BAC Information

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BAC

Clone NameB6Ng01-222M02
Chromosome4 (Build37)
Map Location 95,937,104 - 95,938,208
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042411, 2310009E04Rik, Hook1, Cyp2j13, LOC242546, LOC546837
Downstream geneCyp2j11, LOC665095, Cyp2j6, Cyp2j9, Cyp2j5, LOC100039415, LOC620779
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222M02.bB6Ng01-222M02.g
ACCGA037686GA037687
length1,1151,106
definitionB6Ng01-222M02.b B6Ng01-222M02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtgcttgtttatctcctctgagtcacttgtaaattttactag
aaaccaagtgcaattatgcatgtacttgtttcagtgtcatggagttcata
aattcataatttaataatttttcagttcacttctcctatcctggaatttg
acatgccttgtgttttggtattacagtttatgctttcttggacatctatt
ctggagtgtatggaagtaacagttacataatgttttagcttgaccatact
atgggcatacatagttccagaaagaatgaatttgaaccaccagtactggt
cctttaaaagttcattttctatttaagatcttctgtttatatgcatcaaa
ttctctttgattcaccaaaaggtggatttttttctaacttgtgctatccc
tatcatcacttttttctcaagttcaaggatgccttcactgaaaactaaga
aactggttaacatgaatcataggcatgaaaaggaacataaagaatgacct
cttagtttcacttattgcctacactatttcatgctccttgttttatctaa
tactcatggtagttccaactacaacaacttatggctttcttcccagtaag
cagagcctagaacatcagtggagatcagtgagtgcccagccaacttctaa
gtgtttatcgggggaaaaaaaccttaaaggggaaaaaagaggtggcagag
tgtaatgataaatattcctggaaagccgagttaagtcccccaatttcata
gacagctggaaaatccgtttattttcacaatgcccctctacatagaaaat
gtggcagcaggtaccctgcccagccagagaacctcactacttccagattg
cacctgttcccacagcagaacatctgcttctggatcccacccactcagca
cacactgagtttgcaacttaaactcacccatccccaaggtgttctaacac
atccaggatcacaggtgagaccccaatcccttgccccaatgtctggtata
ttcaggaccatggaaaacacagggatgcaggtaccccacttaaccagaga
ccccatgctcatttccaggtttgcacctgggccttggagcaggagactct
gcttctggatcccta
gaattcctttcttgcttttcctagggcatgatttccgtccttgtattagt
tttttttttttctgttattatcctttgaagggctggatttgtggaaagat
aatgtgtgaatttggttttgtcgtggaatactttggtttctccatcaatg
gtaattgagagtttggtcgggtatagtagcctgggctggcatttgtgttc
tcttagtgtctgtataacatctgtcgaggctcttctggctttcagagtct
ctggtgaaaagtctggtgtaattctgataggcctgcctttatatgttact
tgacctttctcccttactgcttttaatattctatctttatttagtgcatt
tgttgttctgattattatgtgtcgggaggaatttcttttctggtccactc
tatttggagttctgtaggcttcttgtatgatcatgggcatctctttcctt
atgtttgggaagttttcttctattattttgttgaagatgtttgctggccc
tttaagttgaaaatcttcattctcatcaactcctattatccgtaggtttg
gtcttctcattctgtcctggatttcctggatgttttgagttaggatcctt
ttgtagtttgtattttctttgattgttgtgtcaatgttctctatggaatc
ttctgcacctgagattcattcttccatctcttgtattctgttgctgatgc
tcgcatctatggttccagatttctttcctagtgtttctatctccagagtt
gcctcacttttgggttttctttattgtgtctacttccctttctaggtcta
gtatggttttgttcatttccatcacctgtttgtatgtgttttcctgtttt
tctttaaggacttctaccctgtttggttgtgttttcctgtttttctttaa
ggacctgtaactctttaacagtgctcctcctgtatttctttaagtgagta
atgaagtccttcttgatgtcctctaccatcatcatgagatatgcttttaa
atcctgggtctagaattttcagttgttttggggtgcccagaactagtggg
gtggaccgccttgcttctgatgaacggcgactgaccttgaatttctggct
acgtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_95937104_95938208
seq2: B6Ng01-222M02.b_47_1161 (reverse)

seq1  TAGGGATCCAG-AGCAGAGTCT-CTGCTCC-AGGCCCAGGTGCAAA-CTG  46
      ||||||||||| |||||||||| ||||||| ||||||||||||||| |||
seq2  TAGGGATCCAGAAGCAGAGTCTCCTGCTCCAAGGCCCAGGTGCAAACCTG  50

seq1  G-AATGAGCAT-GGGTCTCTGGTTTAGTGGGGTACCTGCATCCCTGTG-T  93
      | ||||||||| |||||||||||| ||||||||||||||||||||||| |
seq2  GAAATGAGCATGGGGTCTCTGGTTAAGTGGGGTACCTGCATCCCTGTGTT  100

seq1  TTCCATGGTCCTGAATATACCAGACATTGGGGC-AGGGATTGGGGTCTCA  142
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCCATGGTCCTGAATATACCAGACATTGGGGCAAGGGATTGGGGTCTCA  150

seq1  CCTGTGATCCTGGATGTGTTAGAACACCTTGGGGATGGGTGAGTTTAAGT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGATCCTGGATGTGTTAGAACACCTTGGGGATGGGTGAGTTTAAGT  200

seq1  TGC-AACTCAGTGTGTGCTGAGTGGGTGGGATCCAG-AGCAGATGTTCTG  240
      ||| |||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGCAAACTCAGTGTGTGCTGAGTGGGTGGGATCCAGAAGCAGATGTTCTG  250

seq1  CTGTGGGAACAGGTGCAATCTGGAAGTAGTGAGGTTCTCTGGCTGGGCAG  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGAACAGGTGCAATCTGGAAGTAGTGAGGTTCTCTGGCTGGGCAG  300

seq1  GGTACCTGCTGCCACATTTTCTATGTAGAGGGGCATTGTGAAAATAAACG  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACCTGCTGCCACATTTTCTATGTAGAGGGGCATTGTGAAAATAAACG  350

seq1  GATTTTCCAGCTGTCTATGAAATTGGGGGACTTAACTCGGCTTTCCAGGA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCCAGCTGTCTATGAAATTGGGGGACTTAACTCGGCTTTCCAGGA  400

seq1  ATATTTATCATTACACTCTGCCACCTCTTTTTTCCCCTTTAAGGTTTTTT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATCATTACACTCTGCCACCTCTTTTTTCCCCTTTAAGGTTTTTT  450

seq1  TCCCCCGATAAACACTTAGAAGTTGGCTGGGCACTCACTGATCTCCACTG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCGATAAACACTTAGAAGTTGGCTGGGCACTCACTGATCTCCACTG  500

seq1  ATGTTCTAGGCTCTGCTTACTGGGAAGAAAGCCATAAGTTGTTGTAGTTG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTAGGCTCTGCTTACTGGGAAGAAAGCCATAAGTTGTTGTAGTTG  550

seq1  GAACTACCATGAGTATTAGATAAAACAAGGAGCATGAAATAGTGTAGGCA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTACCATGAGTATTAGATAAAACAAGGAGCATGAAATAGTGTAGGCA  600

seq1  ATAAGTGAAACTAAGAGGTCATTCTTTATGTTCCTTTTCATGCCTATGAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGAAACTAAGAGGTCATTCTTTATGTTCCTTTTCATGCCTATGAT  650

seq1  TCATGTTAACCAGTTTCTTAGTTTTCAGTGAAGGCATCCTTGAACTTGAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTTAACCAGTTTCTTAGTTTTCAGTGAAGGCATCCTTGAACTTGAG  700

seq1  AAAAAAGTGATGATAGGGATAGCACAAGTTAGAAAAAAATCCACCTTTTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTGATGATAGGGATAGCACAAGTTAGAAAAAAATCCACCTTTTG  750

seq1  GTGAATCAAAGAGAATTTGATGCATATAAACAGAAGATCTTAAATAGAAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATCAAAGAGAATTTGATGCATATAAACAGAAGATCTTAAATAGAAA  800

seq1  ATGAACTTTTAAAGGACCAGTACTGGTGGTTCAAATTCATTCTTTCTGGA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTTTAAAGGACCAGTACTGGTGGTTCAAATTCATTCTTTCTGGA  850

seq1  ACTATGTATGCCCATAGTATGGTCAAGCTAAAACATTATGTAACTGTTAC  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTATGCCCATAGTATGGTCAAGCTAAAACATTATGTAACTGTTAC  900

seq1  TTCCATACACTCCAGAATAGATGTCCAAGAAAGCATAAACTGTAATACCA  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATACACTCCAGAATAGATGTCCAAGAAAGCATAAACTGTAATACCA  950

seq1  AAACACAAGGCATGTCAAATTCCAGGATAGGAGAAGTGAACTGAAAAATT  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACAAGGCATGTCAAATTCCAGGATAGGAGAAGTGAACTGAAAAATT  1000

seq1  ATTAAATTATGAATTTATGAACTCCATGACACTGAAACAAGTACATGCAT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATTATGAATTTATGAACTCCATGACACTGAAACAAGTACATGCAT  1050

seq1  AATTGCACTTGGTTTCTAGTAAAATTTACAAGTGACTCAGAGGAGATAAA  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCACTTGGTTTCTAGTAAAATTTACAAGTGACTCAGAGGAGATAAA  1100

seq1  CAAGCACTTGAATTC  1105
      |||||||||||||||
seq2  CAAGCACTTGAATTC  1115