BAC Information

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BAC

Clone NameB6Ng01-207G21
Chromosome17 (Build37)4 (Build37)
Map Location 70,609,341 - 70,609,383100,422,095 - 100,423,197
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEpb4.1l3, 2410021H03Rik, Zfp161, C030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535, LOC100043630
Downstream geneLOC623112, LOC623143, Dlgap1, Tgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207G21.bB6Ng01-207G21.g
ACCGA026582GA026583
length9961,107
definitionB6Ng01-207G21.b B6Ng01-207G21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(70,609,341 - 70,609,383)(100,422,095 - 100,423,197)
sequence
gaattctcacctgaggaatattgaatggctgagaagcatctgaaaaaatg
ttcagcatccttaatcatcggggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatagctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaactactctggaaataaatctggtggctcctca
gataattggacatagtactactggaggatccagcaatacctctcctgggc
atatatccagaagacgttccaactcataagaaagactcatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaattgtggtacatttacacagtg
gagtactactcagctatttaaaagaatgaatttatgaaattcctaggcaa
atggttggacctggagggcatcatcctgagtgaggtaacccaattacaaa
ggaactcacacaatatgtgctcactgataagtggatattagcccagaaac
ttagaatacccaagatatatgatacaatttgcgaaacacatgaaactcaa
gaagaacgaagaccaaagtgtgggcactttgccccttcttagaattggga
acaaaacacccatggaaggcattacagagacaaagtttggagctgagaca
aaaggatggaccatctagagactgccatatccagggatccatctcataat
cagcctccaaatgctgacaccattgcatatagtagcaagattttgctgaa
aggaccctgatatagctgtctcttgtgaggttatgccggggcctggcaaa
tacagaagtagatgctcacagtcagctattggatggatcacagggcccca
atggaggagctagagaaagtactcaaggagctaaaggatctgcaac
gaattcccctcccataagccagactcttagaaggaatttctatgtacatc
tgaatggatggtgtgaattaccagtttttgttctaaaccagaacttcttg
ggtggggtatgagttcttgtaacacatagaaagagcctactcttactctc
aaaatgtgggcaggaagacagagtggaaacttggctgttagaaaaatcaa
aagtgggcaatcaaacaggaaggacactttgtgagacagctaaataaggt
agtgccattcatcatggagtactcgaggccccctttactgtcaccaacac
attgccttcatgtcccaccattccaacttcttctgttgccctggggtcag
tattccatggcaggctctcaagttttatatcttagaatgggatgagaaaa
ctcttattttagtaactggcaacagaattccttatagaaaggagaacatc
tttcaaagacgacaataaataaaggcatggtggtgcatgcctttatccca
gctcactagaggcagaagcaggtggttctttctctatgagttcaaggcta
gcctgatttataaagagaattacagccctgccaagtctacatagaagact
caagcactgaaaatgaatcaatataaaaacaataaaatgtctcaatgtag
aggccagtcctcaagacaccagtttaagaaaagggaactcagagcacaag
ataggaacctaactgctttgtataaaatgacagatttcaggaggtgtacg
tgttctctcctaaaacacaaggagggaaaaatgaaggcgttagagactga
gaatctaccacgattaggagagtgtagaacttggtatgtggagatcatac
tacataatgctatgttttcacccaagatgctgtcaatgtctctttcctgt
gtcctcagcattgcttctgagtggagtctgagcctggctgccacactgtg
gggatagacaggatgtagaggagagcaaggagccaatgggctacggtagc
tgaaagaacatggaacttccctggggataggagaactgctggagaagctg
tggaactttcatgtggtgaaatgagctgtggactagtttatgcgagagct
tggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_70609341_70609383
seq2: B6Ng01-207G21.b_718_761 (reverse)

seq1  CCTTCCATGGGTGTTTTGTTTCCTATTCTAAG-AGGGGCAAAGT  43
      |||||||||||||||||||| || |||||||| |||||||||||
seq2  CCTTCCATGGGTGTTTTGTTCCCAATTCTAAGAAGGGGCAAAGT  44

seq1: chr4_100422095_100423197
seq2: B6Ng01-207G21.g_70_1176 (reverse)

seq1  TCCT-CAAGCTCTCG-ATAAACTTAGTCCACAGCTCATTCCACCAACAAG  48
      |||| |||||||||| |||||| |||||||||||||||| |||| ||| |
seq2  TCCTCCAAGCTCTCGCATAAAC-TAGTCCACAGCTCATTTCACC-ACATG  48

seq1  GAAG-TCCACAGCCTCTCCCAGCAG-TCTCCTAATCCCAGGGGAGTTCCA  96
       ||| |||||||| ||| ||||||| |||||||  ||||||| |||||||
seq2  AAAGTTCCACAGCTTCT-CCAGCAGTTCTCCTATCCCCAGGGAAGTTCCA  97

seq1  TGTTCTCTCAGCTACCGTGGCC--ATGGCTCCTGCTTCTCCTCTACATCC  144
      |||||| ||||||||||| |||   ||||||||   ||||||||||||||
seq2  TGTTCTTTCAGCTACCGTAGCCCATTGGCTCCTTGCTCTCCTCTACATCC  147

seq1  TGTCTAT-CCCACAGTGTGGCAGCCAGGCTCAGACTCCACTCAGAAGCAA  193
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATCCCCACAGTGTGGCAGCCAGGCTCAGACTCCACTCAGAAGCAA  197

seq1  TGCTGAGGACACAGGAAAGAGACATTGACAGCATCTTGGGTGAAAACATA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGACACAGGAAAGAGACATTGACAGCATCTTGGGTGAAAACATA  247

seq1  GCATTATGTAGTATGATCTCCACATACCAAGTTCTACACTCTCCTAATCG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTATGTAGTATGATCTCCACATACCAAGTTCTACACTCTCCTAATCG  297

seq1  TGGTAGATTCTCAGTCTCTAACGCCTTCATTTTTCCCTCCTTGTGTTTTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGATTCTCAGTCTCTAACGCCTTCATTTTTCCCTCCTTGTGTTTTA  347

seq1  GGAGAGAACACGTACACCTCCTGAAATCTGTCATTTTATACAAAGCAGTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAACACGTACACCTCCTGAAATCTGTCATTTTATACAAAGCAGTT  397

seq1  AGGTTCCTATCTTGTGCTCTGAGTTCCCTTTTCTTAAACTGGTGTCTTGA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCCTATCTTGTGCTCTGAGTTCCCTTTTCTTAAACTGGTGTCTTGA  447

seq1  GGACTGGCCTCTACATTGAGACATTTTATTGTTTTTATATTGATTCATTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGGCCTCTACATTGAGACATTTTATTGTTTTTATATTGATTCATTT  497

seq1  TCAGTGCTTGAGTCTTCTATGTAGACTTGGCAGGGCTGTAATTCTCTTTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTTGAGTCTTCTATGTAGACTTGGCAGGGCTGTAATTCTCTTTA  547

seq1  TAAATCAGGCTAGCCTTGAACTCATAGAGAAAGAACCACCTGCTTCTGCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGGCTAGCCTTGAACTCATAGAGAAAGAACCACCTGCTTCTGCC  597

seq1  TCTAGTGAGCTGGGATAAAGGCATGCACCACCATGCCTTTATTTATTGTC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTGAGCTGGGATAAAGGCATGCACCACCATGCCTTTATTTATTGTC  647

seq1  GTCTTTGAAAGATGTTCTCCTTTCTATAAGGAATTCTGTTGCCAGTTACT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTGAAAGATGTTCTCCTTTCTATAAGGAATTCTGTTGCCAGTTACT  697

seq1  AAAATAAGAGTTTTCTCATCCCATTCTAAGATATAAAACTTGAGAGCCTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGAGTTTTCTCATCCCATTCTAAGATATAAAACTTGAGAGCCTG  747

seq1  CCATGGAATACTGACCCCAGGGCAACAGAAGAAGTTGGAATGGTGGGACA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGAATACTGACCCCAGGGCAACAGAAGAAGTTGGAATGGTGGGACA  797

seq1  TGAAGGCAATGTGTTGGTGACAGTAAAGGGGGCCTCGAGTACTCCATGAT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCAATGTGTTGGTGACAGTAAAGGGGGCCTCGAGTACTCCATGAT  847

seq1  GAATGGCACTACCTTATTTAGCTGTCTCACAAAGTGTCCTTCCTGTTTGA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCACTACCTTATTTAGCTGTCTCACAAAGTGTCCTTCCTGTTTGA  897

seq1  TTGCCCACTTTTGATTTTTCTAACAGCCAAGTTTCCACTCTGTCTTCCTG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCACTTTTGATTTTTCTAACAGCCAAGTTTCCACTCTGTCTTCCTG  947

seq1  CCCACATTTTGAGAGTAAGAGTAGGCTCTTTCTATGTGTTACAAGAACTC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATTTTGAGAGTAAGAGTAGGCTCTTTCTATGTGTTACAAGAACTC  997

seq1  ATACCCCACCCAAGAAGTTCTGGTTTAGAACAAAAACTGGTAATTCACAC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCCACCCAAGAAGTTCTGGTTTAGAACAAAAACTGGTAATTCACAC  1047

seq1  CATCCATTCAGATGTACATAGAAATTCCTTCTAAGAGTCTGGCTTATGGG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTCAGATGTACATAGAAATTCCTTCTAAGAGTCTGGCTTATGGG  1097

seq1  AGGGGAATTC  1103
      ||||||||||
seq2  AGGGGAATTC  1107