAAATGAAA  994

seq1  AATTCAAAGTCTGAATTTTA-GTTATAG-ATACAAGGGCAATAGTCACTA  1047
      | ||||||||||  |||||| ||||||| |||||||||||||||||||||
seq2  ATTTCAAAGTCTTGATTTTAGGTTATAGAATACAAGGGCAATAGTCACTA  1044

seq1  ACTTTAATTGTGGTGAA-TATAA-TCACTAGGTTCATTTTGCCTTCAGAG  1095
      ||||||||||||||||| ||||| |||||  || |||||||||||| |||
seq2  ACTTTAATTGTGGTGAATTATAATTCACTTAGTCCATTTTGCCTTCGGAG  1094

seq1  CATTCAAATGGAGTAG-AGATG  1116
      || || |||||||||| |||||
seq2  CAATC-AATGGAGTAGAAGATG  1115


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