BAC Information

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BAC

Clone NameB6Ng01-214B08
Chromosome4 (Build37)
Map Location 75,284,498 - 75,285,524
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039814, LOC636847, 3110001D03Rik, LOC623529, LOC100039833
Downstream geneLOC100039884, LOC667845, Ptprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214B08.bB6Ng01-214B08.g
ACCGA031430GA031431
length1,0241,207
definitionB6Ng01-214B08.b B6Ng01-214B08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgtgattattttagaattatattaagagaagagagaggatc
taacaaaaccttaaagaaagtagccttatcatacactcagcaatagccag
aacaatagcaataaattatcttttctttcttattcacttatacgtttgtc
aaactacatactccagtggctagaagaccacttcagatctactttcttcc
ttcagtttaaccttcagcaagtcatttgacaaaaaacaaaacaaaacaaa
acaaaacaaaaataaccaaacaacagaaaaaaaaaacaaaaaacaaaaac
ctgagacctcagattttttttgttagatttaagataaaactgatacctaa
aaatgatacagatgatatggaaaaaaatcataaaattcccatatatattc
agcatactagaagatttcacagtaattgctcagtaaatatatggactttt
caggatagactggcaattacttaataaagcatcttctattataagttcag
tgctgtgctaaacatccagggtataattgtgggtgtgatcaattattgtt
attttctgtttcaggaggactttaggactttagcaagcatggagtcatct
tatgatagtgacaccaggccccaagataagatgaaaaacatggggctgat
ccttttgattctacaagagtcaaggcgaaagtctctaaatgaaggtagaa
tgttccccaaaccattttgaaatgggaattagtgcctattttccttaact
actagctatctcttttttctatcaagtttctttcttcttgtacttctaca
atacctggtgcttttctcattgtgacagagagagtttctattcttgttta
ggtcccaggactttgaggtcaagagtttattcttgctatggtttcattcc
caaggccatacactattagatgcctcatttaaaaattgtgtactcagaga
ttgagaaataaataaaggaataaagcagaaagaaaggagacatagaggat
gagaggagagagagggagagagag

gaattctcacctgaggaataccgaatggctgagaatcaactaaaataatg
ttaaacattttctgcagactggacttaattagttcttctacccacgggaa
accagggttccaatatacaggtgaacaaggagttggcaaaaagtgacaaa
cagacactgacacagagagtgctgtatttgaaagtaatttctcaaagcaa
gcatcatattacagaagcgagacttatattgcagaagaagacaaggaagt
taaatgatacattaatgtcatccaaggcacattgagcttacccgatgcaa
aaggactcgttacacaaaatggaggaatacattacattaaagctaacagg
aaccagtcagtgtttacaactgggataaaaatcactgttaacaactggga
tcaaaagacgccccacctaaggtcagcttattcttagaagccaggggcaa
gggcttcatgcccttgccatagttccagttctagtctattgtataatcca
ttttcactgtcttagggttttattgctatgaacagacaccatgactaagg
caagtcttataaaaaaacaaaacaaaacatttaattggggttagcttaca
gattcagaggtgtagtccattatcatcaaggtgggagcatggcagtatcc
aggcaggcatggtgcaggcagagctgagagttctaagagttctacatctt
catccaaaggctgctggtggaagactgacttccgtgcaactatggtgagg
gtcttaagcccacacccatagtgacacacctacttcaagcaggtcgcacc
tattcaacaaggccacacctccaaatcgtgccactccctggtccaagaat
atacaaaccatgacattcgccttagtcgttgtaaattactctgtatgaga
gtgactcagcaattgttctaagtatttactctagttccttcttagaccac
aacctttccttcttcctaggccattgtaaattcctgtgtatgggagtgac
tcagctgttctaagtatactttgtagactagccctgagacttctagctct
atcagtaaattgtaatgcctgctttctacactgcctttatgtcaatactg
gagggtttccgtctggaattgattagcattcttacaaattcaggccagtg
gctcacgactcctaggaattggaaccctggtgtgagccttaaccttacaa
cttctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_75284498_75285524
seq2: B6Ng01-214B08.b_50_1073 (reverse)

seq1  CTCTCTCTCCCTCTCTCTCCTCTCATCCTCTATGTCTCCTTTCTTTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCTCTCTCCCTCTCTCTCCTCTCATCCTCTATGTCTCCTTTCTTTC-TG  49

seq1  CTTTATTCCTTTATTTATTTTCTTCATTCTCTGAGTACACAATTTTTAAA  100
      ||||||||||||||||||||   ||| |||||||||||||||||||||||
seq2  CTTTATTCCTTTATTTATTT--CTCAATCTCTGAGTACACAATTTTTAAA  97

seq1  TGAGGCATCTAATAGTGTATGGCCTTGGGAATGAAACCATAGCAAGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCATCTAATAGTGTATGGCCTTGGGAATGAAACCATAGCAAGAATA  147

seq1  AACTCTTGACCTCAAAGTCCTGGGACCTAAACAAGAATAGAAACTCTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGACCTCAAAGTCCTGGGACCTAAACAAGAATAGAAACTCTCTC  197

seq1  TGTCACAATGAGAAAAGCACCAGGTATTGTAGAAGTACAAGAAGAAAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAATGAGAAAAGCACCAGGTATTGTAGAAGTACAAGAAGAAAGAA  247

seq1  ACTTGATAGAAAAAAGAGATAGCTAGTAGTTAAGGAAAATAGGCACTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATAGAAAAAAGAGATAGCTAGTAGTTAAGGAAAATAGGCACTAAT  297

seq1  TCCCATTTCAAAATGGTTTGGGGAACATTCTACCTTCATTTAGAGACTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTCAAAATGGTTTGGGGAACATTCTACCTTCATTTAGAGACTTT  347

seq1  CGCCTTGACTCTTGTAGAATCAAAAGGATCAGCCCCATGTTTTTCATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTGACTCTTGTAGAATCAAAAGGATCAGCCCCATGTTTTTCATCTT  397

seq1  ATCTTGGGGCCTGGTGTCACTATCATAAGATGACTCCATGCTTGCTAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGGGGCCTGGTGTCACTATCATAAGATGACTCCATGCTTGCTAAAG  447

seq1  TCCTAAAGTCCTCCTGAAACAGAAAATAACAATAATTGATCACACCCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAAGTCCTCCTGAAACAGAAAATAACAATAATTGATCACACCCACA  497

seq1  ATTATACCCTGGATGTTTAGCACAGCACTGAACTTATAATAGAAGATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACCCTGGATGTTTAGCACAGCACTGAACTTATAATAGAAGATGCT  547

seq1  TTATTAAGTAATTGCCAGTCTATCCTGAAAAGTCCATATATTTACTGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAGTAATTGCCAGTCTATCCTGAAAAGTCCATATATTTACTGAGC  597

seq1  AATTACTGTGAAATCTTCTAGTATGCTGAATATATATGGGAATTTTATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTGTGAAATCTTCTAGTATGCTGAATATATATGGGAATTTTATGA  647

seq1  TTTTTTTCCATATCATCTGTATCATTTTTAGGTATCAGTTTTATCTTAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTCCATATCATCTGTATCATTTTTAGGTATCAGTTTTATCTTAAA  697

seq1  TCTAACAAAAAAAATCTGAGGTCTCAGGTTTTTGTTTTTTGTTTTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACAAAAAAAATCTGAGGTCTCAGGTTTTTGTTTTTTGTTTTTTTTT  747

seq1  TCTGTTGTTTGGTTATTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGTTTGGTTATTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTGTC  797

seq1  AAATGACTTGCTGAAGGTTAAACTGAAGGAAGAAAGTAGATCTGAAGTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGACTTGCTGAAGGTTAAACTGAAGGAAGAAAGTAGATCTGAAGTGG  847

seq1  TCTTCTAGCCACTGGAGTATGTAGTTTGACAAACGTATAAGTGAATAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAGCCACTGGAGTATGTAGTTTGACAAACGTATAAGTGAATAAGA  897

seq1  AAGAAAAGATAATTTATTGCTATTGTTCTGGCTATTGCTGAGTGTATGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAGATAATTTATTGCTATTGTTCTGGCTATTGCTGAGTGTATGAT  947

seq1  AAGGCTACTTTCTTTAAGGTTTTGTTAGATCCTCTCTCTTCTCTTAATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTACTTTCTTTAAGGTTTTGTTAGATCCTCTCTCTTCTCTTAATAT  997

seq1  AATTCTAAAATAATCACATAAGAATTC  1027
      |||||||||||||||||||||||||||
seq2  AATTCTAAAATAATCACATAAGAATTC  1024


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