BAC Information

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BAC

Clone NameB6Ng01-207D16
Chromosome4 (Build37)
Map Location 117,447,217 - 117,602,347
singlet/doubletdoublet
Overlap genePpia-ps4_1138.1, Slc6a9, B4galt2, Atp6v0b, Dph2, Ipo13, Artn
Upstream geneTesk2, Toe1, Mutyh, Hpdl, LOC625336, LOC100041048, Zswim5, Urod, Hectd3, Eif2b3, Ptch2, 9530048O09Rik, LOC100041324, 4833401D15Rik, Plk3, Best4-ps, LOC625405, Rps8, Kif2c, Gm1661, Tmem53, 4931406I20Rik, LOC100041093, Prnpip1, Dmap1, LOC433749, Klf17
Downstream geneSt3gal3, Jmjd2a, Ptprf, Hyi, BC059842, Med8, Elovl1, Cdc20, Mpl, Tie1, LOC545675, LOC666596, 2610528J11Rik, 6330530A05Rik, 1110020C03Rik, Ebna1bp2, LOC100041290, Olfr62, Olfr1343-ps1, Olfr1342, Olfr1341, Olfr1340, Olfr1339, Olfr1338, Olfr1524-ps1, Olfr1337, Olfr219-ps1, GA_x5J8B7W3BSW-40181-41086, Olfr1335, Olfr1333, GA_x5J8B7TQTH0-2-774, Olfr1332-ps1, Olfr1331, Olfr1330, Olfr1329
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207D16.bB6Ng01-207D16.g
ACCGA026441GA026442
length793991
definitionB6Ng01-207D16.b B6Ng01-207D16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,601,557 - 117,602,347)(117,447,217 - 117,448,198)
sequence
gaattcccagtttcagcgtctcgctgcagcccgcgatctctactctgcct
cctggggtcttctccaaatgtctagcccccacctagagggacctagccta
gccagcggggaccggatccggagggtggagcggccaggtgagccctgaaa
ggtggggcggggcgggggcgctctgggccccaccccgggatctggtgacg
ccggggctggaatttgacaccggacggcggcgggcaggaggctgctgagg
gatggagttgggctcggcccccagatgcggcccgcgggctctgccagcaa
caagtccctcgggccccagccctcgctgcgactggggcttggagccctgc
acccaaggtaagccagccttcttgcccatccccttgatggacgctcaaag
ggcaggagaaagggcagaaaggtcttcctccccacttttctctcagcctc
tctcttctgggccctcagcgcagctctttgcccctcccagcccctccagt
tcttgtcgctagcttcttggactgtgttaaccctcctggctggctgtaat
gtgaggctcccgctgccgccacagggcacagaccggctgccaaggcccca
cttttaactaaaagaggcgctgccaggtgcacaactctgggcatgatcca
cttgagcttcgggggaaagcccagcactggtcccaggagaggcgcctaga
aggacacggaccaggacccctttggtgagtatagggctggtggataaggg
gttgcaagggctggaagtaccaaaaatcccaaatggtaggaaa
gaattctctctcctcttccctcagccacacaccactttgtatgtgcgtgg
atgcagaggcaagagagcagcctcacctgtcattactcaggaactatctc
cttggctggtttgagataggatcttacactgggacctaggccttgcccgg
gaagctggaccagctggcagtgggccttaggaaccttcaggttcaacctc
cctagtgctggggtctaccatgagggatgccacacacccctactttttta
cagaggtactggggaccagacttgggtcctcacgcttatgtgacaagcgc
tttacagctggaggctccccacccccaccctgtgcctgacccttgatctt
gatttccaacttccaaaactatgagggaatggctagctgcctcctcagct
gttcttcagagttcagcctagcagcctttactgactgacgatccccccac
acctcagccaccgtcaagcgtggcaaatgctttcagtctcttggctgggt
ctcagtgggcattacttgcttggtaaacctgaaactccagtgactcccag
ttccctctttctatctgggggggggggtctctgtgaccatgacagccagc
agagtaatgacccacgggaagggaaaaggcagtttggttggacatgactc
agtcgtcagtgttgggtcaaactctgggagtctgacccggagtcgtttat
tttattaatatttcaagaagagcacagtttggtgaaaactttcctggtga
tgaattatctcaatctggtgtgcacaataaagcattcagataatctctct
ttgaagaacaaaaataagctaaattaggatcagacattactgcagagaaa
ctccttgttaagttcatgtgacattcatctataaagatgggttctacccg
ggttggctggaaaaaaacaagcttatgatagggtctgggggaggggtcta
gttgtggttctgctctcagcacaaagttcattcaggttaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_117601557_117602347
seq2: B6Ng01-207D16.b_32_824 (reverse)

seq1  TTTCTTACCATTTGGGATATTTGGT-CCTCCAGCCCTTGCCACCCC-TAT  48
      |||| ||||||||||||| |||||| | |||||||||||| ||||| |||
seq2  TTTCCTACCATTTGGGATTTTTGGTACTTCCAGCCCTTGCAACCCCTTAT  50

seq1  CCACCAGCCCTATACTCACCAAAGGGGTCCTGGTCCGTGTCCTTCTAGGC  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGCCCTATACTCACCAAAGGGGTCCTGGTCCGTGTCCTTCTAGGC  100

seq1  GCCTCTCCTGGGACCAGTGCTGGGCTTTCCCCCGAAGCTCAAGTGGATCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCCTGGGACCAGTGCTGGGCTTTCCCCCGAAGCTCAAGTGGATCA  150

seq1  TGCCCAGAGTTGTGCACCTGGCAGCGCCTCTTTTAGTTAAAAGTGGGGCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCAGAGTTGTGCACCTGGCAGCGCCTCTTTTAGTTAAAAGTGGGGCC  200

seq1  TTGGCAGCCGGTCTGTGCCCTGTGGCGGCAGCGGGAGCCTCACATTACAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGCCGGTCTGTGCCCTGTGGCGGCAGCGGGAGCCTCACATTACAG  250

seq1  CCAGCCAGGAGGGTTAACACAGTCCAAGAAGCTAGCGACAAGAACTGGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAGGAGGGTTAACACAGTCCAAGAAGCTAGCGACAAGAACTGGAG  300

seq1  GGGCTGGGAGGGGCAAAGAGCTGCGCTGAGGGCCCAGAAGAGAGAGGCTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGGAGGGGCAAAGAGCTGCGCTGAGGGCCCAGAAGAGAGAGGCTG  350

seq1  AGAGAAAAGTGGGGAGGAAGACCTTTCTGCCCTTTCTCCTGCCCTTTGAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAAAGTGGGGAGGAAGACCTTTCTGCCCTTTCTCCTGCCCTTTGAG  400

seq1  CGTCCATCAAGGGGATGGGCAAGAAGGCTGGCTTACCTTGGGTGCAGGGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCATCAAGGGGATGGGCAAGAAGGCTGGCTTACCTTGGGTGCAGGGC  450

seq1  TCCAAGCCCCAGTCGCAGCGAGGGCTGGGGCCCGAGGGACTTGTTGCTGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCCCCAGTCGCAGCGAGGGCTGGGGCCCGAGGGACTTGTTGCTGG  500

seq1  CAGAGCCCGCGGGCCGCATCTGGGGGCCGAGCCCAACTCCATCCCTCAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCCGCGGGCCGCATCTGGGGGCCGAGCCCAACTCCATCCCTCAGC  550

seq1  AGCCTCCTGCCCGCCGCCGTCCGGTGTCAAATTCCAGCCCCGGCGTCACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCCTGCCCGCCGCCGTCCGGTGTCAAATTCCAGCCCCGGCGTCACC  600

seq1  AGATCCCGGGGTGGGGCCCAGAGCGCCCCCGCCCCGCCCCACCTTTCAGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCGGGGTGGGGCCCAGAGCGCCCCCGCCCCGCCCCACCTTTCAGG  650

seq1  GCTCACCTGGCCGCTCCACCCTCCGGATCCGGTCCCCGCTGGCTAGGCTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCTGGCCGCTCCACCCTCCGGATCCGGTCCCCGCTGGCTAGGCTA  700

seq1  GGTCCCTCTAGGTGGGGGCTAGACATTTGGAGAAGACCCCAGGAGGCAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCTCTAGGTGGGGGCTAGACATTTGGAGAAGACCCCAGGAGGCAGA  750

seq1  GTAGAGATCGCGGGCTGCAGCGAGACGCTGAAACTGGGAATTC  791
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGATCGCGGGCTGCAGCGAGACGCTGAAACTGGGAATTC  793

seq1: chr4_117447217_117448198
seq2: B6Ng01-207D16.g_67_1057

seq1  GAATTCTCTCTCCTCTTCCCTCAGCCACACACCACTTTGTATGTGCGTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTCCTCTTCCCTCAGCCACACACCACTTTGTATGTGCGTGG  50

seq1  ATGCAGAGGCAAGAGAGCAGCCTCACCTGTCATTACTCAGGAACTATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGGCAAGAGAGCAGCCTCACCTGTCATTACTCAGGAACTATCTC  100

seq1  CTTGGCTGGTTTGAGATAGGATCTTACACTGGGACCTAGGCCTTGCCCGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCTGGTTTGAGATAGGATCTTACACTGGGACCTAGGCCTTGCCCGG  150

seq1  GAAGCTGGACCAGCTGGCAGTGGGCCTTAGGAACCTTCAGGTTCAACCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGGACCAGCTGGCAGTGGGCCTTAGGAACCTTCAGGTTCAACCTC  200

seq1  CCTAGTGCTGGGGTCTACCATGAGGGATGCCACACACCCCTACTTTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGCTGGGGTCTACCATGAGGGATGCCACACACCCCTACTTTTTTA  250

seq1  CAGAGGTACTGGGGACCAGACTTGGGTCCTCACGCTTATGTGACAAGCGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTACTGGGGACCAGACTTGGGTCCTCACGCTTATGTGACAAGCGC  300

seq1  TTTACAGCTGGAGGCTCCCCACCCCCACCCTGTGCCTGACCCTTGATCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGCTGGAGGCTCCCCACCCCCACCCTGTGCCTGACCCTTGATCTT  350

seq1  GATTTCCAACTTCCAAAACTATGAGGGAATGGCTAGCTGCCTCCTCAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCAACTTCCAAAACTATGAGGGAATGGCTAGCTGCCTCCTCAGCT  400

seq1  GTTCTTCAGAGTTCAGCCTAGCAGCCTTTACTGACTGACGATCCCCCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCAGAGTTCAGCCTAGCAGCCTTTACTGACTGACGATCCCCCCAC  450

seq1  ACCTCAGCCACCGTCAAGCGTGGCAAATGCTTTCAGTCTCTTGGCTGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGCCACCGTCAAGCGTGGCAAATGCTTTCAGTCTCTTGGCTGGGT  500

seq1  CTCAGTGGGCATTACTTGCTTGGTAAACCTGAAACTCCAGTGACTCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGGGCATTACTTGCTTGGTAAACCTGAAACTCCAGTGACTCCCAG  550

seq1  TTCCCTCTTTCTATCTGGGGGGGGGGGTCTCTGTGACCATGACAGCCAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTTTCTATCTGGGGGGGGGGGTCTCTGTGACCATGACAGCCAGC  600

seq1  AGAGTAATGACCCACGGGAAGGGAAAAGGCAGTTTGGTTGGACATGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAATGACCCACGGGAAGGGAAAAGGCAGTTTGGTTGGACATGACTC  650

seq1  AGTCGTCAGTGTTGGGTCAAACTCTGGGAGTCTGACCCGGAGTCGTTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTCAGTGTTGGGTCAAACTCTGGGAGTCTGACCCGGAGTCGTTTAT  700

seq1  TTTATTAATA-TTCAAGAAGAGCACAGTTTGGTGAAAACTTTCCTGGTGA  749
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAATATTTCAAGAAGAGCACAGTTTGGTGAAAACTTTCCTGGTGA  750

seq1  TGAATTATCTCAATCTGGTGTGCACAATAAAGCATTCAGAAA---TCTCC  796
      |||||||||||||||||||||||||||||||||||||||| |   |||| 
seq2  TGAATTATCTCAATCTGGTGTGCACAATAAAGCATTCAGATAATCTCTCT  800

seq1  TTGAAGAAC-AAAATAAGCTAAATTAGGATCAGACATTACTGCAGAGAAA  845
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAACAAAAATAAGCTAAATTAGGATCAGACATTACTGCAGAGAAA  850

seq1  CTCCTTGTTAAGTCCATGTGACA-TCATCTATAAAGATGGGTTCTACC--  892
      ||||||||||||| ||||||||| ||||||||||||||||||||||||  
seq2  CTCCTTGTTAAGTTCATGTGACATTCATCTATAAAGATGGGTTCTACCCG  900

seq1  GGTTGGCT-GAGAAAAACAAGCTTATGATAAGGGTCTGGGGGAGGGG-CC  940
      |||||||| || ||||||||||||||||| ||||||||||||||||| | 
seq2  GGTTGGCTGGAAAAAAACAAGCTTATGAT-AGGGTCTGGGGGAGGGGTCT  949

seq1  AG-TGTGGTTTCTGCCACTCAGCACAAAAGTCA-TCAGGTTAGA  982
      || ||||| ||||| | |||||||||||  ||| ||||||||||
seq2  AGTTGTGG-TTCTG-CTCTCAGCACAAAGTTCATTCAGGTTAGA  991