BAC Information

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BAC

Clone NameB6Ng01-250F01
Chromosome4 (Build37)
Map Location 29,000,360 - 29,001,441
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040842, LOC100040735, LOC230044, LOC665141, LOC100040773, Epha7
Downstream geneLOC100040907, LOC100040811
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250F01.bB6Ng01-250F01.g
ACCGA057895GA057896
length1,2291,080
definitionB6Ng01-250F01.b B6Ng01-250F01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagcagagaaattcctagtggttataaagagaaacacttaaat
aaatgttcatcattgttagtaattagagaaatgcaaacgactctgattga
tactctatctgatattcatcagaataaacaagatctaaagctcatgtgac
agcacatgttggtgagcaaagggaacacttcaccattgctgatgggagtg
caaacgtatacaactactttcaaaatcaacctggtggtttctcagaaaat
tgggaataattctacctcaagacccagctataccactcctgggaataata
tccaaaagatgatccaccatactataaggatatttgctcaactatcttca
tagcaactttattcataatagccagaaactggaaacagcttagacgatgg
tcctcaactgaagaatgagtaaagaaactatggtacatttacacaatgca
ttaataccccaaaaaaaaaagacattatgacatccattgcaggcaaatgg
atggaactggaaactatcgtcctgaatgaggtaatatagacccaagtaag
acattcatgatatgtactcatttatctagatattagccctaaagtacagg
ataaccatgctacaatctacaaacccaaagaagctaattaaaagaaaaga
tccgagagaaaatgcttgaatctcactcagaaaggaatataaaataagca
tcagaggtgcgtggagggagagaactaggtaggaaacagagaaaggggat
tgggatgtggatcaagtgtggagaagtcttacacgcgttctcgcgaccgg
ccaggaagacgcaacaaaccgggaatcttctgcgggcaaaagctttattg
cttacatctttcaggagcaagagcaagagagcaagagagcaaggagagag
aatgggcgaaaccccgtccctttttaaggaagaattatcctcccacctag
gacgttgtcactcccttgaatgggctgcagcccaatcgggccgagttgtt
ggtcacggggaaggcaggagcacatgggagtggagaactacctcttggca
catggcacagaattattggcttaccacttaagaacacagggatgtcacgc
cccatcctggtaaccggcgaatggtgaggccggctccccacagctccccg
tacttactagaaggcaatgtcacccatttatggagagggggagatcgagg
tctactgcccaggtggtgccaggcatgag
gaattcatgagaaacattccatctatccaaaatcccaagttgtacaaata
ttaaaagtcccccccacacacacacaagatgcaacacatggatataacga
caaaaagtagaacactgcgtaatagcaattgcatcattctgctccacttt
gttggatctttctcaagaagctgtgctggctttatgactttccctgttcc
cattatctggctatgccagataccagtttttccaagtgaaatgtagctat
aaaagttacttggctaagtaattaataactggataagtggttatcccaga
gaaataaaacacttgatttctaagagccacttattcataaaaaagagatg
ttaatttttatgtccttactatttgttaagacatattcacagaattatgt
ttgagaaggcttagtagttgatggttaatgttagtaattggcaaaaatta
ttcttgaaatagttttaattttacaatatatctcccttatttccttctct
cctatctttgtacccattctcctagaggttcatggcctctttttcatcaa
ctgttattgcatgcatatatgtacgtatatacttatgtatttccagtgta
acctattgagtccatataatgttacataagtgtatgttttggagggctga
aagtttaaaactggaaaacatattaatgtgtttttccctggtgagcacaa
cctttcccaatcccaaattcccacagttggctatatttcttttattgtcc
tcaaagcttttaagaaacattgtccccattaaaaaatgggactcagagct
gaacaaagaattctcacctgagaaataccgaatggctgagaagcacctga
aaaaaggttcaacatccttaatcatcaggaaatgcaaatcaaaacaactc
ctgagattccacttcactccagtcagaatggctaagatcaaaaattcaag
tgacagcagatgctggcgtggatgtggagaaagaggaacacctcctccat
tgttggtgggattgcagcttgtacaccactctggaagtcagtctggtggt
tctcagaaattggaaaatagtactactgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_29000360_29001441
seq2: B6Ng01-250F01.g_69_1148 (reverse)

seq1  TCCAGTAGTACTATGTCCAATTTTCTGAGGAACCACCAGACTGACTTCCA  50
      |||||||||||||| | | | ||||||| |||||||||||||||||||||
seq2  TCCAGTAGTACTATTTTCCAATTTCTGA-GAACCACCAGACTGACTTCCA  49

seq1  GAGTGGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGA-GTGTTCCT  99
      |||||| ||||||||| |||||||||||||||||||||||| ||||||||
seq2  GAGTGG-TGTACAAGC-TGCAATCCCACCAACAATGGAGGAGGTGTTCCT  97

seq1  CTTTCTCCACATCCACGCCAGCATCTGCTGTCACCTGAATTTTTGATCTT  149
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTTTCTCCACATCCACGCCAGCATCTGCTGTCACTTGAATTTTTGATCTT  147

seq1  AGCCATTCTGACTGGAGTGAAGTGGAATCTCAGG-GTTGTTTTGATTTGC  198
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCCATTCTGACTGGAGTGAAGTGGAATCTCAGGAGTTGTTTTGATTTGC  197

seq1  ATTTCCCTGATGATTAAGGATGTTGAACCTTTTTTCAGGTGCTTCTCAGC  248
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTT-CCTGATGATTAAGGATGTTGAACCTTTTTTCAGGTGCTTCTCAGC  246

seq1  CATTCGGTATTTCTCAGGTGAGAATTCTTTGTTCAGCTCTGAGTCCCATT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGGTATTTCTCAGGTGAGAATTCTTTGTTCAGCTCTGAGTCCCATT  296

seq1  TTTTAATGGGGACAATGTTTCTTAAAAGCTTTGAGGACAATAAAAGAAAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGGGGACAATGTTTCTTAAAAGCTTTGAGGACAATAAAAGAAAT  346

seq1  ATAGCCAACTGTGGGAATTTGGGATTGGGAAAGGTTGTGCTCACCAGGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCAACTGTGGGAATTTGGGATTGGGAAAGGTTGTGCTCACCAGGGA  396

seq1  AAAACACATTAATATGTTTTCCAGTTTTAAACTTTCAGCCCTCCAAAACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACATTAATATGTTTTCCAGTTTTAAACTTTCAGCCCTCCAAAACA  446

seq1  TACACTTATGTAACATTATATGGACTCAATAGGTTACACTGGAAATACAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTTATGTAACATTATATGGACTCAATAGGTTACACTGGAAATACAT  496

seq1  AAGTATATACGTACATATATGCATGCAATAACAGTTGATGAAAAAGAGGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATACGTACATATATGCATGCAATAACAGTTGATGAAAAAGAGGC  546

seq1  CATGAACCTCTAGGAGAATGGGTACAAAGATAGGAGAGAAGGAAATAAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACCTCTAGGAGAATGGGTACAAAGATAGGAGAGAAGGAAATAAGG  596

seq1  GAGATATATTGTAAAATTAAAACTATTTCAAGAATAATTTTTGCCAATTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATATATTGTAAAATTAAAACTATTTCAAGAATAATTTTTGCCAATTA  646

seq1  CTAACATTAACCATCAACTACTAAGCCTTCTCAAACATAATTCTGTGAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATTAACCATCAACTACTAAGCCTTCTCAAACATAATTCTGTGAAT  696

seq1  ATGTCTTAACAAATAGTAAGGACATAAAAATTAACATCTCTTTTTTATGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTAACAAATAGTAAGGACATAAAAATTAACATCTCTTTTTTATGA  746

seq1  ATAAGTGGCTCTTAGAAATCAAGTGTTTTATTTCTCTGGGATAACCACTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGGCTCTTAGAAATCAAGTGTTTTATTTCTCTGGGATAACCACTT  796

seq1  ATCCAGTTATTAATTACTTAGCCAAGTAACTTTTATAGCTACATTTCACT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTTATTAATTACTTAGCCAAGTAACTTTTATAGCTACATTTCACT  846

seq1  TGGAAAAACTGGTATCTGGCATAGCCAGATAATGGGAACAGGGAAAGTCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAACTGGTATCTGGCATAGCCAGATAATGGGAACAGGGAAAGTCA  896

seq1  TAAAGCCAGCACAGCTTCTTGAGAAAGATCCAACAAAGTGGAGCAGAATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCAGCACAGCTTCTTGAGAAAGATCCAACAAAGTGGAGCAGAATG  946

seq1  ATGCAATTGCTATTACGCAGTGTTCTACTTTTTGTCGTTATATCCATGTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATTGCTATTACGCAGTGTTCTACTTTTTGTCGTTATATCCATGTG  996

seq1  TTGCATCTTGTGTGTGTGTGGGGGGGACTTTTAATATTTGTACAACTTGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATCTTGTGTGTGTGTGGGGGGGACTTTTAATATTTGTACAACTTGG  1046

seq1  GATTTTGGATAGATGGAATGTTTCTCATGAATTC  1082
      ||||||||||||||||||||||||||||||||||
seq2  GATTTTGGATAGATGGAATGTTTCTCATGAATTC  1080