BAC Information

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BAC

Clone NameB6Ng01-255B05
Chromosome4 (Build37)
Map Location 5,166,193 - 5,167,352
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039297, LOC622019, Impad1, LOC100039338
Downstream gene1700012H17Rik, LOC669309, 3110003A22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255B05.bB6Ng01-255B05.g
ACCGA061373GA061374
length1,2301,175
definitionB6Ng01-255B05.b B6Ng01-255B05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctatttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattctgttagcgagaattttattaaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctatcttgtgaaaaagtttgtgcggaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactatttagaaggtcaacttgatcctgattcaactt
tagtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgtgttatgtctcccttttcagttctgattttgttaatt
aggattttgtccctgtgccctctagtgagtctatctaagggtttatctat
cctgttgattttctcaaagaaccagctcattttttggtttattctttgaa
tagttcttgtttccacttggttgatttcacccctgagtttgattatttcc
tgccgtctactcctcttgggtgactttgcttcctttttttctagagcttt
taggtgtgttgtcaagctgctagtatgtgctttctcccgtttcttcttgg
aggcactcagagctatgagtttccctcttagaaatgctttcattgtgtcc
taagtttgggtacgttttggcttcattttcatgaactctagagttcttat
ttctttcttttattcttctgaccaggtatcattgagaaagagtgttgttc
agtttcatgtgaatgttgctctattatttagttgtaatgagatcagcctt
aggtgcatggatctgtagatgtcatggacaattccaaatttttgattctc
gtgtatagagccctcgcattgttggtagca

gaattcaaataaaaaactcaaaatttcatgactatatctaagtatcattt
cattaaatataaactacatttcctgtagccatttttgctctgaatttatt
aaaaattaaaggcaataatctgcaaaaaccctgcctctttacatttgaaa
atgtaaagagtatttgatatttagtatctgaaggagaatggcacaaggca
caatttattacgtttaagtgttgaactggcaggtgtctgcccatatttct
taggctgagtggcagtccccttgtgtgacagcccccttgtgagtgcctgc
taagatcaagcacatgtaaggcttgtgacatccattggcacttatctcaa
tcttcctaatcatattttattgattaattggttggttggttgattgattc
acacataatttgagtcaggatgtggatgttttcttgcctggttgtgaatt
cattatgtatgtctactaatctgtcctggaacttgtaacaatcctcctgt
ctcagcctctgaaatgctgaaattacaggtataacacaccatgacctgct
tttgatttgattttggtgtgaaagaaattctctttctccaaactccagcc
atgtttctccatctcctgaggttatttaaattgttccttgccaaactgct
agcattcctattctcatataagtgggccactgcaatgagtacttgtcaat
aggtcaaaaaactgacttcagtaaaatggatcatattgatttcttttgtc
agcaagttttatctggttaaacttaaatgagtacatcttctgaattactg
caataaagtgaacacatactttaaacttttggtgatctcacagatctatt
cagtacacccaaatcaatatatttaatattttctcaaagtattcatgtta
aagtcagtatttttcctccgagacagcatgcacccctcagcatatggcat
cacagatacactgtttaggattaggctgccatgcagtaaatagttaccca
aatcaatcaagatagataccatcacttgcaatttattagttaggaggaaa
ataatgtcatacaggtggaaagctgggagcttcaagagatttcctcatgt
tgtttggcacctcaggcattcagaagaaactgaatgccgaaatctaaaaa
aaaaatacacacttggcataaggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_5166193_5167352
seq2: B6Ng01-255B05.g_66_1240 (reverse)

seq1  TGCCTTAT-CCAAGTGTG-ATTTTTTTTTTAGA-TTCTGCA-TCAG--TC  44
      |||||||| ||||||||| |||||||||||||| ||| ||| ||||  ||
seq2  TGCCTTATGCCAAGTGTGTATTTTTTTTTTAGATTTCGGCATTCAGTTTC  50

seq1  TTCTG-ATGGCTGA-GTG-CAAACAACATGAATGTATCT-TTGAGGCT-C  89
      ||||| ||| |||| ||| ||||||||||||    |||| |||| ||| |
seq2  TTCTGAATGCCTGAGGTGCCAAACAACATGAGGAAATCTCTTGAAGCTCC  100

seq1  CAGCTTTC--ACTGTATGACATTATTTTCCTC--TACT-ATAAATTGCAA  134
      ||||||||   |||||||||||||||||||||   ||| |||||||||||
seq2  CAGCTTTCCACCTGTATGACATTATTTTCCTCCTAACTAATAAATTGCAA  150

seq1  GTGATGGTATCTATCTTGATTGATTTGGGTAACTATTTACTGCATGGCAG  184
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGTATCTATCTTGATTGATTTGGGTAACTATTTACTGCATGGCAG  200

seq1  CCTAATCCTAAACAGTGTATCTGTGATGCCATATGCTGAGGGGTGCATGC  234
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAATCCTAAACAGTGTATCTGTGATGCCATATGCTGAGGGGTGCATGC  250

seq1  TGTCTCGGAGGAAAAATACTGACTTTAAACATGAATACTTTGAGAAAATA  284
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGTCTCGGAGGAAAAATACTGACTTT-AACATGAATACTTTGAGAAAATA  299

seq1  TTAAATATATTGATTTGGGTGTACTGAATAGATCTGTGAGATCACCAAAA  334
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATATTGATTTGGGTGTACTGAATAGATCTGTGAGATCACCAAAA  349

seq1  GTTTAAAGTATGTGTTCACTTTATTGCAGTAATTCAGAAGATGTACTCAT  384
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAAGTATGTGTTCACTTTATTGCAGTAATTCAGAAGATGTACTCAT  399

seq1  TTAAGTTTAACCAGATAAAACTTGCTGACAAAAGAAATCAATATGATCCA  434
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTTAACCAGATAAAACTTGCTGACAAAAGAAATCAATATGATCCA  449

seq1  TTTTACTGAAGTCAGTTTTTTGACCTATTGACAAGTACTCATTGCAGTGG  484
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTGAAGTCAGTTTTTTGACCTATTGACAAGTACTCATTGCAGTGG  499

seq1  CCCACTTATATGAGAATAGGAATGCTAGCAGTTTGGCAAGGAACAATTTA  534
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTATATGAGAATAGGAATGCTAGCAGTTTGGCAAGGAACAATTTA  549

seq1  AATAACCTCAGGAGATGGAGAAACATGGCTGGAGTTTGGAGAAAGAGAAT  584
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACCTCAGGAGATGGAGAAACATGGCTGGAGTTTGGAGAAAGAGAAT  599

seq1  TTCTTTCACACCAAAATCAAATCAAAAGCAGGTCATGGTGTGTTATACCT  634
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCACACCAAAATCAAATCAAAAGCAGGTCATGGTGTGTTATACCT  649

seq1  GTAATTTCAGCATTTCAGAGGCTGAGACAGGAGGATTGTTACAAGTTCCA  684
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTCAGCATTTCAGAGGCTGAGACAGGAGGATTGTTACAAGTTCCA  699

seq1  GGACAGATTAGTAGACATACATAATGAATTCACAACCAGGCAAGAAAACA  734
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAGATTAGTAGACATACATAATGAATTCACAACCAGGCAAGAAAACA  749

seq1  TCCACATCCTGACTCAAATTATGTGTGAATCAATCAACCAACCAACCAAT  784
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATCCTGACTCAAATTATGTGTGAATCAATCAACCAACCAACCAAT  799

seq1  TAATCAATAAAATATGATTAGGAAGATTGAGATAAGTGCCAATGGATGTC  834
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAATAAAATATGATTAGGAAGATTGAGATAAGTGCCAATGGATGTC  849

seq1  ACAAGCCTTACATGTGCTTGATCTTAGCAGGCACTCACAAGGGGGCTGTC  884
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCTTACATGTGCTTGATCTTAGCAGGCACTCACAAGGGGGCTGTC  899

seq1  ACACAAGGGGACTGCCACTCAGCCTAAGAAATATGGGCAGACACCTGCCA  934
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAGGGGACTGCCACTCAGCCTAAGAAATATGGGCAGACACCTGCCA  949

seq1  GTTCAACACTTAAACGTAATAAATTGTGCCTTGTGCCATTCTCCTTCAGA  984
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAACACTTAAACGTAATAAATTGTGCCTTGTGCCATTCTCCTTCAGA  999

seq1  TACTAAATATCAAATACTCTTTACATTTTCAAATGTAAAGAGGCAGGGTT  1034
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAATATCAAATACTCTTTACATTTTCAAATGTAAAGAGGCAGGGTT  1049

seq1  TTTGCAGATTATTGCCTTTAATTTTTAATAAATTCAGAGCAAAAATGGCT  1084
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGATTATTGCCTTTAATTTTTAATAAATTCAGAGCAAAAATGGCT  1099

seq1  ACAGGAAATGTAGTTTATATTTAATGAAATGATACTTAGATATAGTCATG  1134
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAATGTAGTTTATATTTAATGAAATGATACTTAGATATAGTCATG  1149

seq1  AAATTTTGAGTTTTTTATTTGAATTC  1160
      ||||||||||||||||||||||||||
seq2  AAATTTTGAGTTTTTTATTTGAATTC  1175


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