BAC Information

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BAC

Clone NameB6Ng01-218B24
Chromosome4 (Build37)
Map Location 16,795,247 - 16,796,335
singlet/doubletsinglet
Overlap genenone
Upstream geneCalb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173, Mmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218B24.bB6Ng01-218B24.g
ACCGA034337GA034338
length1,1621,079
definitionB6Ng01-218B24.b B6Ng01-218B24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgagaaataccgaatggctgagaagcacctgaaaaactg
ttcagtaatctcaatcatcagggaaatgtaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggagaggatggggagaaagaggaaaacccttccattgttggtg
tgattgcaagcttgtacaaccactctggaagtcagtctggtggttcctca
gaaaattggacatggtactactagcggatcctgcaatacctctcctggac
atatatccagaagttgttctaactaggaaggtaagaaacttgctccacta
tgttcatagcagccttctttataatagccagtacctggaaagaacctaga
tgcccctcaacagaggaatggatacaaaaaaaatgtggtacatttacaca
atggagtaccactctgctattaaaaagaatgaattaatgaaattcctagg
caaatgtttggacctggagggccttatcctgagtgtggtaacccaatcac
aaaaaacctcaaatgatatggactcactgataagtggatattagcccaga
aacttagaatacccatgatataagttacaattttcaaaacacatgaaact
caagaagaacgaagaccaaagtgtggacactttgacccttcctagaattg
ggaacaaaacacccatggaaggagttaaagagacaaagtttggagctgag
acaaaaggatggaccatctggagactgtcatatccagggatccatctcat
aatcagcctccaaacacttataccatttcatatactagcaagattttgct
gaaaggaccctgatatagctgtcttttgtgaaactatgctggggtcttgc
aacacataaatggatgctcacagtcagctattggatggatcacagggccc
caatggaggatctagagaagtacccaaggagctaaagggatcttgcacct
tatagtggatcacattatgaactagcagtaccccggatctctgactctag
ctgcatattgtagcagaaaatgtcctagtcgcatcactgaagagagttcc
atgatcttgccaacttaattgccccagttacaaggaaacgctagggccca
aatatgctgtgg
gaattcttatctgatattgtgctactggaaagttcaaaactactatggca
atatttcaaataaagagaatattcaaagctatacaatttgataaggtagt
gtgaaaatgaagctagaattgagaagtaaggaatgaaatatgaatgatta
aagtactgagaagagagtatgagaatcagaaaagacagaccaagtggtat
atttgggaaaaaataaggtgaatttgaagaaattaggccaaaacatacca
aaagataaaagtaataactatgttaagaaacaaaagaatagactcaaaaa
tagtaaaacagcatgttttctctgataaatgatgctaatggaacttagat
ttaaaattattcacgtaaaattattcaagatagaaaaatgagtttaagtc
aaaccctgaaaggttcatattcagagaataagagagccatgataaataaa
ataaatatattgtaggctggaagaaatatcaagattctaaaagccgagac
aaaaggaaataatgagaagaaaatggttaattgagtcaaatattgataga
tggagaatagctgtcaaataaacccatgggcttaattgaaaaatgatcaa
tgaccctaaaataaaagttttcatagtgtccggggcaagacatcagagga
tgagctgagggagaaaatgaaatgactgaggacatacagtgactacagtc
actccttcaagaaggtttatttgtagagataagaaatttgaggaaaaagt
ggatattaaatcagggttttgtatatcacctagtccatatataaccaaga
agtcatttccaatttatactggcttgaaaagaaaagagcaattttctcca
gtaaaatgacactgggtgtaggatccatgtattaggacaggtttcatgat
caagtgttattatccaatacacaatatagtgaatgagttatatatgactt
cctctgtaatgtaaagaacgaagtgagttggtacattagtgtggggagat
tctggcgacttggagagaggaaatgtgctctaacaccagtatgaattttt
ttttccaaaaaagagcacatggttaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16795247_16796335
seq2: B6Ng01-218B24.g_64_1142 (reverse)

seq1  ATGTTAA-CATGTGCCTCTCTTTTTGAAAAAAAAAAATCATACTGTGTTT  49
      ||||||| |||||| |||| |||||| ||||||||| ||||||||   ||
seq2  ATGTTAACCATGTG-CTCT-TTTTTGGAAAAAAAAATTCATACTGGTGTT  48

seq1  TGAGCACATTTTCCTCTCCTCCAAGTCCTTCCAGATTCTCCCCAACACCT  99
       ||||||| |||||||| |||||||||   ||||| ||||||| ||||  
seq2  AGAGCACA-TTTCCTCT-CTCCAAGTC--GCCAGAATCTCCCC-ACAC--  91

seq1  TAATGTACCAACTTCACCTTCGTTCTTTACATTACAGAGGAAGTCATATA  149
      |||||||||||| ||| |||||||||||||||||||||||||||||||||
seq2  TAATGTACCAAC-TCA-CTTCGTTCTTTACATTACAGAGGAAGTCATATA  139

seq1  TAACTCATTCACTATATTGTGTATTGGATAATAACACTTGATCATGAAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCATTCACTATATTGTGTATTGGATAATAACACTTGATCATGAAAC  189

seq1  CTGTCCTAATACATGGATCCTACACCCAGTGTCATTTTACTGGAGAAAAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTAATACATGGATCCTACACCCAGTGTCATTTTACTGGAGAAAAT  239

seq1  TGCTCTTTTCTTTTCAAGCCAGTATAAATTGGAAATGACTTCTTGGTTAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTTCTTTTCAAGCCAGTATAAATTGGAAATGACTTCTTGGTTAT  289

seq1  ATATGGACTAGGTGATATACAAAACCCTGATTTAATATCCACTTTTTCCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGACTAGGTGATATACAAAACCCTGATTTAATATCCACTTTTTCCT  339

seq1  CAAATTTCTTATCTCTACAAATAAACCTTCTTGAAGGAGTGACTGTAGTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTTCTTATCTCTACAAATAAACCTTCTTGAAGGAGTGACTGTAGTC  389

seq1  ACTGTATGTCCTCAGTCATTTCATTTTCTCCCTCAGCTCATCCTCTGATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTATGTCCTCAGTCATTTCATTTTCTCCCTCAGCTCATCCTCTGATG  439

seq1  TCTTGCCCCGGACACTATGAAAACTTTTATTTTAGGGTCATTGATCATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCCCGGACACTATGAAAACTTTTATTTTAGGGTCATTGATCATTT  489

seq1  TTCAATTAAGCCCATGGGTTTATTTGACAGCTATTCTCCATCTATCAATA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTAAGCCCATGGGTTTATTTGACAGCTATTCTCCATCTATCAATA  539

seq1  TTTGACTCAATTAACCATTTTCTTCTCATTATTTCCTTTTGTCTCGGCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTCAATTAACCATTTTCTTCTCATTATTTCCTTTTGTCTCGGCTT  589

seq1  TTAGAATCTTGATATTTCTTCCAGCCTACAATATATTTATTTTATTTATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATCTTGATATTTCTTCCAGCCTACAATATATTTATTTTATTTATC  639

seq1  ATGGCTCTCTTATTCTCTGAATATGAACCTTTCAGGGTTTGACTTAAACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTCTTATTCTCTGAATATGAACCTTTCAGGGTTTGACTTAAACT  689

seq1  CATTTTTCTATCTTGAATAATTTTACGTGAATAATTTTAAATCTAAGTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCTATCTTGAATAATTTTACGTGAATAATTTTAAATCTAAGTTC  739

seq1  CATTAGCATCATTTATCAGAGAAAACATGCTGTTTTACTATTTTTGAGTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGCATCATTTATCAGAGAAAACATGCTGTTTTACTATTTTTGAGTC  789

seq1  TATTCTTTTGTTTCTTAACATAGTTATTACTTTTATCTTTTGGTATGTTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTGTTTCTTAACATAGTTATTACTTTTATCTTTTGGTATGTTT  839

seq1  TGGCCTAATTTCTTCAAATTCACCTTATTTTTTCCCAAATATACCACTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTAATTTCTTCAAATTCACCTTATTTTTTCCCAAATATACCACTTG  889

seq1  GTCTGTCTTTTCTGATTCTCATACTCTCTTCTCAGTACTTTAATCATTCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTTTTCTGATTCTCATACTCTCTTCTCAGTACTTTAATCATTCA  939

seq1  TATTTCATTCCTTACTTCTCAATTCTAGCTTCATTTTCACACTACCTTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCATTCCTTACTTCTCAATTCTAGCTTCATTTTCACACTACCTTAT  989

seq1  CAAATTGTATAGCTTTGAATATTCTCTTTATTTGAAATATTGCCATAGTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTGTATAGCTTTGAATATTCTCTTTATTTGAAATATTGCCATAGTA  1039

seq1  GTTTTGAACTTTCCAGTAGCACAATATCAGATAAGAATTC  1089
      ||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAACTTTCCAGTAGCACAATATCAGATAAGAATTC  1079