BAC Information

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BAC

Clone NameB6Ng01-237K22
Chromosome4 (Build37)
Map Location 108,583,458 - 108,690,108
singlet/doubletdoublet
Overlap geneRab3b, Nrd1
Upstream geneCpt2, Slc1a7, Podn, Scp2, Echdc2, Zyg11a, Zyg11b, LOC100040252, 2010305A19Rik, LOC545667, Gpx7, LOC665728, Zcchc11, LOC100040110, Prpf38a, Orc1l, Cc2d1b, Zfyve9, LOC100040326, 3110021N24Rik, Btf3l4, Txndc12, Kti12
Downstream geneOsbpl9, Calr4, Eps15, LOC666144, 4922503N01Rik, Rnf11, 4930522H14Rik, Cdkn2c, LOC100040307, Faf1, Dmrta2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237K22.bB6Ng01-237K22.g
ACCGA048574GA048575
length5951,013
definitionB6Ng01-237K22.b B6Ng01-237K22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,689,509 - 108,690,108)(108,583,458 - 108,584,477)
sequence
tgcagaactaacacatctgggtaggatgaagggctctaagcaatttaaaa
tgtttacgctgagtaactcagttacaagacactcaagacttctcagtgtg
ctactcagaaagtttaatactaatatggggtggggatgggggtaagataa
ccatttaggaaaatatttaataaaatagtaagtaaatggttaaaagagaa
aacttgctattaaaaagctacagcaataggatttaagaggctctttagtt
cttccttttgcattgaacacacacatataaatcatgtattacttatcaat
gtgcatttgccaaattccttgggaaaattcatttttaacaaaaatagatg
gccaagatatacacaaaattctgtttttaatgactaacacatactatcat
cattagttaaaattttggggtttttttttttaagtaaacgaaatagtaaa
tttgaaaacaggaaagtatatattaacttttccaactttgtattaatttt
cataactagtgcatttgtgaagctctgtttgataaggttgtccttataac
atagcatgcaccttgggtttctaaaagagccatacagccttcact
gaattcaacgcccttgcctgtaattcagtagtgacaagggactgtggtgc
tcaaaagaacactgactttggagtctattctcgattgcagtgataaacac
catgaccaaatgcaacttgaggggaaagaacttatttgtcttacaggctc
agtccatcactgagggaaaccaaggcaggaagtgaagcaggggaggaacc
tggaggcaggaactgaagcagagatcatggaagagtgctgctcactggcc
tgctccccgtggcttgttttgcttgctttcctatataacccagaaccacc
tgtccaggggtagagctgaccacagtgagctgggtgctcacacatcagtt
atcaattgagaaaagtcccccacaggtttacacacaggccaatctgatgg
aggcaattcttcaactgaggtttcctcttccaaggtaaatccagtttgag
tcaagttgacaaaaaccaaccagcacagagtcaggacatttgaatatgag
taccagacaaaacagaaagtacttccatggggctgaaacactgggtcaag
attgaagagccttggctgctcttccagaggacctggcttcggttaactac
ccacatggtagctaacaaccatctctaagttcagtcccaaggaatctgat
ggcatcctcctgtctatgagggcacggaaggcacatggtgcacagataga
ccttccaacacttaaacacataaaataaaaataaaacctcaaaaaattac
ttagtagctatgaggtcctgagaaagttatcaaatgtctgtctcagttta
tctgcataataaagagcctgacggttggataggtatggctcccatagcct
catgtgtttgaatgcttcgcctttagggagtggcactattaagagttgtg
ggccttgttgaggggaagtgtggcactgtggagtgggctgaaactatgcc
ctgtgtgaagatagtttctcctggctgtcatcaatcagatgtaaatcgat
agagagagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_108689509_108690108
seq2: B6Ng01-237K22.b_33_633 (reverse)

seq1  AGTG-AGGCTGTTTGGCTCTTTTAGAAACCCAAGGTGCATGCTATGTTAT  49
      |||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGGCTGTATGGCTCTTTTAGAAACCCAAGGTGCATGCTATGTTAT  50

seq1  AAGGACAACCTTATCAAACAGTGCTTCACAAATGCACTAGTTCTGAAAAT  99
      ||||||||||||||||||||| |||||||||||||||||||| |||||||
seq2  AAGGACAACCTTATCAAACAGAGCTTCACAAATGCACTAGTTATGAAAAT  100

seq1  TAATACAAAGTTGGAAAAGTTAATATATACTTTCCTGTTTTCAAATTTAC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATACAAAGTTGGAAAAGTTAATATATACTTTCCTGTTTTCAAATTTAC  150

seq1  TATTTCGTTTACTTAAAAAAAAAAACCCCAAAATTTTAACTAATGATGAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCGTTTACTTAAAAAAAAAAACCCCAAAATTTTAACTAATGATGAT  200

seq1  AGTATGTGTTAGTCATTAAAAACAGAATTTTGTGTATATCTTGGCCATCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTGTTAGTCATTAAAAACAGAATTTTGTGTATATCTTGGCCATCT  250

seq1  ATTTTTGTTAAAAATGAATTTTCCCAAGGAATTTGGCAAATGCACATTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTAAAAATGAATTTTCCCAAGGAATTTGGCAAATGCACATTGA  300

seq1  TAAGTAATACATGATTTATATGTGTGTGTTCAATGCAAAAGGAAGAACTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAATACATGATTTATATGTGTGTGTTCAATGCAAAAGGAAGAACTA  350

seq1  AAGAGCCTCTTAAATCCTATTGCTGTAGCTTTTTAATAGCAAGTTTTCTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCTCTTAAATCCTATTGCTGTAGCTTTTTAATAGCAAGTTTTCTC  400

seq1  TTTTAACCATTTACTTACTATTTTATTAAATATTTTCCTAAATGGTTATC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAACCATTTACTTACTATTTTATTAAATATTTTCCTAAATGGTTATC  450

seq1  TTACCCCCATCCCCACCCCATATTAGTATTAAACTTTCTGAGTAGCACAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCCCATCCCCACCCCATATTAGTATTAAACTTTCTGAGTAGCACAC  500

seq1  TGAGAAGTCTTGAGTGTCTTGTAACTGAGTTACTCAGCGTAAACATTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTCTTGAGTGTCTTGTAACTGAGTTACTCAGCGTAAACATTTTA  550

seq1  AATTGCTTAGAGCCCTTCATCCTACCCAGATGTGTTAGTTCTGCAGAATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTTAGAGCCCTTCATCCTACCCAGATGTGTTAGTTCTGCAGAATT  600

seq1  C  600
      |
seq2  C  601

seq1: chr4_108583458_108584477
seq2: B6Ng01-237K22.g_63_1075

seq1  GAATTCAACGCCCTTGCCTGTAATTCAGTAGTGACAAGGGACTGTGGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACGCCCTTGCCTGTAATTCAGTAGTGACAAGGGACTGTGGTGC  50

seq1  TCAAAAGAACACTGACTTTGGAGTCTATTCTCGATTGCAGTGATAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGAACACTGACTTTGGAGTCTATTCTCGATTGCAGTGATAAACAC  100

seq1  CATGACCAAATGCAACTTGAGGGGAAAGAACTTATTTGTCTTACAGGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACCAAATGCAACTTGAGGGGAAAGAACTTATTTGTCTTACAGGCTC  150

seq1  AGTCCATCACTGAGGGAAACCAAGGCAGGAAGTGAAGCAGGGGAGGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATCACTGAGGGAAACCAAGGCAGGAAGTGAAGCAGGGGAGGAACC  200

seq1  TGGAGGCAGGAACTGAAGCAGAGATCATGGAAGAGTGCTGCTCACTGGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCAGGAACTGAAGCAGAGATCATGGAAGAGTGCTGCTCACTGGCC  250

seq1  TGCTCCCCGTGGCTTGTTTTGCTTGCTTTCCTATATAACCCAGAACCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCCCGTGGCTTGTTTTGCTTGCTTTCCTATATAACCCAGAACCACC  300

seq1  TGTCCAGGGGTAGAGCTGACCACAGTGAGCTGGGTGCTCACACATCAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGGGTAGAGCTGACCACAGTGAGCTGGGTGCTCACACATCAGTT  350

seq1  ATCAATTGAGAAAAGTCCCCCACAGGTTTACACACAGGCCAATCTGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATTGAGAAAAGTCCCCCACAGGTTTACACACAGGCCAATCTGATGG  400

seq1  AGGCAATTCTTCAACTGAGGTTTCCTCTTCCAAGGTAAATCCAGTTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATTCTTCAACTGAGGTTTCCTCTTCCAAGGTAAATCCAGTTTGAG  450

seq1  TCAAGTTGACAAAAACCAACCAGCACAGAGTCAGGACATTTGAATATGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGTTGACAAAAACCAACCAGCACAGAGTCAGGACATTTGAATATGAG  500

seq1  TACCAGACAAAACAGAAAGTACTTCCATGGGGCTGAAACACTGGGTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGACAAAACAGAAAGTACTTCCATGGGGCTGAAACACTGGGTCAAG  550

seq1  ATTGAAGAGCCTTGGCTGCTCTTCCAGAGGACCTGGCTTCGGTTAACTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGAGCCTTGGCTGCTCTTCCAGAGGACCTGGCTTCGGTTAACTAC  600

seq1  CCACATGGTAGCTAACAACCATCTCTAAGTTCAGTCCCAAGGAATCTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGGTAGCTAACAACCATCTCTAAGTTCAGTCCCAAGGAATCTGAT  650

seq1  GGCATCCTCCTGTCTATGAGGGCACGGAAGGCACATGGTGCACAGATAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCCTCCTGTCTATGAGGGCACGGAAGGCACATGGTGCACAGATAGA  700

seq1  CCTTCCAACACTTAAACACATAAAATAAAAATAAAACCTCAAAAAATTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCAACACTTAAACACATAAAATAAAAATAAAACCTCAAAAAATTAC  750

seq1  TTAGTAGCTATGAGGTCCTGAGAAAGTTATCAAATGTCTGTCTCAGTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGCTATGAGGTCCTGAGAAAGTTATCAAATGTCTGTCTCAGTTTA  800

seq1  TCTGCATAATAAAGAGCCTGACGGTTGGATAGGTATGGCTCCCATAGCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATAATAAAGAGCCTGACGGTTGGATAGGTATGGCTCCCATAGCCT  850

seq1  CATGTGTTTGAATGCTTCGCCTTTAGGGAGTGGCACTATTAAGAGTTGT-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CATGTGTTTGAATGCTTCGCCTTTAGGGAGTGGCACTATTAAGAGTTGTG  900

seq1  GGCCTTGTTGAGGGGAAGTGTGGCACTGTGGAGGTGGGCTGAAACTATGC  949
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGCCTTGTTGAGGGGAAGTGTGGCACTGTGGA-GTGGGCTGAAACTATGC  949

seq1  CCTGTGTGGAAGATAGTTTCCTCCTGGCTGTCATCAAATCAAGATGTAAA  999
      ||||||| ||||||||||| ||||||||||||||| |||| |||||| ||
seq2  CCTGTGT-GAAGATAGTTT-CTCCTGGCTGTCATC-AATC-AGATGT-AA  994

seq1  ATCGATAGAGAAGGAGGGAGG  1020
      |||||||||||  ||||||||
seq2  ATCGATAGAGA--GAGGGAGG  1013