BAC Information

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BAC

Clone NameB6Ng01-205A19
Chromosome4 (Build37)
Map Location 82,683,321 - 82,831,473
singlet/doubletdoublet
Overlap geneLOC667985
Upstream geneEG545641, Nfib, Zdhhc21, Cer1, Frem1
Downstream gene1810054D07Rik, Snapc3, Psip1, LOC100040611, 4930473A06Rik, LOC668010
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-205A19.bB6Ng01-205A19.g
ACCGA024833GA024834
length1,079770
definitionB6Ng01-205A19.b B6Ng01-205A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,830,393 - 82,831,473)(82,683,321 - 82,683,974)
sequence
tgtgtcaagatggcaaaacaaacaaaccaacccccccccccaacaaaaaa
caaaaacaaaaacaaaatgaagcaaaacaaaacccaaaatattggtgctt
tgactgtttttttcattatatatgagaagaccctgatcttctttatagaa
tcccatgtgaacagtgacagttcccggtgcactaccatgtatcctgcaga
attgttaattcagtttgcattagagcgtctcttcttccacaaataatact
aacagtaatggttctgcttccagcacgctggccaagagttttaaaagcat
ttcagtctttatttgtgtccgtgtcacagtggaacctatgacctatttgg
gatctgaaagttcagcaccagccatatgaacagcgtagggaggctccagt
agttagcttctagttgtctgccttttacctcccttccttgggccctccct
tgcacaagactgaaagatgggtgtcggcaaaccctgggaaacgaccatag
gggcatttgtttcttatcattgtgctcagggccttctctttgagactaag
aattgaagtgacttgcccaaacaaatatggctgttcacagtggaactagg
cccgaggtttctgaataaactactgtactggccaaaacccggtttcctta
gtaaaaagctcttgcctgtctcttttcacccagattaacttgtttgcctc
acgctcttcctggagtttggagtccttgttagcacttgcatgctttctct
gctgctctgttggccccaggagtatttctccccacccctccgatccattg
atgttagcaacagaaacatgggatgtttaaaagaagagaatggtctagaa
acatggggacattcttctgtgggccagttgctgcctttcgtgtcttaggg
acagggctggctcttgagggagccacagccactggattctcactcatggc
tgacgtggaatttactattgcagtcagtatggccttgaaattgacttcaa
tcctctttgcctcagcatcctgaacacatgggatcacagggtgagtcaca
ggtaccactctgtcaaagaattctgattg
gaattcactctgtagaccaggctggcctcaaactcagaaatctgcctccc
aagtgctgggattaaaggtgtttgccaccactgcccggctcaagctgcct
tctaaaaggctgtcatcagctttgggcagaacagtttcttcttgtaacag
tcagaggtatctagaaattcataactgatcacagtacatgaaataagatg
tggctgaatgctcagatgtaagtgggacatttcatatcacttccaccaag
tctcctagaatataaccaaatagaaagaatgtaagaggccgaggaaagga
tggagtgtcgtaggacacttgtagggagccatcccaggctgtaaacaggt
cagccggatggaaatctattccaggcagtaaacaagcccatgtttggtgg
atggcccgcccttaatccctgattagctgagcaagcctgcctggtgaggt
gatgtgacctgtggtgattggtgggggcatggttgtggctggagaaaaac
acttgtaactagagaggctggggcattttaagtaagtagctgcctgagta
aactgctttaagaagaaccggtggttgtgttttgcttgctggtcaactgg
gacacgacagacactaacttgcttgctggtcgaatgggacgtgacagaca
ctaacttcccagcacgacatcacgatgtgtctttttcagcttaagttcat
ggcagctgtgatacccaacctagcttcttcaccaggatattggggctttg
tcgacattcctgtcaataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_82830393_82831473
seq2: B6Ng01-205A19.b_57_1135 (reverse)

seq1  CAATCAGAAATCTCTGGACAGAGCTGGCTACTGTGACTCACACCTGTGAT  50
      ||||||||| ||| | ||||||| |||   ||||||||||| ||||||||
seq2  CAATCAGAATTCT-TTGACAGAG-TGGTACCTGTGACTCAC-CCTGTGAT  47

seq1  CCCATGTGTTCAGGATGCTGAGGC-AAGAGGATTGAAGTCAATTTCAAGG  99
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCCATGTGTTCAGGATGCTGAGGCAAAGAGGATTGAAGTCAATTTCAAGG  97

seq1  CCATACTGGACTGC-ATAGTAAATTCCACGTCAGCCATGAGTGAGAATCC  148
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  CCATACT-GACTGCAATAGTAAATTCCACGTCAGCCATGAGTGAGAATCC  146

seq1  AGTGGCTGTGGCTCCCTCAAGAGCCAGCCCTGTCCCCTAAGACACGAAAG  198
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGTGGCTGTGGCTCCCTCAAGAGCCAGCCCTGT-CCCTAAGACACGAAAG  195

seq1  GCAGCAACTGGCCCACAGAAGAATGTCCCCATGTTTCTAGACCATTCTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAACTGGCCCACAGAAGAATGTCCCCATGTTTCTAGACCATTCTCT  245

seq1  TCTTTTAAACATCCCATGTTTCTGTTGCTAACATCAATGGATCGGAGGGG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTAAACATCCCATGTTTCTGTTGCTAACATCAATGGATCGGAGGGG  295

seq1  TGGGGAGAAATACTCCTGGGGCCAACAGAGCAGCAGAGAAAGCATGCAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAGAAATACTCCTGGGGCCAACAGAGCAGCAGAGAAAGCATGCAAG  345

seq1  TGCTAACAAGGACTCCAAACTCCAGGAAGAGCGTGAGGCAAACAAGTTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACAAGGACTCCAAACTCCAGGAAGAGCGTGAGGCAAACAAGTTAA  395

seq1  TCTGGGTGAAAAGAGACAGGCAAGAGCTTTTTACTAAGGAAACCGGGTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTGAAAAGAGACAGGCAAGAGCTTTTTACTAAGGAAACCGGGTTT  445

seq1  TGGCCAGTACAGTAGTTTATTCAGAAACCTCGGGCCTAGTTCCACTGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGTACAGTAGTTTATTCAGAAACCTCGGGCCTAGTTCCACTGTGA  495

seq1  ACAGCCATATTTGTTTGGGCAAGTCACTTCAATTCTTAGTCTCAAAGAGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCATATTTGTTTGGGCAAGTCACTTCAATTCTTAGTCTCAAAGAGA  545

seq1  AGGCCCTGAGCACAATGATAAGAAACAAATGCCCCTATGGTCGTTTCCCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTGAGCACAATGATAAGAAACAAATGCCCCTATGGTCGTTTCCCA  595

seq1  GGGTTTGCCGACACCCATCTTTCAGTCTTGTGCAAGGGAGGGCCCAAGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGCCGACACCCATCTTTCAGTCTTGTGCAAGGGAGGGCCCAAGGA  645

seq1  AGGGAGGTAAAAGGCAGACAACTAGAAGCTAACTACTGGAGCCTCCCTAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGTAAAAGGCAGACAACTAGAAGCTAACTACTGGAGCCTCCCTAC  695

seq1  GCTGTTCATATGGCTGGTGCTGAACTTTCAGATCCCAAATAGGTCATAGG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCATATGGCTGGTGCTGAACTTTCAGATCCCAAATAGGTCATAGG  745

seq1  TTCCACTGTGACACGGACACAAATAAAGACTGAAATGCTTTTAAAACTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGTGACACGGACACAAATAAAGACTGAAATGCTTTTAAAACTCT  795

seq1  TGGCCAGCGTGCTGGAAGCAGAACCATTACTGTTAGTATTATTTGTGGAA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAGCGTGCTGGAAGCAGAACCATTACTGTTAGTATTATTTGTGGAA  845

seq1  GAAGAGACGCTCTAATGCAAACTGAATTAACAATTCTGCAGGATACATGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGACGCTCTAATGCAAACTGAATTAACAATTCTGCAGGATACATGG  895

seq1  TAGTGCACCGGGAACTGTCACTGTTCACATGGGATTCTATAAAGAAGATC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCACCGGGAACTGTCACTGTTCACATGGGATTCTATAAAGAAGATC  945

seq1  AGGGTCTTCTCATATATAATGAAAAAAACAGTCAAAGCACCAATATTTTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTTCTCATATATAATGAAAAAAACAGTCAAAGCACCAATATTTTG  995

seq1  GGTTTTGTTTTGCTTCATTTTGTTTTTGTTTTTGTTTTTTGTT-GGGGGG  1047
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GGTTTTGTTTTGCTTCATTTTGTTTTTGTTTTTGTTTTTTGTTGGGGGGG  1045

seq1  GGGGTTGGTTTGTTTGTTTTGCCATCTTGACACA  1081
      ||||||||||||||||||||||||||||||||||
seq2  GGGGTTGGTTTGTTTGTTTTGCCATCTTGACACA  1079

seq1: chr4_82683321_82683974
seq2: B6Ng01-205A19.g_180_836

seq1  CATCAGCTTTGGGCAGAACAGTTTCTTCTTGTAACAGTCAGAGGTATCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGCTTTGGGCAGAACAGTTTCTTCTTGTAACAGTCAGAGGTATCTA  50

seq1  GAAATTCATAACTGATCACAGTACATGAAATAAGATGTGGCTGAATGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTCATAACTGATCACAGTACATGAAATAAGATGTGGCTGAATGCTC  100

seq1  AGATGTAAGTGGGACATTTCATATCACTTCCACCAAGTCTCCTAGAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTAAGTGGGACATTTCATATCACTTCCACCAAGTCTCCTAGAATAT  150

seq1  AACCAAATAGAAAGAATGTAAGAGGCCGAGGAAAGGATGGAGTGTCGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATAGAAAGAATGTAAGAGGCCGAGGAAAGGATGGAGTGTCGTAG  200

seq1  GACACTTGTAGGGAGCCATCCCAGGCTGTAAACAGGTCAGCCGGATGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTGTAGGGAGCCATCCCAGGCTGTAAACAGGTCAGCCGGATGGAA  250

seq1  ATCTATTCCAGGCAGTAAACAAGCCCATGTTTGGTGGATGGCCCGCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTCCAGGCAGTAAACAAGCCCATGTTTGGTGGATGGCCCGCCCTT  300

seq1  AATCCCTGATTAGCTGAGCAAGCCTGCCTGGTGAGGTGATGTGACCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTGATTAGCTGAGCAAGCCTGCCTGGTGAGGTGATGTGACCTGTG  350

seq1  GTGATTGGTGGGGGCATGGTTGTGGCTGGAGAAAAACACTTGTAACTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGGTGGGGGCATGGTTGTGGCTGGAGAAAAACACTTGTAACTAGA  400

seq1  GAGGCTGGGGCATTTTAAGTAAGTAGCTGCCTGAGTAAACTGCTTTAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGGGGCATTTTAAGTAAGTAGCTGCCTGAGTAAACTGCTTTAAGA  450

seq1  AGAACCGGTGGTTGTGTTTTGCTTGCTGGTCAACTGGGACACGACAGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCGGTGGTTGTGTTTTGCTTGCTGGTCAACTGGGACACGACAGACA  500

seq1  CTAACTTGCTTGCTGGTCGAATGGGACGTGACAGACACTAACTTCCCAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACTTGCTTGCTGGTCGAATGGGACGTGACAGACACTAACTTCCCAGC  550

seq1  ACGACATCACGATGTGTCTTTTCAGGCTTAAGTTCATGGCAGCTGTGATT  600
      ||||||||||||||||||||||   |||||||||||||||||||||||| 
seq2  ACGACATCACGATGTGTCTTTTTCAGCTTAAGTTCATGGCAGCTGTGATA  600

seq1  ACCAACCTAGCTTCTTCACCAGGATATTGGG--CTTGTCGACA-TCCTGT  647
       ||||||||||||||||||||||||||||||   ||||||||| ||||||
seq2  CCCAACCTAGCTTCTTCACCAGGATATTGGGGCTTTGTCGACATTCCTGT  650

seq1  CAATAAA  654
      |||||||
seq2  CAATAAA  657