BAC Information

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BAC

Clone NameB6Ng01-208N14
Chromosome4 (Build37)
Map Location 147,683,595 - 147,827,897
singlet/doubletdoublet
Overlap geneUbiad1, Frap1
Upstream geneLOC666581, EG666588, LOC627701, OTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2
Downstream geneAngptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742, LOC100041755, Casz1, Pex14, LOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd, Kif1b, LOC100041794, Ube4b, Rbp7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-208N14.bB6Ng01-208N14.g
ACCGA027619GA027620
length991231
definitionB6Ng01-208N14.b B6Ng01-208N14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,826,914 - 147,827,897)(147,683,595 - 147,683,825)
sequence
gaattcccaccttccactcctatgaggctggctagaaaagaaagcaaaga
tgaccatgtgggtggtgtgttctggaatgcatatgctgaaccctgggaga
gaccttactccgctctcagtatatttctatatggaagacagcagtttttc
atttgaaccagcagtttggatttttgttctggaactatgtacgtaaatca
aaatgacctcatcttaacacatctgtgtatctcattcttaagactgagtg
acaattcacagtacttgtggccagctcttgggcaaatagcacgcatttct
acttgtgtatctatgagccccactgtgccaaatcctgctctactgtggtc
agacccaccagggccacctagggcagaagaatgaaaagctggcttttagt
ctcacccttggcaaactggccacagaagtcaccagttctgagactcagct
gtcagtgagttttgcccgagtcccaggacttttgctagaattagcactcg
tctatgtgcagcctgtctacgggtgccttaaaattcttttaaactacaga
tgaagtagataccactactcctttagcaagtgcagacagagtacagtgag
caccaagttgagttgtccagtgtccctaacagttgttgctaccagaggct
gtccttaccgatggccaagatgccacccttcctctcattggcatctgagc
tggaaaccagttcaaaaatgtgatggttcagctggtcatagaagcgagta
gactcctcctgactcatctgcaaggaagatgtgcacagaacagatttgtg
tatttgcaccactggtaaggcagtagcgagctggcaacttgagattcaga
tggagaggtggcaggcacagttcaaccaaagacaggctcatgcccatttt
ccacagctttaaagcgaagagcaactgatcacaatgacttccttgtttat
tttaacaactgctttactgattctcttacgaatgagcagag
catctctagaccccaatttctgtgacacagggaacacacacagcctcttc
agcggggctgctgtaagaattaagtaaggtaatgtgcctgaagcattgag
caggctggcggtgtcatttatctgaggaggcagaatggttacttgcctgg
gtgtctgggagggaaccggttgctcctctacccccacagacggggagtgg
aggagagagggagaggcatgggaggagaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147826914_147827897
seq2: B6Ng01-208N14.b_47_1037 (reverse)

seq1  CTCTGCT--ATCGT-AGAGAATCAGT-AAGCAGTTGTT-AAATAAACA--  43
      |||||||   |||| ||||||||||| ||||||||||| |||||||||  
seq2  CTCTGCTCATTCGTAAGAGAATCAGTAAAGCAGTTGTTAAAATAAACAAG  50

seq1  GGAGTCA-TGTGATCAGTTGCTCTTCGCTTTAAAGCTGTGG-AAATGGGC  91
      | ||||| ||||||||||||||||||||||||||||||||| ||||||||
seq2  GAAGTCATTGTGATCAGTTGCTCTTCGCTTTAAAGCTGTGGAAAATGGGC  100

seq1  ATGAGCCTTGTCTTTGGTTTGAACTGTGCCTGCCACCTCTCCATCTGAAT  141
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  ATGAGCC-TGTCTTTGG-TTGAACTGTGCCTGCCACCTCTCCATCTGAAT  148

seq1  CTCAAGTTGCCAGCTCGCTACTGCCTTACCAGTGGTGCAAATACACAAAT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTTGCCAGCTCGCTACTGCCTTACCAGTGGTGCAAATACACAAAT  198

seq1  CTGTTCTGTGCACATCTTCCTTGCAGATGAGTCAGGAGGAGTCTACTCGC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCTGTGCACATCTTCCTTGCAGATGAGTCAGGAGGAGTCTACTCGC  248

seq1  TTCTATGACCAGCTGAACCATCACATTTTTGAACTGGTTTCCAGCTCAGA  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGACCAGCTGAACCATCACATTTTTGAACTGGTTTCCAGCTCAGA  298

seq1  TGCCAATGAGAGGAAGGGTGGCATCTTGGCCATCGGTAAGGACAGCCTCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAATGAGAGGAAGGGTGGCATCTTGGCCATCGGTAAGGACAGCCTCT  348

seq1  GGTAGCAACAACTGTTAGGGACACTGGACAACTCAACTTGGTGCTCACTG  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGCAACAACTGTTAGGGACACTGGACAACTCAACTTGGTGCTCACTG  398

seq1  TACTCTGTCTGCACTTGCTAAAGGAGTAGTGGTATCTACTTCATCTGTAG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGTCTGCACTTGCTAAAGGAGTAGTGGTATCTACTTCATCTGTAG  448

seq1  TTTAAAAGAATTTTAAGGCACCCGTAGACAGGCTGCACATAGACGAGTGC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGAATTTTAAGGCACCCGTAGACAGGCTGCACATAGACGAGTGC  498

seq1  TAATTCTAGCAAAAGTCCTGGGACTCGGGCAAAACTCACTGACAGCTGAG  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCTAGCAAAAGTCCTGGGACTCGGGCAAAACTCACTGACAGCTGAG  548

seq1  TCTCAGAACTGGTGACTTCTGTGGCCAGTTTGCCAAGGGTGAGACTAAAA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAACTGGTGACTTCTGTGGCCAGTTTGCCAAGGGTGAGACTAAAA  598

seq1  GCCAGCTTTTCATTCTTCTGCCCTAGGTGGCCCTGGTGGGTCTGACCACA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTTTTCATTCTTCTGCCCTAGGTGGCCCTGGTGGGTCTGACCACA  648

seq1  GTAGAGCAGGATTTGGCACAGTGGGGCTCATAGATACACAAGTAGAAATG  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGCAGGATTTGGCACAGTGGGGCTCATAGATACACAAGTAGAAATG  698

seq1  CGTGCTATTTGCCCAAGAGCTGGCCACAAGTACTGTGAATTGTCACTCAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGCTATTTGCCCAAGAGCTGGCCACAAGTACTGTGAATTGTCACTCAG  748

seq1  TCTTAAGAATGAGATACACAGATGTGTTAAGATGAGGTCATTTTGATTTA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGAATGAGATACACAGATGTGTTAAGATGAGGTCATTTTGATTTA  798

seq1  CGTACATAGTTCCAGAACAAAAATCCAAACTGCTGGTTCAAATGAAAAAC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACATAGTTCCAGAACAAAAATCCAAACTGCTGGTTCAAATGAAAAAC  848

seq1  TGCTGTCTTCCATATAGAAATATACTGAGAGCGGAGTAAGGTCTCTCCCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCTTCCATATAGAAATATACTGAGAGCGGAGTAAGGTCTCTCCCA  898

seq1  GGGTTCAGCATATGCATTCCAGAACACACCACCCACATGGTCATCTTTGC  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTCAGCATATGCATTCCAGAACACACCACCCACATGGTCATCTTTGC  948

seq1  TTTCTTTTCTAGCCAGCCTCATAGGAGTGGAAGGTGGGAATTC  984
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTCTAGCCAGCCTCATAGGAGTGGAAGGTGGGAATTC  991

seq1: chr4_147683595_147683825
seq2: B6Ng01-208N14.g_70_300

seq1  CATCTCTAGACCCCAATTTCTGTGACACAGGGAACACACACAGCCTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTAGACCCCAATTTCTGTGACACAGGGAACACACACAGCCTCTTC  50

seq1  AGCGGGGCTGCTGTAAGAATTAAGTAAGGTAATGTGCCTGAAGCATTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGGGCTGCTGTAAGAATTAAGTAAGGTAATGTGCCTGAAGCATTGAG  100

seq1  CAGGCTGGCGGTGTCATTTATCTGAGGAGGCAGAATGGTTACTTGCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTGGCGGTGTCATTTATCTGAGGAGGCAGAATGGTTACTTGCCTGG  150

seq1  GTGTCTGGGAGGGAACCGGTTGCTCCTCTACCCCCACAGACGGGGAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGGGAGGGAACCGGTTGCTCCTCTACCCCCACAGACGGGGAGTGG  200

seq1  AGGAGAGAGGGAGAGGCATGGGAGGAGAGGT  231
      |||||||||||||||||||||||||||||||
seq2  AGGAGAGAGGGAGAGGCATGGGAGGAGAGGT  231