BAC Information

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BAC

Clone NameB6Ng01-224H09
Chromosome4 (Build37)
Map Location 6,444,617 - 6,445,603
singlet/doubletsinglet
Overlap genenone
Upstream gene1700012H17Rik, LOC669309, 3110003A22Rik, Cyp7a1, Sdcbp, Nsmaf, LOC100039397
Downstream geneLOC100039414, Tox, LOC100039421, LOC666700
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224H09.bB6Ng01-224H09.g
ACCGA038913GA038914
length1,201992
definitionB6Ng01-224H09.b B6Ng01-224H09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttccagaacctttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatctattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattccttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatctttccttaattttcttttcttcagagatttgaagtttttatc
atacagatcttttcacttccttaggtagagtcacgccaagatattttata
ttatttgtgactattgagaggtgttgtttccctaattcttctcagcctgt
ttatcttgataagagaaaggccatgacttgttgagtttattttaaatcag
ctacttcaccgaagctgtttctccagttaggagtctcttggtagaatttt
agggtccactatattactatcatatccatctgcaaaagcgtaattgactt
cctttaccaattgtgtatcccttgaatcatcatttggtgacgacgaatga
t

gaattctcttttcagaaaaacctctctctgtctctctctctttgtctctg
tctctctctgcctctctctttctgtgtctttgtctctctctctcttctga
catttttcagcttctgggtgccatatagatcatacagtactaatttctgt
tttccctcttagactttatttttccaactatgaaacaaataacttcctga
ctcagctaaaaactgcagaaagccatgttcagcttatgcagggttttcct
ctctccactactgactctttacaatgaaattgaaagtttagaggcagctt
acagaaagtgaaagttagaagcagtttgcagaaggccattaagataaaac
caggcaaaagcccagatcatgaagcaacagggaaaagggactaaggagag
gaagtgacaagcagtctctcatctaagatccaaactggtggcctcaagag
ctaggagcacagtgggcatcctgagagcataccttctgcaggttttccgt
aggaggcaggagcagtgaagacactggtggaatacatacagtgatgtctc
acctcagagtgtgctttagacatagacctctttttggaatcttggtccca
gcttggtgatgtacaaagtgatggcacctgtcagagatggggtttagtgg
aaagtaaataggttttaggggtactgttctaagaagcaattgttaatgtt
ggtcttgtagagtgttagctctctacagagtaaactgctaataggaagag
caagttgccccctactgtgttggactccctgtcttttcttatttgtgctt
tcagccatgacatccaccagaatactcctaccattgtccagttagtattt
gctgaccaattttgaactgtgaactaaataaatatcctcttttttctttt
tgatatcatgccttgctgtgcttattattatttggggggtttgttacagc
cccttgttgcttttaaatgttattttgggatttctaccccac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_6444617_6445603
seq2: B6Ng01-224H09.g_70_1061

seq1  GAATTCTCTTTTCAGAAAAACCTCTCTCTGTCTCTCTCTCTTTGTCTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTTCAGAAAAACCTCTCTCTGTCTCTCTCTCTTTGTCTCTG  50

seq1  TCTCTCTCTGCCTCTCTCTTTCTGTGTCTTTGTCTCTCTCTCTCTTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTGCCTCTCTCTTTCTGTGTCTTTGTCTCTCTCTCTCTTCTGA  100

seq1  CATTTTTCAGCTTCTGGGTGCCATATAGATCATACAGTACTAATTTCTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTCAGCTTCTGGGTGCCATATAGATCATACAGTACTAATTTCTGT  150

seq1  TTTCCCTCTTAGACTTTATTTTTCCAACTATGAAACAAATAACTTCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTCTTAGACTTTATTTTTCCAACTATGAAACAAATAACTTCCTGA  200

seq1  CTCAGCTAAAAACTGCAGAAAGCCATGTTCAGCTTATGCAGGGTTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTAAAAACTGCAGAAAGCCATGTTCAGCTTATGCAGGGTTTTCCT  250

seq1  CTCTCCACTACTGACTCTTTACAATGAAATTGAAAGTTTAGAGGCAGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACTACTGACTCTTTACAATGAAATTGAAAGTTTAGAGGCAGCTT  300

seq1  ACAGAAAGTGAAAGTTAGAAGCAGTTTGCAGAAGGCCATTAAGATAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAGTGAAAGTTAGAAGCAGTTTGCAGAAGGCCATTAAGATAAAAC  350

seq1  CAGGCAAAAGCCCAGATCATGAAGCAACAGGGAAAAGGGACTAAGGAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAAAGCCCAGATCATGAAGCAACAGGGAAAAGGGACTAAGGAGAG  400

seq1  GAAGTGACAAGCAGTCTCTCATCTAAGATCCAAACTGGTGGCCTCAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGACAAGCAGTCTCTCATCTAAGATCCAAACTGGTGGCCTCAAGAG  450

seq1  CTAGGAGCACAGTGGGCATCCTGAGAGCATACCTTCTGCAGGTTTTCCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGCACAGTGGGCATCCTGAGAGCATACCTTCTGCAGGTTTTCCGT  500

seq1  AGGAGGCAGGAGCAGTGAAGACACTGGTGGAATACATACAGTGATGTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCAGGAGCAGTGAAGACACTGGTGGAATACATACAGTGATGTCTC  550

seq1  ACCTCAGAGTGTGCTTTAGACATAGACCTCTTTTTGGAATCTTGGTCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGAGTGTGCTTTAGACATAGACCTCTTTTTGGAATCTTGGTCCCA  600

seq1  GCTTGGTGATGTACAAAGTGATGGCACCTGTCAGAGATGGGGTTTAGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTGATGTACAAAGTGATGGCACCTGTCAGAGATGGGGTTTAGTGG  650

seq1  AAAGTAAATAGGTTTTAGGGGTACTGTTCTAAGAAGCAATTGTTAATGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAAATAGGTTTTAGGGGTACTGTTCTAAGAAGCAATTGTTAATGTT  700

seq1  GGTCTTGTAGAGTGTTAGCTCTCTACAGAGTAAACTGCTAATAGGAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGTAGAGTGTTAGCTCTCTACAGAGTAAACTGCTAATAGGAAGAG  750

seq1  CAAGTTGCCCCCTACTGTGTTGGACTCCCTGTC-TTTCTTATTTGTGC-T  798
      ||||||||||||||||||||||||||||||||| |||||||||||||| |
seq2  CAAGTTGCCCCCTACTGTGTTGGACTCCCTGTCTTTTCTTATTTGTGCTT  800

seq1  TCAGCCATGACATCCACCAGAATACTCCTACCATTGTCCAGTTAGTA-TT  847
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCAGCCATGACATCCACCAGAATACTCCTACCATTGTCCAGTTAGTATTT  850

seq1  GCTGACCAATTTTGAACTGTGAACTAAATAAATATCCTC-TTTTTCTTTT  896
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCTGACCAATTTTGAACTGTGAACTAAATAAATATCCTCTTTTTTCTTTT  900

seq1  GAATATCATGCCTTGCTGTGCTTATTATTATTTGGGGGG-TTGTTACAGC  945
        ||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGATATCATGCCTTGCTGTGCTTATTATTATTTGGGGGGTTTGTTACAGC  950

seq1  CCCTTGTTGCTTTTAAATGTTTATTTTGGATTTCTACCCCAC  987
      |||||||||||||||||||||  ||| |||||||||||||||
seq2  CCCTTGTTGCTTTTAAATGTTATTTTGGGATTTCTACCCCAC  992


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