BAC Information

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BAC

Clone NameB6Ng01-233L06
Chromosome4 (Build37)
Map Location 16,802,490 - 16,803,588
singlet/doubletsinglet
Overlap genenone
Upstream geneCalb1, Decr1, Nbn, Osgin2, Ripk2, LOC667150, LOC383994
Downstream geneLOC100040154, LOC667212, LOC100040173, Mmp16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233L06.bB6Ng01-233L06.g
ACCGA045684GA045685
length1,1891,098
definitionB6Ng01-233L06.b B6Ng01-233L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacttggacaaccagatccttctacagcaaagcttttattgctta
cttctcaggaagaccccgaacccagaaaatggcgctggttatatagcccg
cagtgtgacatttcagcacctgatgtggcgtgacagcacctgattagttg
ctcgcccatcaccccattactacgccccgatatgggcagtgactgggtgt
gaattcactcttgcacttgcgcataaggcttatttactagttaggcgcag
tggaagccagcgccatcttataatggcgattgctcacagcacggctctcc
tcacagcctggcccttacagctcactgccactcatttaaaacacataggt
caaacataggacactttacaaagctccaaactgctaacatggtcagacaa
aaacaaacaaacaaaaaaaaaaccaataccctttgtggttaaaggtcttc
ctgtgaatctatggggaagagacatactctcccacatggggatgataatg
tttagccccaacgagactgtcaccaatttgatgctaaaaacagggtacct
cccagggaaaggtctagggaaagatgaacaaggaaggatttctcccacta
tgcccacaccccaaaatgataaaaagggtttaggggcagacttttttcct
tagagaccattgctcctcctgcatttcaggcagacaaattatcttggaat
tccaatgatcctgtctggatcgatcagtggtctatgcctcaagagaaagt
tcagagagccttacagttggtgcaggaacaattgagactgtcacatcttg
agccttctacctcccgtggaaaacaccgatatttgtcataaaaaagaaaa
gtggagcctggaggctgttacagggaccttcgagctgtaaataagaccat
gatgctgatggggggcactacaaccaggcttaaccattcctatcgaaatt
ccagaggttattctataatggtcatggatattaagattgcttcttttcta
tcccactcatcctcgagattatgttcggtttggccttttcattccaattg
taaatcacgtggggaaccaaggtcccaatttcaattgccggcttacccca
ggtaattggctatagcccttacctcatgcagaaaaatgtgaccgatatat
ccttgaaacaggaaatccctgtagtgccataataatcta
gaattcaaagtagtggagagcaaggctgtatctaggagcaaaagcatgta
ttccaactcactggggatcatgaaggtattgctactctggttgtagtgtg
acaatcaaagtagtgtgacaatcaaaccatgcaacagaaactaaagcctg
cccacagaaagtgtcattctccaaggaagtcacctagccaccttgcaact
tcatgacagataaattcatttggtcagaactgatacacttaagtttcagg
tttaagttttgttttcacaaactatctgccagaaccattaattgagggca
tttagtatagttgttctgtgattagaactgctgacttggctgggcagttg
tggctcacacatttaatcccagcacttgagaggcagaagcaggcagattt
ctgagtttgaggccagcctggtttacagagtgagtcccaggacagccagg
ctacacagagaaaccctgtctcaagaaaccctgtctcgaaaaaacaataa
acaaacaaacaaacaaacaaacaaatagaactgctgacttgaaagaatga
tatataagcatattgatattttagatgacttaattttcaggaacaggaaa
gacagtatttaaaaacttttactgatatttgttggtaagtaaatcaacaa
ccactattcagtgtttcatctctggtacaaagaacacattggcctagaaa
ctaaggggctgaattgtgaattattgttttccatgatatgcaaaatggtt
tagaatggggttaatatctaacagggaaacaatacctctcctaatagaca
tcataggctaacaaattaaaaagtccagtgtcaggaatggattacttctt
ttggagatgttatactcaattttctactatatacatctactatcaatatt
aattttaattaatatacaaagacaaaaatgtttttctttttaatattcgg
atccttaacatggacaacaatatttttcactgataatttgatcaaatcag
aaaagtggtgtgtctttacaggtgaaactatatgctttgttttggatttt
tgttaaaagtatttagacaactaaattggagggaagaacattcctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_16802490_16803588
seq2: B6Ng01-233L06.g_63_1160

seq1  GAATTCAAAGTAGTGGAGAGCAAGGCTGTATCTAGGAGCAAAAGCATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTAGTGGAGAGCAAGGCTGTATCTAGGAGCAAAAGCATGTA  50

seq1  TTCCAACTCACTGGGGATCATGAAGGTATTGCTACTCTGGTTGTAGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACTCACTGGGGATCATGAAGGTATTGCTACTCTGGTTGTAGTGTG  100

seq1  ACAATCAAAGTAGTGTGACAATCAAACCATGCAACAGAAACTAAAGCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCAAAGTAGTGTGACAATCAAACCATGCAACAGAAACTAAAGCCTG  150

seq1  CCCACAGAAAGTGTCATTCTCCAAGGAAGTCACCTAGCCACCTTGCAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGAAAGTGTCATTCTCCAAGGAAGTCACCTAGCCACCTTGCAACT  200

seq1  TCATGACAGATAAATTCATTTGGTCAGAACTGATACACTTAAGTTTCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACAGATAAATTCATTTGGTCAGAACTGATACACTTAAGTTTCAGG  250

seq1  TTTAAGTTTTGTTTTCACAAACTATCTGCCAGAACCATTAATTGAGGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTTTTGTTTTCACAAACTATCTGCCAGAACCATTAATTGAGGGCA  300

seq1  TTTAGTATAGTTGTTCTGTGATTAGAACTGCTGACTTGGCTGGGCAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATAGTTGTTCTGTGATTAGAACTGCTGACTTGGCTGGGCAGTTG  350

seq1  TGGCTCACACATTTAATCCCAGCACTTGAGAGGCAGAAGCAGGCAGATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCACACATTTAATCCCAGCACTTGAGAGGCAGAAGCAGGCAGATTT  400

seq1  CTGAGTTTGAGGCCAGCCTGGTTTACAGAGTGAGTCCCAGGACAGCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTTTGAGGCCAGCCTGGTTTACAGAGTGAGTCCCAGGACAGCCAGG  450

seq1  CTACACAGAGAAACCCTGTCTCAAGAAACCCTGTCTCGAAAAAACAATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACAGAGAAACCCTGTCTCAAGAAACCCTGTCTCGAAAAAACAATAA  500

seq1  ACAAACAAACAAACAAACAAACAAATAGAACTGCTGACTTGAAAGAATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAACAAACAAATAGAACTGCTGACTTGAAAGAATGA  550

seq1  TATATAAGCATATTGATATTTTAGATGACTTAATTTTCAGGAACAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAAGCATATTGATATTTTAGATGACTTAATTTTCAGGAACAGGAAA  600

seq1  GACAGTATTTAAAAACTTTTACTGATATTTGTTGGTAAGTAAATCAACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTATTTAAAAACTTTTACTGATATTTGTTGGTAAGTAAATCAACAA  650

seq1  CCACTATTCAGTGTTTCATCTCTGGTACAAAGAACACATTGGCCTAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATTCAGTGTTTCATCTCTGGTACAAAGAACACATTGGCCTAGAAA  700

seq1  CTAAGGGGCTGAATTGTGAATTATTGTTTTCCATGATATGCAAAATGGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGGGCTGAATTGTGAATTATTGTTTTCCATGATATGCAAAATGGTT  750

seq1  TAGAATGGGGTTAATATCTAACAGGGAAACAATACCTCTCCTAATAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGGGGTTAATATCTAACAGGGAAACAATACCTCTCCTAATAGACA  800

seq1  TCATAGGCTAACAAATTAAAAAGTCCAGTGTCAGGAATGGATTACTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGGCTAACAAATTAAAAAGTCCAGTGTCAGGAATGGATTACTTCTT  850

seq1  TTGGAGATGTTATACTCAATTTTCTACTATATACATCTACTATCAAATAT  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGGAGATGTTATACTCAATTTTCTACTATATACATCTACTATC-AATAT  899

seq1  TAATTTTAATTAATATACAAAGACAAAAAATGTTTTTCTTTTTAATATTC  950
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TAATTTTAATTAATATACAAAGAC-AAAAATGTTTTTCTTTTTAATATTC  948

seq1  GGATCCTTAACATGGACAACAATA-TTTTCACTGATAATTTGATCAAATC  999
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGATCCTTAACATGGACAACAATATTTTTCACTGATAATTTGATCAAATC  998

seq1  AGAAAAGT-GTGTGTCTTTACAAGGTGAAACTATATGCTTTGTTTTTGA-  1047
      |||||||| |||||||||||| |||||||||||||||||||||||| || 
seq2  AGAAAAGTGGTGTGTCTTTAC-AGGTGAAACTATATGCTTTGTTTTGGAT  1047

seq1  TTTTGTTAAAAGTATTTAGACAACTAAAATTTGAGGGAAGAACATTTCTG  1097
      ||||||||||||||||||||||||| ||||| |||||||||||||| |||
seq2  TTTTGTTAAAAGTATTTAGACAACT-AAATTGGAGGGAAGAACATTCCTG  1096

seq1  AT  1099
      ||
seq2  AT  1098