BAC Information

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BAC

Clone NameB6Ng01-247O06
Chromosome15 (Build37)4 (Build37)
Map Location 65,248,663 - 65,249,856141,589,007 - 141,589,089
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAdcy8, LOC268812, LOC100040790, LOC665836
Downstream geneC920006C10Rik, Oc90, F930104E18Rik, LOC100040835, Kcnq3, Lrrc6, LOC100040860
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-247O06.bB6Ng01-247O06.g
ACCGA056110GA056111
length1,188741
definitionB6Ng01-247O06.b B6Ng01-247O06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(65,248,663 - 65,249,856)(141,589,007 - 141,589,089)
sequence
gaattcacctctgttcttccttccatctgctggtatgctctcatccattt
tgttagtatttaattatcctccaaagatagctcatggtacatcatccatg
aatctctaatcctaacagtatctaccttgagccttgagattgaagatggt
ctaataccaaacatatgattgtcatctgtggaaaggaagggaacaaaagg
gaagtaccaggtgttttttaaccaagactgacacacccaggcataaattt
ccctatgtacaagtgggactaatcaccaaaccctgcactgatacgatttg
actatacttcaagcagccccatttactaatttaaattaagactcacacac
aggtggcatttcccttgccttctatacactcttggaatttgctttaatta
tagcgggtagaattctgctcagaggtgatctgattttcaaccactctgtg
tttcaggagactggagacttcgtcttactaatccctctggagcatcaagt
aaagtatctagttcagaggaaaccctgagagacacttagcaagtcagtga
aatgtgaggactggggaaatctctgactaactgtaatactcactcaatgt
gtgactcacacccttaatatcttgtctttcatctatttattttcagttat
ctaaaccaccctggggctctatttcctctgttgtaaaatgggaataatta
tccttcctcttattatctctctagaagtgaatgacataatgtaataaagg
tacttcacaaaatttaaaaaaaaagacaattttaaaacctctatggcatg
gtggtgatcaagtgttggaaatacacaaatggacactccgcatggtggat
tttctagagcagcaacatctaagtagagttcacaagatgaaattttcacc
atcgaatccctaaaaagaaaagggaagaaacaagatgatatgggtagttc
agtttagggatgaaaacaaacattgtatattattttattttacagtaatg
aagtttattaagtgaattactcagattctcccacatggagtgacatcact
cacatctgagagatgagaaattgagcaatttctccaattcttcatcatca
agagaattctatggagcttgaacttagatgataaaccatcttccactgca
tagccaataaaaaaacaggttaagaaaaacatttccac
gaattccattgactcgaaaattctaggctgaggcttttcttaatcacaca
cacacgcagtgagagacagagacacagagacagagacacagagagagaca
cagaaagagacaaatttggaactcacagttcaaattactcccgtcagagc
tcagggaatcctggagaagaggagatggaaagagtataaaagccaaagga
ggggctggatagatggctcagcagttaagagcattgactgctcttccaga
ggtcctgagttcaattcccagcaaccacatggtggctcacagccatctgt
agtggaatctgatgcctttttttctggtgtgtctgaagatagtttactcc
tatacataaaaaataaatgatttaaaaaaaacaaaggtcagaggagatgg
aggataccaggaacacatgttctttaaatcaactgagtaaagctcacaga
actcacagagtctgaagcagcaagcacagagcctatatgggtctgtacca
agtccttctaatatatactatagctctcagcttgatctctttatggaact
cctgagtgtgtgaatgagtctgattctaatgccttcttttgggctcttct
gctagtttgtcttgtccaacttcaatatgatagttttatgttatcttatt
atattttattttgttatgttttgttgctatctcttgcttggaagcctgtt
cttttctactggggggggtgggggtgagatttcagatggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_65248663_65249856
seq2: B6Ng01-247O06.b_45_1232

seq1  GAATTCACCTCTGTTCTTCCTTCCATCTGCTGGTATGCTCTCATCCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTCTGTTCTTCCTTCCATCTGCTGGTATGCTCTCATCCATTT  50

seq1  TGTTAGTATTTAATTATCCTCCAAAGATAGCTCATGGTACATCATCCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTATTTAATTATCCTCCAAAGATAGCTCATGGTACATCATCCATG  100

seq1  AATCTCTAATCCTAACAGTATCTACCTTGAGCCTTGAGATTGAAGATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTAATCCTAACAGTATCTACCTTGAGCCTTGAGATTGAAGATGGT  150

seq1  CTAATACCAAACATATGATTGTCATCTGTGGAAAGGAAGGGAACAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATACCAAACATATGATTGTCATCTGTGGAAAGGAAGGGAACAAAAGG  200

seq1  GAAGTACCAGGTGTTTTTTAACCAAGACTGACACACCCAGGCATAAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTACCAGGTGTTTTTTAACCAAGACTGACACACCCAGGCATAAATTT  250

seq1  CCCTATGTACAAGTGGGACTAATCACCAAACCCTGCACTGATACGATTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATGTACAAGTGGGACTAATCACCAAACCCTGCACTGATACGATTTG  300

seq1  ACTATACTTCAAGCAGCCCCATTTACTAATTTAAATTAAGACTCACACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATACTTCAAGCAGCCCCATTTACTAATTTAAATTAAGACTCACACAC  350

seq1  AGGTGGCATTTCCCTTGCCTTCTATACACTCTTGGAATTTGCTTTAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGCATTTCCCTTGCCTTCTATACACTCTTGGAATTTGCTTTAATTA  400

seq1  TAGCGGGTAGAATTCTGCTCAGAGGTGATCTGATTTTCAACCACTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCGGGTAGAATTCTGCTCAGAGGTGATCTGATTTTCAACCACTCTGTG  450

seq1  TTTCAGGAGACTGGAGACTTCGTCTTACTAATCCCTCTGGAGCATCAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGGAGACTGGAGACTTCGTCTTACTAATCCCTCTGGAGCATCAAGT  500

seq1  AAAGTATCTAGTTCAGAGGAAACCCTGAGAGACACTTAGCAAGTCAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATCTAGTTCAGAGGAAACCCTGAGAGACACTTAGCAAGTCAGTGA  550

seq1  AATGTGAGGACTGGGGAAATCTCTGACTAACTGTAATACTCACTCAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGAGGACTGGGGAAATCTCTGACTAACTGTAATACTCACTCAATGT  600

seq1  GTGACTCACACCCTTAATATCTTGTCTTTCATCTATTTATTTTCAGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCACACCCTTAATATCTTGTCTTTCATCTATTTATTTTCAGTTAT  650

seq1  CTAAACCACCCTGGGGCTCTATTTCCTCTGTTGTAAAATGGGAATAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCACCCTGGGGCTCTATTTCCTCTGTTGTAAAATGGGAATAATTA  700

seq1  TCCTTCCTCTTATTATCTCTCTAGAAGTGAATGACATAATGTAATAAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTCTTATTATCTCTCTAGAAGTGAATGACATAATGTAATAAAGG  750

seq1  TACTTCACAAAATTTAAAAAAAAAGACAATTTTAAAACCTCTATGGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCACAAAATTTAAAAAAAAAGACAATTTTAAAACCTCTATGGCATG  800

seq1  GTGGTGATCAAGTGTTGGAAATACACAAATGGACACTCCGCATGGTGGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGATCAAGTGTTGGAAATACACAAATGGACACTCCGCATGGTGGAT  850

seq1  TTTCTAGAGCAGCAACATCTAAGTAGAGTTCACAAGATGAAATTTTCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGAGCAGCAACATCTAAGTAGAGTTCACAAGATGAAATTTTCACC  900

seq1  ATCGAATCCCTAAAAAGAAAAGGGAAGAAAACAAGATGATAT-GGTAGTT  949
      ||||||||||||||||||||||||||| |||||||||||||| |||||||
seq2  ATCGAATCCCTAAAAAGAAAAGGGAAG-AAACAAGATGATATGGGTAGTT  949

seq1  CAGTTTAGGGATGAAAACAAACATTGTTATATTATTTTATTTTTACAGTA  999
      |||||||||||||||||||||||||| |||||||||||| ||||||||||
seq2  CAGTTTAGGGATGAAAACAAACATTG-TATATTATTTTA-TTTTACAGTA  997

seq1  ATGAAGTTTATTAAGTGGAATTACTCCAGATTCTCCCACATGGAGTGACA  1049
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  ATGAAGTTTATTAAGT-GAATTACT-CAGATTCTCCCACATGGAGTGACA  1045

seq1  TCACTCACATCTGAGAGATGAGAAA-TGAGCAAATTCTCCAA-TCTTCAT  1097
      ||||||||||||||||||||||||| ||||||| |||||||| |||||||
seq2  TCACTCACATCTGAGAGATGAGAAATTGAGCAATTTCTCCAATTCTTCAT  1095

seq1  CAACCAGAGAATTCTATTGAGCCTGAAC-TAGATGATAAAACAATCTCCA  1146
      || | |||||||||||| |||| ||||| ||||||||||| ||   ||||
seq2  CATCAAGAGAATTCTATGGAGCTTGAACTTAGATGATAAACCATCTTCCA  1145

seq1  CTGCCCAATAGCACATTAAAAAAAAAACAGGTTAAG-AAAACA-TTCCAC  1194
      ||||   |||||     || |||||||||||||||| |||||| ||||||
seq2  CTGC---ATAGC----CAATAAAAAAACAGGTTAAGAAAAACATTTCCAC  1188

seq1: chr4_141589007_141589089
seq2: B6Ng01-247O06.g_275_357 (reverse)

seq1  TGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCAGGACCTTTGAAGGA  50
      |||||||||||||||||||||||||| ||||||||||||||| || | ||
seq2  TGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCTCTGGAAGA  50

seq1  GCAGTCAGTGCTCTTACCCGCTGAGCCATCTCT  83
      ||||||| |||||||| | |||||||||||| |
seq2  GCAGTCAATGCTCTTAACTGCTGAGCCATCTAT  83