BAC Information

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BAC

Clone NameB6Ng01-237H02
Chromosome4 (Build37)
Map Location 147,851,706 - 147,852,873
singlet/doubletsinglet
Overlap geneFrap1
Upstream geneOTTMUSG00000010671, LOC545718, OTTMUSG00000010673, 2610305D13Rik, LOC666618, LOC100043100, LOC666640, LOC194189, LOC666652, LOC100041677, LOC277692, MGC67181, D4Wsu114e, Fv1, Mfn2, Plod1, 2510039O18Rik, Nppb, Nppa, Clcn6, Mthfr, LOC433806, Agtrap, 2610109H07Rik, Mad2l2, Fbxo6, Fbxo44, Fbxo2, Ptchd2, Ubiad1
Downstream geneAngptl7, Exosc10, LOC100043151, Srm, Masp2, Tardbp, Gm572, LOC100041733, LOC100041742, LOC100041755, Casz1, Pex14, LOC670864, Dffa, Cort, Apitd1, LOC666774, Pgd, Kif1b, LOC100041794, Ube4b, Rbp7, LOC627985, Nmnat1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237H02.bB6Ng01-237H02.g
ACCGA048399GA048400
length2191,179
definitionB6Ng01-237H02.b B6Ng01-237H02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atgccatcctgaagacattagggttatgaaatgctcctggcaggaaggat
ccaagaaaggggagagagagagagagagagagagagagagagagagagag
agagagagagagagagagagagtatgaatagatagatagatagatagata
gatagatagatagatagatagatagatagatagatagatactaagacctt
gtatggcgggtgtgcttta
gaattctcctcccactgtgaaaaactggaaattaatgcacgagaaagcag
atcatcagaatccaactgtttttcgtaaacccataattttaatgggatac
atcttaagagaaacagtgaatttcaacaaaacaaaaccccctcctactgg
caaaaggagacaaagaaatcatgagttttaatgtaactaactctcctaga
agagctgaccacctaaggctgactctcaaatgggctaactacccgggtgg
cctgggaacaagccagacactgacttcaagttgtcctgggtcacttgcac
tgaagcaaaagcacacctgctcctttccgctcttcagagcagatgttcca
ggctgctctggggactgagtagatgaagatggccacagaacacccagaga
gagcaagggaccagagaaacaaaaagcagtgaactaggcgaacccaggcc
ttagagaaaatagctatcatcaccctaaaagcgtaaatctatttaagatg
cttacagaaatcaaaataggaatataaaacacaagacaggttgatggcac
acgccactaatcccagcactcaggaggcacatctctgttgagttccaggc
tagcctgatctacagagtgagttccaagacagccaggactccacagagaa
accctgtctcaaaaaaaccaaaccaaagcaaacaaacaaacaaaacccaa
agagccaaaccaaacaaaaaagaaaagtaaaaagaaaattgtaaaataat
tgaaatacaaagtttataaaataaatttgtaaataaaatttatacttaat
actgtttcctctggattgaaactttccgacctaaagggagactcctgaaa
ctcacaaaatgctctcaagactcaagaagttcagagaactttagaaaggg
gagaatttgcttactatggccctgttgtgaagggacctgggctgtgaccc
atgctggggtggggtcttaggaggtggcggctgcctggagtcacccactg
tttctctaacctcaatagtcaactactgtaccaggtgggtttggagggcc
atctttcaattgcctctgttgcctacctttcagatgaacacaggagaaca
cctcagttgtaatacagttaaccaacacacataaagccaacttgatgtac
ctctggtcctattgagaatggggtcaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_147851706_147852873
seq2: B6Ng01-237H02.g_65_1243 (reverse)

seq1  TGTTAACCCC-TTCT-AATAGGGACAGA-GTACATCAAGTTTGCTTTTAT  47
      |||| ||||| |||| ||||||  |||| |||||||||||| || |||||
seq2  TGTTGACCCCATTCTCAATAGGACCAGAGGTACATCAAGTTGGC-TTTAT  49

seq1  GTGTGT--GTT-ACTGTATTACAACTGA-GTG-TCTCTTGTGTTCATCTG  92
      ||||||  ||| |||||||||||||||| ||| |||| ||||||||||||
seq2  GTGTGTTGGTTAACTGTATTACAACTGAGGTGTTCTCCTGTGTTCATCTG  99

seq1  AAAGGGTAGCAACAGA-GCAATGGAAAGAT-GCCCTCC-AACCCACCTTG  139
      |||||   |||||||| ||||| ||||||| ||||||| |||||||| ||
seq2  AAAGGTAGGCAACAGAGGCAATTGAAAGATGGCCCTCCAAACCCACC-TG  148

seq1  GTACAGTAG-TGACTATTGAGGTTAGAGAAACAGTGGGTGACTCCAGGCA  188
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGTAGTTGACTATTGAGGTTAGAGAAACAGTGGGTGACTCCAGGCA  198

seq1  GCCG-CACCTCCTAAGACCCCACCCCAGCATGGGTCACAGCCCAGGTCCC  237
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCCACCTCCTAAGACCCCACCCCAGCATGGGTCACAGCCCAGGTCCC  248

seq1  TTCACAACAGGGCCATAGTAAGCAAATTCTCCCCTTTCTAAAGTTCTCTG  287
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAACAGGGCCATAGTAAGCAAATTCTCCCCTTTCTAAAGTTCTCTG  298

seq1  AACTTCTTGAGTCTTGAGAGCATTTTGTGAGTTTCAGGAGTCTCCCTTTA  337
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCTTGAGTCTTGAGAGCATTTTGTGAGTTTCAGGAGTCTCCCTTTA  348

seq1  GGTCGGAAAGTTTCAATCCAGAGGAAACAGTATTAAGTATAAATTTTATT  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGGAAAGTTTCAATCCAGAGGAAACAGTATTAAGTATAAATTTTATT  398

seq1  TACAAATTTATTTTATAAACTTTGTATTTCAATTATTTTACAATTTTCTT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAATTTATTTTATAAACTTTGTATTTCAATTATTTTACAATTTTCTT  448

seq1  TTTACTTTTCTTTTTTGTTTGGTTTGGCTCTTTGGGTTTTGTTTGTTTGT  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTTCTTTTTTGTTTGGTTTGGCTCTTTGGGTTTTGTTTGTTTGT  498

seq1  TTGCTTTGGTTTGGTTTTTTTGAGACAGGGTTTCTCTGTGGAGTCCTGGC  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGGTTTGGTTTTTTTGAGACAGGGTTTCTCTGTGGAGTCCTGGC  548

seq1  TGTCTTGGAACTCACTCTGTAGATCAGGCTAGCCTGGAACTCAACAGAGA  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGGAACTCACTCTGTAGATCAGGCTAGCCTGGAACTCAACAGAGA  598

seq1  TGTGCCTCCTGAGTGCTGGGATTAGTGGCGTGTGCCATCAACCTGTCTTG  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTCCTGAGTGCTGGGATTAGTGGCGTGTGCCATCAACCTGTCTTG  648

seq1  TGTTTTATATTCCTATTTTGATTTCTGTAAGCATCTTAAATAGATTTACG  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTATATTCCTATTTTGATTTCTGTAAGCATCTTAAATAGATTTACG  698

seq1  CTTTTAGGGTGATGATAGCTATTTTCTCTAAGGCCTGGGTTCGCCTAGTT  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGGGTGATGATAGCTATTTTCTCTAAGGCCTGGGTTCGCCTAGTT  748

seq1  CACTGCTTTTTGTTTCTCTGGTCCCTTGCTCTCTCTGGGTGTTCTGTGGC  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTTTTTGTTTCTCTGGTCCCTTGCTCTCTCTGGGTGTTCTGTGGC  798

seq1  CATCTTCATCTACTCAGTCCCCAGAGCAGCCTGGAACATCTGCTCTGAAG  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTCATCTACTCAGTCCCCAGAGCAGCCTGGAACATCTGCTCTGAAG  848

seq1  AGCGGAAAGGAGCAGGTGTGCTTTTGCTTCAGTGCAAGTGACCCAGGACA  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGAAAGGAGCAGGTGTGCTTTTGCTTCAGTGCAAGTGACCCAGGACA  898

seq1  ACTTGAAGTCAGTGTCTGGCTTGTTCCCAGGCCACCCGGGTAGTTAGCCC  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAGTCAGTGTCTGGCTTGTTCCCAGGCCACCCGGGTAGTTAGCCC  948

seq1  ATTTGAGAGTCAGCCTTAGGTGGTCAGCTCTTCTAGGAGAGTTAGTTACA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAGAGTCAGCCTTAGGTGGTCAGCTCTTCTAGGAGAGTTAGTTACA  998

seq1  TTAAAACTCATGATTTCTTTGTCTCCTTTTGCCAGTAGGAGGGGGTTTTG  1037
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACTCATGATTTCTTTGTCTCCTTTTGCCAGTAGGAGGGGGTTTTG  1048

seq1  TTTTGTTGAAATTCACTGTTTCTCTTAAGATGTATCCCATTAAAATTATG  1087
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTGAAATTCACTGTTTCTCTTAAGATGTATCCCATTAAAATTATG  1098

seq1  GGTTTACGAAAAACAGTTGGATTCTGATGATCTGCTTTCTCGTGCATTAA  1137
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTACGAAAAACAGTTGGATTCTGATGATCTGCTTTCTCGTGCATTAA  1148

seq1  TTTCCAGTTTTTCACAGTGGGAGGAGAATTC  1168
      |||||||||||||||||||||||||||||||
seq2  TTTCCAGTTTTTCACAGTGGGAGGAGAATTC  1179