BAC Information

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BAC

Clone NameB6Ng01-215M12
Chromosome4 (Build37)
Map Location 12,336,371 - 12,337,534
singlet/doubletsinglet
Overlap genenone
Upstream gene1110037F02Rik, LOC100039847, E130016E03Rik, LOC100039862, Gem, Cdh17, Ppm2c, Tmem67, C430048L16Rik, LOC230010, LOC623671, LOC100039958, Rbm12b, 6720467C03Rik, LOC545592
Downstream geneOTTMUSG00000004461
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215M12.bB6Ng01-215M12.g
ACCGA032649GA032650
length1,163987
definitionB6Ng01-215M12.b B6Ng01-215M12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtaaataataatgttcattatgcaacattgcaccatctaacat
aaagccccgagtctcaacattttctccaaatatgtgatttacatgttata
tatgttttgccttcatgtatgtgtttctacacacacacgcacacacacac
atacacacatatacatatacactcatatatatatgtatatatactgtgca
tgtctggtgtctataaaagttagaagaggacatgggattcactagattta
ggaatggctgagaactgctgtgcacttgcctgaactggcccaagtctttc
caaggtctttcatagaactttttgagattaaaatatagtttcagcatttc
tcccttccctttttccttccaaaccttctcatatactgcttaccattctc
cttcaatttacagcctctctttcagtaattgttatgcatccatgtatgta
tatgcatatagagccctaaatataccctgtttagtctacataatgtcact
tctgtgtatgttatgcttagccatctctccatatctcctacccccatata
tttcaaataatgattccactttagccttttttttttggatactttagaat
ctctagagacactttatgactcaaagatacataggacactaaataaaata
agtagaaaaaaatgttaaaagacagggtcgtggtatacatccagagaaat
agaataaaacagagtgaagcatatctgagcaaatattaacacaatccttt
ccccttccttctaccagtgtggttcaaatcatcatttaccttgtctcctt
agtgtgtgctgactattctccttccctatcttgttacagagaagccaaat
ttattgatagtgcacaaatgttcttttcaatgaacaatttcaatattctt
cccaaattatcagtgtctagtacaaccactggaaatgaatctgtcctgaa
cttcatgaggatcaccctcagtgactggaatcagcaaaccttcatcaact
gtcatcagctctggatccttcagaaggggtgctgctggtatacacatgtt
aaagtttgatgtctccaaattatttatgaaccaagatctacatgattctg
tcatgattgtaaaaataatcttcaattcccttgagacaatgggggtcatg
ctcagaaaatatt
gaattctttgtttagctctataccccccccccttttttttgagacagggt
ttctctgtatagccttggctgtcctggaactcactttttagaccagactg
gcctcgaacgcagaaatctgccttcctctgcctcccgagagctgggatta
aaggcatgtgccaccacgcctggcttgtaccccattttttaatagggtta
tttgaatttctggagttcagcttcttgagctctttgtatgtattggttat
tagtcccctatcagatttaggattggtaaaaatcctttcccaatctgttg
gtggcctttttgccttattgacagtgtcttttgccttacagaagctttgc
aattttatgaggtcccatttgtcaattcttgatcctacagcacaagccat
tgctgttctgtttaggaatttttcccctgtgcccatatctttgaggcttt
cccccactttctcctatattaatttcagtgtctctggttttatgtggagg
tctttgatccacttagacttgagctttgtgcaagaagataagaatggttc
aatgcgcattcttttacatgataaccgccagtgtgccagcaccatttgtt
gaaaatgctgtctgttttccactggatggttttagctcccttgtcaaaga
tcaagtgaccataggtgtgtggattcatttctgggtcttcaattctattc
cattggtctacttgtctgttgctataccagtaccatgcagtttttatcat
aattgctctgtagtacagcataatgtcaggcatggtgattccaccagagg
ttcttctattgtttgagaatagtttttgctatcctagtttttgttttgtt
ttattattccagatgatttgccaactgccctttctatctcagtgaagaat
tgagttgggaatttgatggggattgccttgaatctgagatgctttcatca
ggatagcattcactattttaatcttggcaaccatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_12336371_12337534
seq2: B6Ng01-215M12.b_46_1208 (reverse)

seq1  AATA-TTTCTGAGCATGACTCCCCATG-CTC-AGAGAATGGAGAATTATT  47
      |||| |||||||||||||| |||  || ||| || |||| ||  |||| |
seq2  AATATTTTCTGAGCATGACCCCCATTGTCTCAAGGGAATTGAAGATTA-T  49

seq1  TTTTACAATCATGACAGCATCATTGTAGATCTTGTTTCATAAATAATTTT  97
      ||||||||||||||||| |||| ||||||||||| |||||||||||||| 
seq2  TTTTACAATCATGACAGAATCA-TGTAGATCTTGGTTCATAAATAATTTG  98

seq1  GAGACATCAAACTTTAACATGTGTATACCAGCAGCACCCCCTCTGGAGGA  147
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  GAGACATCAAACTTTAACATGTGTATACCAGCAGCACCCCTTCTGAAGGA  148

seq1  TCCAGAGCTGATGACAGGTTGATGAAGGTCTGCTGATTCCAGTCACTGAG  197
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  TCCAGAGCTGATGACA-GTTGATGAAGGTTTGCTGATTCCAGTCACTGAG  197

seq1  GGTGATCCTCATGGAAGTTCAGGACAGATTCATTTCCAGTGGTTGTACTA  247
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGTGATCCTCAT-GAAGTTCAGGACAGATTCATTTCCAGTGGTTGTACTA  246

seq1  GACACTGATAATTTGGGAAGAATATTGAAATTGTTCATTGAAAAGAACAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTGATAATTTGGGAAGAATATTGAAATTGTTCATTGAAAAGAACAT  296

seq1  TTGTGCACTATCAATAAATTTGGCTTCTCTGTAACAAGATAGGGAAGGAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCACTATCAATAAATTTGGCTTCTCTGTAACAAGATAGGGAAGGAG  346

seq1  AATAGTCAGCACACACTAAGGAGACAAGGTAAATGATGATTTGAACCACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTCAGCACACACTAAGGAGACAAGGTAAATGATGATTTGAACCACA  396

seq1  CTGGTAGAAGGAAGGGGAAAGGATTGTGTTAATATTTGCTCAGATATGCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTAGAAGGAAGGGGAAAGGATTGTGTTAATATTTGCTCAGATATGCT  446

seq1  TCACTCTGTTTTATTCTATTTCTCTGGATGTATACCACGACCCTGTCTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGTTTTATTCTATTTCTCTGGATGTATACCACGACCCTGTCTTT  496

seq1  TAACATTTTTTTCTACTTATTTTATTTAGTGTCCTATGTATCTTTGAGTC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTTTTTCTACTTATTTTATTTAGTGTCCTATGTATCTTTGAGTC  546

seq1  ATAAAGTGTCTCTAGAGATTCTAAAGTATCCAAAAAAAAAAGGCTAAAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTGTCTCTAGAGATTCTAAAGTATCCAAAAAAAAAAGGCTAAAGT  596

seq1  GGAATCATTATTTGAAATATATGGGGGTAGGAGATATGGAGAGATGGCTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCATTATTTGAAATATATGGGGGTAGGAGATATGGAGAGATGGCTA  646

seq1  AGCATAACATACACAGAAGTGACATTATGTAGACTAAACAGGGTATATTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAACATACACAGAAGTGACATTATGTAGACTAAACAGGGTATATTT  696

seq1  AGGGCTCTATATGCATATACATACATGGATGCATAACAATTACTGAAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTCTATATGCATATACATACATGGATGCATAACAATTACTGAAAGA  746

seq1  GAGGCTGTAAATTGAAGGAGAATGGTAAGCAGTATATGAGAAGGTTTGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTGTAAATTGAAGGAGAATGGTAAGCAGTATATGAGAAGGTTTGGA  796

seq1  AGGAAAAAGGGAAGGGAGAAATGCTGAAACTATATTTTAATCTCAAAAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAAGGGAAGGGAGAAATGCTGAAACTATATTTTAATCTCAAAAAG  846

seq1  TTCTATGAAAGACCTTGGAAAGACTTGGGCCAGTTCAGGCAAGTGCACAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGAAAGACCTTGGAAAGACTTGGGCCAGTTCAGGCAAGTGCACAG  896

seq1  CAGTTCTCAGCCATTCCTAAATCTAGTGAATCCCATGTCCTCTTCTAACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTCAGCCATTCCTAAATCTAGTGAATCCCATGTCCTCTTCTAACT  946

seq1  TTTATAGACACCAGACATGCACAGTATATATACATATATATATGAGTGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGACACCAGACATGCACAGTATATATACATATATATATGAGTGTA  996

seq1  TATGTATATGTGTGTATGTGTGTGTGTGCGTGTGTGTGTAGAAACACATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATATGTGTGTATGTGTGTGTGTGCGTGTGTGTGTAGAAACACATA  1046

seq1  CATGAAGGCAAAACATATATAACATGTAAATCACATATTTGGAGAAAATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGGCAAAACATATATAACATGTAAATCACATATTTGGAGAAAATG  1096

seq1  TTGAGACTCGGGGCTTTATGTTAGATGGTGCAATGTTGCATAATGAACAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACTCGGGGCTTTATGTTAGATGGTGCAATGTTGCATAATGAACAT  1146

seq1  TATTATTTACAGAATTC  1164
      |||||||||||||||||
seq2  TATTATTTACAGAATTC  1163