BAC Information

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BAC

Clone NameB6Ng01-246M10
Chromosome4 (Build37)
Map Location 30,411,443 - 30,589,054
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665185
Downstream geneLOC619906, LOC100040864, LOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246M10.bB6Ng01-246M10.g
ACCGA055297GA055298
length1,0171,122
definitionB6Ng01-246M10.b B6Ng01-246M10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,588,481 - 30,589,054)(30,411,443 - 30,412,566)
sequence
gaattccatctagtctccagcttctcaattttccatcagttttcacatca
ccataatgagaagcccattacaaaacacagcagcttagaaaatatcctaa
atgttcatgtagtgtcttgaacaaactattttaagtgcacaatttagtgt
tgtagaactgatagaatctctaaagactttttaccttacttctttttgtc
aaaaaaacagcaggatgtcaagttttatatgtatgttctgaggctcagtg
attaaactagaatgggtagtgcctagttcctgttctattagtatgttaaa
acatcatgaccaaagcaacttataaaagaaagcatttaagttggcttata
gttttcgagggttatcctttatggtggcaaagtgattgaacagttgaggg
ctcataccctgatctcacagagaaaacatgcttggaaagaagtgaggttt
ttgaattctcaaagcatgtccctagtgatacacctactttaacaaggcca
cacctcttaatctttcccaaatagttctaccagctggggaccaaatattt
aaataaatgaggtcatggtgccatctcattcaaaccactatagctattca
gaatccccagaaacctgtcaatctctgaacccctatattttggactaaaa
gtacaagccacctcacccagcctttttgaatgaattttaataacttgtgt
gtacatgtatttgtgtgtgcgcatgtgtgtgttatgtgtgtgctgtttat
attccatatgtatgttgatattcagaagttgttgttcaattacttttttt
aaagttgtctacatattttatttattttatttttttccctttaaatattt
ttattaggtattttcctcatttacatttccaatgctataccaaaagtcct
ccatactctcacccccactcccctacccaacaaactcccaccttttggcc
ctggcgttcccctgtgctggggcaatataaaagtttgcatgaccaatggg
cctcctcttttccagtg

gaattccaggatcatggtaaagatctataatttcaatgcttgggaaataa
ggcaagaggatccaagtcatcctccacttgatagtggactgaagccactg
tagcctttatgagatcttgtccaataaaaaacagaataggtgtgagatgg
gtcatccagaatgatggctgctacagagtggtaacctgtgttctagttct
aggacctatatagtggaaagagaacagactacttcagcttatctgatttc
tacatatacaccaaaacatttctgcatatacttgataacatctatacctg
aacacatacacatacacacgatgaatgaatataattgtatagagatcttc
aaaagcataaaaaaatggagaatttaatactcattgataatttgacttga
gattaatggcatttgaaatactgcagtgtttgggtgtttcctctttgggt
ttcataagataagacagcaacctgagctttgacacatcatgtgtttgaga
aactatctgaattaaaacctgcaaaatagagtttccaaaatacagctttg
ttaagaaagaaatttgcactgtttattgtctataggcttgtccataaacc
agctcttcatgttctttctgaatactttattcatctctgctgttttcctc
attaaaacaatcttttattaaatttttattagatattttcttcattcaca
tttcaaatgctattcagaaattcaagaatggactagaacaatgtggtgag
tcttaacacaactgcccctgtcactataaacagaaaggtagtgtttgtcc
attttagtttctgaacaaggaattcagtctttggggtaaacaatgtttct
tcaggtaatgtctttcctagatgtcttaattactaatccaaatacagaat
tcctagcttagtgaaattaatttagtagtaacagaaaatacaaattcaag
agagattttgtactaagtcacttctagcatgttggacatatatttatttt
agaacaaagtctacagatacaaatattcagcattataaattaatagaact
aacttttttgttggaaagatggggagtagaaggtttggacagtgttatag
ttataaggtgaatagtataaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30588481_30589054
seq2: B6Ng01-246M10.b_44_617 (reverse)

seq1  ATGGCACCATGACCTCATTTATTTAAATATTTGGTCCCCAGCTGGTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCACCATGACCTCATTTATTTAAATATTTGGTCCCCAGCTGGTAGAA  50

seq1  CTATTTGGGAAAGATTAAGAGGTGTGGCCTTGTTAAAGTAGGTGTATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGGGAAAGATTAAGAGGTGTGGCCTTGTTAAAGTAGGTGTATCAC  100

seq1  TAGGGACATGCTTTGAGAATTCAAAAACCTCACTTCTTTCCAAGCATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGACATGCTTTGAGAATTCAAAAACCTCACTTCTTTCCAAGCATGTT  150

seq1  TTCTCTGTGAGATCAGGGTATGAGCCCTCAACTGTTCAATCACTTTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTGAGATCAGGGTATGAGCCCTCAACTGTTCAATCACTTTGCCA  200

seq1  CCATAAAGGATAACCCTCGAAAACTATAAGCCAACTTAAATGCTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAGGATAACCCTCGAAAACTATAAGCCAACTTAAATGCTTTCTTT  250

seq1  TATAAGTTGCTTTGGTCATGATGTTTTAACATACTAATAGAACAGGAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTTGCTTTGGTCATGATGTTTTAACATACTAATAGAACAGGAACT  300

seq1  AGGCACTACCCATTCTAGTTTAATCACTGAGCCTCAGAACATACATATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTACCCATTCTAGTTTAATCACTGAGCCTCAGAACATACATATAA  350

seq1  AACTTGACATCCTGCTGTTTTTTTGACAAAAAGAAGTAAGGTAAAAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGACATCCTGCTGTTTTTTTGACAAAAAGAAGTAAGGTAAAAAGTC  400

seq1  TTTAGAGATTCTATCAGTTCTACAACACTAAATTGTGCACTTAAAATAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGATTCTATCAGTTCTACAACACTAAATTGTGCACTTAAAATAGT  450

seq1  TTGTTCAAGACACTACATGAACATTTAGGATATTTTCTAAGCTGCTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCAAGACACTACATGAACATTTAGGATATTTTCTAAGCTGCTGTGT  500

seq1  TTTGTAATGGGCTTCTCATTATGGTGATGTGAAAACTGATGGAAAATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATGGGCTTCTCATTATGGTGATGTGAAAACTGATGGAAAATTGA  550

seq1  GAAGCTGGAGACTAGATGGAATTC  574
      ||||||||||||||||||||||||
seq2  GAAGCTGGAGACTAGATGGAATTC  574


seq1: chr4_30411443_30412566
seq2: B6Ng01-246M10.g_65_1186

seq1  GAATTCCAGGATCATGGTAAAGATCTATAATTTCAATGCTTGGGAAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGATCATGGTAAAGATCTATAATTTCAATGCTTGGGAAATAA  50

seq1  GGCAAGAGGATCCAAGTCATCCTCCACTTGATAGTGGACTGAAGCCACTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAGGATCCAAGTCATCCTCCACTTGATAGTGGACTGAAGCCACTG  100

seq1  TAGCCTTTATGAGATCTTGTCCAATAAAAAACAGAATAGGTGTGAGATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTTTATGAGATCTTGTCCAATAAAAAACAGAATAGGTGTGAGATGG  150

seq1  GTCATCCAGAATGATGGCTGCTACAGAGTGGTAACCTGTGTTCTAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCAGAATGATGGCTGCTACAGAGTGGTAACCTGTGTTCTAGTTCT  200

seq1  AGGACCTATATAGTGGAAAGAGAACAGACTACTTCAGCTTATCTGATTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCTATATAGTGGAAAGAGAACAGACTACTTCAGCTTATCTGATTTC  250

seq1  TACATATACACCAAAACATTTCTGCATATACTTGATAACATCTATACCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATACACCAAAACATTTCTGCATATACTTGATAACATCTATACCTG  300

seq1  AACACATACACATACACACGATGAATGAATATAATTGTATAGAGATCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATACACATACACACGATGAATGAATATAATTGTATAGAGATCTTC  350

seq1  AAAAGCATAAAAAAATGGAGAATTTAATACTCATTGATAATTTGACTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCATAAAAAAATGGAGAATTTAATACTCATTGATAATTTGACTTGA  400

seq1  GATTAATGGCATTTGAAATACTGCAGTGTTTGGGTGTTTCCTCTTTGGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATGGCATTTGAAATACTGCAGTGTTTGGGTGTTTCCTCTTTGGGT  450

seq1  TTCATAAGATAAGACAGCAACCTGAGCTTTGACACATCATGTGTTTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAGATAAGACAGCAACCTGAGCTTTGACACATCATGTGTTTGAGA  500

seq1  AACTATCTGAATTAAAACCTGCAAAATAGAGTTTCCAAAATACAGCTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCTGAATTAAAACCTGCAAAATAGAGTTTCCAAAATACAGCTTTG  550

seq1  TTAAGAAAGAAATTTGCACTGTTTATTGTCTATAGGCTTGTCCATAAACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAAGAAATTTGCACTGTTTATTGTCTATAGGCTTGTCCATAAACC  600

seq1  AGCTCTTCATGTTCTTTCTGAATACTTTATTCATCTCTGCTGTTTTCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTTCATGTTCTTTCTGAATACTTTATTCATCTCTGCTGTTTTCCTC  650

seq1  ATTAAAACAATCTTTTATTAAATTTTTATTAGATATTTTCTTCATTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACAATCTTTTATTAAATTTTTATTAGATATTTTCTTCATTCACA  700

seq1  TTTCAAATGCTATTCAGAAATTCAAGAATGGACTAGAACAATGTGGTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATGCTATTCAGAAATTCAAGAATGGACTAGAACAATGTGGTGAG  750

seq1  TCTTAACACAACTGCCCCTGTCACTATAAACAGAAAGGTAGTGTTTGTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACACAACTGCCCCTGTCACTATAAACAGAAAGGTAGTGTTTGTCC  800

seq1  ATTTTAGTTTCTGAACAAGGAATTCAGTCTTTGGGGTAAACAATGTTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTTTCTGAACAAGGAATTCAGTCTTTGGGGTAAACAATGTTTCT  850

seq1  TCAGGTAATGTCTTTCCTAGATGTCTTAATTACTAATCCAAATACAGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTAATGTCTTTCCTAGATGTCTTAATTACTAATCCAAATACAGAAT  900

seq1  TCCTAGCTTAGGTGAAATTAATTTAGTAGTAACAGAAAATACAAATTCAA  950
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCTTA-GTGAAATTAATTTAGTAGTAACAGAAAATACAAATTCAA  949

seq1  GAGAGATTTTGTACTAAGTCACTTCTAGCATGTTGGACAATATATTTATT  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAGAGATTTTGTACTAAGTCACTTCTAGCATGTTGGAC-ATATATTTATT  998

seq1  TTAGAAACAAAGTCTACAGATACAAATATTCAGCATTTATAAATAAATAA  1050
      |||| |||||||||||||||||||||||||||||| |||||||| ||| |
seq2  TTAG-AACAAAGTCTACAGATACAAATATTCAGCA-TTATAAATTAAT-A  1045

seq1  GAAACTACATTTTGTTTGGAGAGATGGGGAGTAG-AGGTTTTGACAGTG-  1098
      |||   || ||||  ||||| ||||||||||||| |||||| ||||||| 
seq2  GAACTAACTTTTTTGTTGGAAAGATGGGGAGTAGAAGGTTTGGACAGTGT  1095

seq1  TATAG-TATTAAGTGATAAGTATAAAT  1124
      ||||| ||| | ||||  |||||||||
seq2  TATAGTTATAAGGTGAATAGTATAAAT  1122


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