BAC Information

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BAC

Clone NameB6Ng01-250M11
Chromosome4 (Build37)
Map Location 23,028,970 - 23,030,180
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040379, Fbxl4, Pou3f2, LOC664911, 1700025O08Rik
Downstream geneLOC625462, LOC383998, LOC100040464, LOC623873
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250M11.bB6Ng01-250M11.g
ACCGA058228GA058229
length1,2401,195
definitionB6Ng01-250M11.b B6Ng01-250M11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ggaattctctgtttagaactatatcccattttaaactggttatttgttct
tttgatatctagtttctggaactcttcctatattttgtatattggttctt
tatcaggtgtggaattggtgaaagtggtttcacaccctttaggctaccac
ttgtcctaaatgtgtcctttaccttacagtagctcctcaactccatcaga
tatcatttattaatctttgatcttacttccggtgatgataatgttttgtt
tagaaaatctaatcttgtgccaataagttgaaggctatttctcgctttct
ttactatcaggttcagggtaccttactaaatgtagagatctttgatccat
ttggagttgagatttgtgagtgaggttaagtatagatctacttacagtct
gctaagagcagccattcagttttgaacatgtctgttttccagtgcatatt
tctggactggaaaatctataggtatgtaggcttatggttgagtcttcaat
taaattccattgatcagtgtttttattttagtgccaatagcatgctgtat
ttactagtacagttctatagtataccttgaaattaaggaaggttacactt
acagaatttcttttattgttaaggattgctttagctattcagtttatttt
ttgtcatatgaagttcagttttggccacttaagatatttgaagaattata
tgaagaattatattggaattttaatgaggactgaatttgtagatcatttt
tggtagaatgaccatttttataatgttaatcctactgaaccatgagcttg
tcagatttttccatcttctgatatattcttcatttttctttttcaatgat
ttgaagattttatcacccaaagctttcacttaatttgttataaatacatc
aagatattttatattatttgagactattataaaaagtgttgtttcctggt
ttctttctcagccaatttcagccagtgttatttaggagaactagtaattt
ttttatttatttatttattttttattttggcggatcaccttagaatcaag
ctattttcaaaatgtttattctggcattagaaagttttctgtaaggtttt
aagtcactatatcatattgtggcaaataagggtaacttgacttttttctc
tctattggatgcctagctcttagccattttatgtctagctagactcagta
ctaccggataggatgcaaattaatttctgacatatggact

gaattcagaaatatctacagtcaaaggagcaaaccaactttgcaatgcaa
tgacatttcttttactgttagatataaaacaactctagcctactttgagt
tactaaaataagaagttacgatgctggttccatattactttcatatgtcc
tttcattttaaaaacttcaaaatactttgaatttttaacttaagagactc
aaaagtacgttcaatggggtgagagagataaaactcaattctactaacag
tttaactagattttgactgctgattgagacttactaatctgctctctata
atttacaagtagtatctggagtctagaaaatttttgtggctttaaaagtt
gtacataaaaatagctgagcgattcaactcatgtatttcacatgaaattc
caggtgtatctcactcctaagctattttacaactgtagtcgttgcagaaa
tatctatattccagcccccagctgctttccactctcctcccatctgaaca
atgctgctgtatttatagaaacaggtgatcttcagcctattctttgtcat
tggagccagcactcaacaacttctgtagtggcaaatggttttactagaat
gtttgatgacatgctccccttcccgttcttgtttctagtatataatactt
ctgttgagtaatcctattaccaaagatgactccatcatcttatttactgt
taagtccattgacattttgtggatgagtttatataagcagtaaatataat
ttcgaagaaatgaacataagagttgaagagatatatccgtgagcacaacc
actaattgctcaaaccgaagaacctgagtttgcaatcccaacacccatga
taaaacactgaaactgtagcattgaagtgtggaatcaggtggatcctggg
agctatctttacaggaaggccagtcaatatgatgagcttctgattcatgg
agagatccccttttaagggtctcagtcagaaagcaaaagaggagatgctt
aatgtcctcctttggtccctgtatgcaggcaccagagtatctacaatagt
gttgtgatatgaccactgaattggggttgattccatactgtagattctaa
agcgggtttaggaaagttgctcgaactaaggccaaagaaggttacatgtg
gaagctaagggaatgattgattacttaagaccattatatttgctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_23028970_23030180
seq2: B6Ng01-250M11.g_70_1264 (reverse)

seq1  CAGCAAATATAGTGTTCTTAAGTATATTCAATCATTTTCCCTTTTGCTTC  50
      ||||||||||| || |||||||  || |||||||||   || || |||| 
seq2  CAGCAAATATAATGGTCTTAAG--TAATCAATCATT---CCCTTAGCTT-  44

seq1  CCACATGGGTAAACTTCTTTGCCTATAGTTCTGAGCACTCTTCATAAAAC  100
      ||||||  |||| |||||||| |  |||||| |||||   ||| | ||||
seq2  CCACAT--GTAACCTTCTTTGGCCTTAGTTC-GAGCAACTTTCCT-AAAC  90

seq1  ACACTTTATAGAATTCTTACAGTATGGAATCAACCCCAATTCAGTGTTCA  150
       | |||  ||||||   ||||||||||||||||||||||||||||| |||
seq2  CCGCTT--TAGAAT--CTACAGTATGGAATCAACCCCAATTCAGTGGTCA  136

seq1  TATCACAACAACTATTGTAGATACTCTGGTGCCTGCATACAGGGACCAAA  200
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATCACAAC-ACTATTGTAGATACTCTGGTGCCTGCATACAGGGACCAAA  185

seq1  GGAGGACATTAAGCATCTTCCTCTTTTGCTTTCTGACTGAGACCCTTAAA  250
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGAGGACATTAAGCATC-TCCTCTTTTGCTTTCTGACTGAGACCCTTAAA  234

seq1  AGGGGATCTCTCCATGAATCAGAAGCTCATCATATTGACTGGCCTTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATCTCTCCATGAATCAGAAGCTCATCATATTGACTGGCCTTCCTG  284

seq1  TAAAGATAGCTCCCAGGATCCACCTGATTCCACACTTCAATGCTACAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATAGCTCCCAGGATCCACCTGATTCCACACTTCAATGCTACAGTT  334

seq1  TCAGTGTTTTATCATGGGTGTTGGGATTGCAAACTCAGGTTCTTCGGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTTTATCATGGGTGTTGGGATTGCAAACTCAGGTTCTTCGGTTT  384

seq1  GAGCAATTAGTGGTTGTGCTCACGGATATATCTCTTCAACTCTTATGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATTAGTGGTTGTGCTCACGGATATATCTCTTCAACTCTTATGTTC  434

seq1  ATTTCTTCGAAATTATATTTACTGCTTATATAAACTCATCCACAAAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCGAAATTATATTTACTGCTTATATAAACTCATCCACAAAATGT  484

seq1  CAATGGACTTAACAGTAAATAAGATGATGGAGTCATCTTTGGTAATAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGACTTAACAGTAAATAAGATGATGGAGTCATCTTTGGTAATAGGA  534

seq1  TTACTCAACAGAAGTATTATATACTAGAAACAAGAACGGGAAGGGGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAACAGAAGTATTATATACTAGAAACAAGAACGGGAAGGGGAGCA  584

seq1  TGTCATCAAACATTCTAGTAAAACCATTTGCCACTACAGAAGTTGTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATCAAACATTCTAGTAAAACCATTTGCCACTACAGAAGTTGTTGAG  634

seq1  TGCTGGCTCCAATGACAAAGAATAGGCTGAAGATCACCTGTTTCTATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCTCCAATGACAAAGAATAGGCTGAAGATCACCTGTTTCTATAAA  684

seq1  TACAGCAGCATTGTTCAGATGGGAGGAGAGTGGAAAGCAGCTGGGGGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCAGCATTGTTCAGATGGGAGGAGAGTGGAAAGCAGCTGGGGGCTG  734

seq1  GAATATAGATATTTCTGCAACGACTACAGTTGTAAAATAGCTTAGGAGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGATATTTCTGCAACGACTACAGTTGTAAAATAGCTTAGGAGTG  784

seq1  AGATACACCTGGAATTTCATGTGAAATACATGAGTTGAATCGCTCAGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACACCTGGAATTTCATGTGAAATACATGAGTTGAATCGCTCAGCTA  834

seq1  TTTTTATGTACAACTTTTAAAGCCACAAAAATTTTCTAGACTCCAGATAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATGTACAACTTTTAAAGCCACAAAAATTTTCTAGACTCCAGATAC  884

seq1  TACTTGTAAATTATAGAGAGCAGATTAGTAAGTCTCAATCAGCAGTCAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGTAAATTATAGAGAGCAGATTAGTAAGTCTCAATCAGCAGTCAAA  934

seq1  ATCTAGTTAAACTGTTAGTAGAATTGAGTTTTATCTCTCTCACCCCATTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTTAAACTGTTAGTAGAATTGAGTTTTATCTCTCTCACCCCATTG  984

seq1  AACGTACTTTTGAGTCTCTTAAGTTAAAAATTCAAAGTATTTTGAAGTTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTACTTTTGAGTCTCTTAAGTTAAAAATTCAAAGTATTTTGAAGTTT  1034

seq1  TTAAAATGAAAGGACATATGAAAGTAATATGGAACCAGCATCGTAACTTC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGAAAGGACATATGAAAGTAATATGGAACCAGCATCGTAACTTC  1084

seq1  TTATTTTAGTAACTCAAAGTAGGCTAGAGTTGTTTTATATCTAACAGTAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAGTAACTCAAAGTAGGCTAGAGTTGTTTTATATCTAACAGTAA  1134

seq1  AAGAAATGTCATTGCATTGCAAAGTTGGTTTGCTCCTTTGACTGTAGATA  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATGTCATTGCATTGCAAAGTTGGTTTGCTCCTTTGACTGTAGATA  1184

seq1  TTTCTGAATTC  1211
      |||||||||||
seq2  TTTCTGAATTC  1195


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