BAC Information

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BAC

Clone NameB6Ng01-219N09
Chromosome4 (Build37)
Map Location 16,756,308 - 16,757,441
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC633695, Calb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219N09.bB6Ng01-219N09.g
ACCGA035558GA035559
length6481,126
definitionB6Ng01-219N09.b B6Ng01-219N09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatagctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcagatcaaagcaaccctgagat
tccacttcacaccagtcagaatagctaagatcaaaaattcaggtgacagc
agatcctggtgaggatgtggaggaagaggaatgttcctccattgttgatg
ggattgcaagctgatacaatcactctggaaatcagtctggcgattcctca
gaaaattagacatagtactaccggaagatccaacaattcctctcctgggc
atataccaggaagattttccaacttgtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagagaatggatacagaaaatgtggtacatttacacaatgg
agtactactcagcaattaaaaacaatgaattcatgaaatagttaggcaaa
tggatacatctggaggatatcatcttgagtgaggtaacccaatcacagaa
gaacacacatggtatgcacccactgataagtagatattagcccagaaact
tagaatattcaagatacaatttgcaaaacacatgaaactcaagaagaa

gaattcatgctcaacttccccaactactgggaaaagacaattgaatccag
caatgagctatttttatatatctagttaattgttatttgcagggagtctg
caaataccatgggcagcatagtatttcataaagcaagaaggaagttgggt
tcagcatgaacccatgtatctagttttgcatcaagtttcctgaatctgag
actacggagttgattttagatatatttaagcagagagcaatttgggagca
aaattttcttgatgataataagctcaattctgtatgtgcaataaagcttt
agacatgactaaattgaaactcttcaaaatatgtgatggtcaaagcagct
agaagcagccagaacaccatcagttttggtgcatgtttctttctttacaa
agtcagggcaagcaaagatgaggaaagaaagcaaagtccaatgaagaaca
acaaggccaaccaatgccagagcaacctcagtgaagaccagcaaggcaag
actcaaggaagaccagcaaggtgaaccaaatgccagagcatcagctactg
tctgtggggttatacttatacttttcccaaacatgtctcttcaaatttct
gctccagtaaaacatcacatgcctttcgccagatagcttccagaaaaata
gtgtgtgtgtgtctgttctcagcaaagcatcctctcatttgtatccatca
gcaaaacatcctctcataagacagaaaacatcacatgacagaattgagtt
tccagtaaaaacagaaattcccacttcaattaatttttaaaattcctgtt
tattaaatgttcatatgcatgtgtggatatttaaaatgcaaaacatatgc
atttctaggtatataatataaataaaacactaaagtacatgggagaaaga
taacaactaaatttacaatagtgctaattgctagagaagtgtaaaggaaa
agaaccatgatctagtaggatgcgctgaaaaatttaattttatcctattt
ataaaaagaataatttgagacaaatataacaatgttacattttgtaagta
gaaagttttatattccctttgttttggagcattctacttgggtgaactga
gctgactaaaattagacctcagtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16756308_16757441
seq2: B6Ng01-219N09.g_67_1192

seq1  GAATTCATGCTCAACTTCCCCAACTACTGGGAAAAGACAATTGAATCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCTCAACTTCCCCAACTACTGGGAAAAGACAATTGAATCCAG  50

seq1  CAATGAGCTATTTTTATATATCTAGTTAATTGTTATTTGCAGGGAGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGCTATTTTTATATATCTAGTTAATTGTTATTTGCAGGGAGTCTG  100

seq1  CAAATACCATGGGCAGCATAGTATTTCATAAAGCAAGAAGGAAGTTGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACCATGGGCAGCATAGTATTTCATAAAGCAAGAAGGAAGTTGGGT  150

seq1  TCAGCATGAACCCATGTATCTAGTTTTGCATCAAGTTTCCTGAATCTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCATGAACCCATGTATCTAGTTTTGCATCAAGTTTCCTGAATCTGAG  200

seq1  ACTACGGAGTTGATTTTAGATATATTTAAGCAGAGAGCAATTTGGGAGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACGGAGTTGATTTTAGATATATTTAAGCAGAGAGCAATTTGGGAGCA  250

seq1  AAATTTTCTTGATGATAATAAGCTCAATTCTGTATGTGCAATAAAGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCTTGATGATAATAAGCTCAATTCTGTATGTGCAATAAAGCTTT  300

seq1  AGACATGACTAAATTGAAACTCTTCAAAATATGTGATGGTCAAAGCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATGACTAAATTGAAACTCTTCAAAATATGTGATGGTCAAAGCAGCT  350

seq1  AGAAGCAGCCAGAACACCATCAGTTTTGGTGCATGTTTCTTTCTTTACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCAGCCAGAACACCATCAGTTTTGGTGCATGTTTCTTTCTTTACAA  400

seq1  AGTCAGGGCAAGCAAAGATGAGGAAAGAAAGCAAAGTCCAATGAAGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGGGCAAGCAAAGATGAGGAAAGAAAGCAAAGTCCAATGAAGAACA  450

seq1  ACAAGGCCAACCAATGCCAGAGCAACCTCAGTGAAGACCAGCAAGGCAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCAACCAATGCCAGAGCAACCTCAGTGAAGACCAGCAAGGCAAG  500

seq1  ACTCAAGGAAGACCAGCAAGGTGAACCAAATGCCAGAGCATCAGCTACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGGAAGACCAGCAAGGTGAACCAAATGCCAGAGCATCAGCTACTG  550

seq1  TCTGTGGGGTTATACTTATACTTTTCCCAAACATGTCTCTTCAAATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGGGTTATACTTATACTTTTCCCAAACATGTCTCTTCAAATTTCT  600

seq1  GCTCCAGTAAAACATCACATGCCTTTCGCCAGATAGCTTCCAGAAAAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGTAAAACATCACATGCCTTTCGCCAGATAGCTTCCAGAAAAATA  650

seq1  GTGTGTGTGTGTCTGTTCTCAGCAAAGCATCCTCTCATTTGTATCCATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTCTGTTCTCAGCAAAGCATCCTCTCATTTGTATCCATCA  700

seq1  GCAAAACATCCTCTCATAAGACAGAAAACATCACATGACAGAATTGAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACATCCTCTCATAAGACAGAAAACATCACATGACAGAATTGAGTT  750

seq1  TCCAGTAAAAACAGAAATTCCCACTTCAATTAATTTTTAAAATTCCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTAAAAACAGAAATTCCCACTTCAATTAATTTTTAAAATTCCTGTT  800

seq1  TATTAAATGTTCATATGCATGTGTGGATATTTAAAATGCAAAACATATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATGTTCATATGCATGTGTGGATATTTAAAATGCAAAACATATGC  850

seq1  ATTTCTAGGTATATAATATAAATAAAACACTAAAGTACATGGGAGAAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAGGTATATAATATAAATAAAACACTAAAGTACATGGGAGAAAGA  900

seq1  TAACAACTAAA-TTACAATAGTGCTAATTGCTAGAGAAGTGT-AAGGAAA  948
      ||||||||||| |||||||||||||||||||||||||||||| |||||||
seq2  TAACAACTAAATTTACAATAGTGCTAATTGCTAGAGAAGTGTAAAGGAAA  950

seq1  AGAACCATGATCTAGTAGGAATGCGCTGAAAAATTTAATTTTATCCTATT  998
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAACCATGATCTAGTAGG-ATGCGCTGAAAAATTTAATTTTATCCTATT  999

seq1  TATAAAAAGAATAA-TTGAGAACAAATATAACAATGTTACATTTTGTTAG  1047
      |||||||||||||| ||||| |||||||||||||||||||||||||| ||
seq2  TATAAAAAGAATAATTTGAG-ACAAATATAACAATGTTACATTTTGTAAG  1048

seq1  TAGAAAGTTTTATATTCCCTTTGTTTTTGGAGCATTTTCTTAACTTTGGG  1097
      ||||||||||||||||||||||| |||||||||||| |    || |||||
seq2  TAGAAAGTTTTATATTCCCTTTG-TTTTGGAGCATTCT----AC-TTGGG  1092

seq1  TGAACTGAAGCTGGACTAAAA-TAGACCCTTCAGTGAA  1134
      ||||||| |||| |||||||| ||||||  ||||||||
seq2  TGAACTG-AGCT-GACTAAAATTAGACC--TCAGTGAA  1126


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