BAC Information

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BAC

Clone NameB6Ng01-257A07
Chromosome4 (Build37)
Map Location 89,898,542 - 89,899,737
singlet/doubletsinglet
Overlap genenone
Upstream geneCdkn2a, Cdkn2b, LOC664785, Dmrta1, Zfp352
Downstream geneLOC619842, LOC435792, Ppia-ps4_804.1, LOC664840, LOC664848, LOC100042274
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257A07.bB6Ng01-257A07.g
ACCGA062826GA062827
length1,192776
definitionB6Ng01-257A07.b B6Ng01-257A07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaagcttcctttttttcctacactttagaaataccatgccaa
cagagaattgagcctgtgctgcatttagtaataagaagacgtgtggcagc
tacaagtcctacgaatcactaatctgaatttgttgttgttgctgttgttt
gtttgtttgatttctttgagagagaaaaagtctcattatgtctccttctc
tgtcctggaactcactatgcagactaaactggccttgaactcacagagtt
ctgtctgtctgctgagtactatggtggaattaaaactatgtgtcactgtt
ggctttttgtctaggttgtcctccaggtacctggaaacagccaggtgtgc
ctgactaaatataaaagggtcccctcctcactcttttgctctttctctat
tctcatgttcttgcttcttaccccctctctccctactcccctccctcctc
tctctccacatgagcctgcagaggcaccctcttcccccacaccataccac
acctccactaaacatatttcttccttatcagtcaccacacctggccacta
atctagcacccctgaccactaatctgctttccttttaaaaggaaagcaga
gatatagtgacaaaagtagttctagcctgaatctaatttgtgtatgctga
agttttattatcaagttaaatgtaaaattataaacattttagaaaaagta
ggaaactattctgtgtctcagttcaggttcctgagtttgaaaccaaaaga
cataataaatttggtctcttcaaaaaaaattttttttctgcttgaaaatc
actgaaagttataaacaagttaccttcaaatcatattaacaaaccacatg
tctgacaaaggaagtgagaatctcaatattatgaaaaccaaacagtccag
ttgaagaactagatgtggagatatttcactggaaatatttagataaatag
acacaggaagaatattcagtgtgcttgcccattgcaaaccgtaaattaaa
ccacacttttgtatcatcaccacacatggccaaaaataaaaacaaaacag
caaacaatcccctgcccccactccaaaccttaaaggatctgctatgttct
tgggtgaatgcttccatttacatatttctggagggaggaaacacaatcgg
gaatgaactcccatcagaatgcttgtctggtggggactttct

gaattctttggaaagttggttgcatggtattttgctgggttaaacatgta
aaagaatgtttacctgaagtggacacaggtgaaagagtaaggcagattcc
taaaggagatttttgctgaaggagacacagtctgctaaaacaaagatgta
aaaggacaaatgatgctatctaaataaatgtattggtctacctacattgc
ttggttgagctgcatttgtcaggacgccataaagggaatcatgccaaaaa
ctcctgatgctgtgctgagtttcttgctgcttcaaggacatgggctgatt
ggaagagtcatatcagtggaaacagactaacttggggtgcaaagtcagac
tcacatgctgaagcaagacatgtagtggcgaggcaagacctgttgaggat
atgtgatatgtggagtgtgcaaatagtacttgatagagatcactagtttg
tctgcttctctgaggacaccacagtctgaaggcctcccaggagttgtgct
gcatgcagagcaacaggtaagggaccctcccaaacaaccacagcatctgg
gaacccagaggagtccagcagacttgggacccatcactccccaaccatgt
acaccttcatcccagatttcactccccttctggcctgtaccttgcatcag
atcagatcaccagcttgtatgccccttgaagaccccacagtctgaagacc
tttacaggaaagtctactaaagccagggccacagcctcctaggagagatg
gagcaacactagggatacatgactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_89898542_89899737
seq2: B6Ng01-257A07.b_45_1236

seq1  GAATTCAGGAAGCTTCCTTTTTTTCCTACACTTTAGAAATACCATGCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAGCTTCCTTTTTTTCCTACACTTTAGAAATACCATGCCAA  50

seq1  CAGAGAATTGAGCCTGTGCTGCATTTAGTAATAAGAAGACGTGTGGCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAATTGAGCCTGTGCTGCATTTAGTAATAAGAAGACGTGTGGCAGC  100

seq1  TACAAGTCCTACGAATCACTAATCTGAATTTGTTGTTGTTGCTGTTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGTCCTACGAATCACTAATCTGAATTTGTTGTTGTTGCTGTTGTTT  150

seq1  GTTTGTTTGATTTCTTTGAGAGAGAAAAAGTCTCATTATGTCTCCTTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGATTTCTTTGAGAGAGAAAAAGTCTCATTATGTCTCCTTCTC  200

seq1  TGTCCTGGAACTCACTATGCAGACTAAACTGGCCTTGAACTCACAGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGGAACTCACTATGCAGACTAAACTGGCCTTGAACTCACAGAGTT  250

seq1  CTGTCTGTCTGCTGAGTACTATGGTGGAATTAAAACTATGTGTCACTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTGTCTGCTGAGTACTATGGTGGAATTAAAACTATGTGTCACTGTT  300

seq1  GGCTTTTTGTCTAGGTTGTCCTCCAGGTACCTGGAAACAGCCAGGTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTTTGTCTAGGTTGTCCTCCAGGTACCTGGAAACAGCCAGGTGTGC  350

seq1  CTGACTAAATATAAAAGGGTCCCCTCCTCACTCTTTTGCTCTTTCTCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTAAATATAAAAGGGTCCCCTCCTCACTCTTTTGCTCTTTCTCTAT  400

seq1  TCTCATGTTCTTGCTTCTTACCCCCTCTCTCCCTACTCCCCTCCCTCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGTTCTTGCTTCTTACCCCCTCTCTCCCTACTCCCCTCCCTCCTC  450

seq1  TCTCTCCACATGAGCCTGCAGAGGCACCCTCTTCCCCCACACCATACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCACATGAGCCTGCAGAGGCACCCTCTTCCCCCACACCATACCAC  500

seq1  ACCTCCACTAAACATATTTCTTCCTTATCAGTCACCACACCTGGCCACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCACTAAACATATTTCTTCCTTATCAGTCACCACACCTGGCCACTA  550

seq1  ATCTAGCACCCCTGACCACTAATCTGCTTTCCTTTTAAAAGGAAAGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGCACCCCTGACCACTAATCTGCTTTCCTTTTAAAAGGAAAGCAGA  600

seq1  GATATAGTGACAAAAGTAGTTCTAGCCTGAATCTAATTTGTGTATGCTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGTGACAAAAGTAGTTCTAGCCTGAATCTAATTTGTGTATGCTGA  650

seq1  AGTTTTATTATCAAGTTAAATGTAAAATTATAAACATTTTAGAAAAAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTATTATCAAGTTAAATGTAAAATTATAAACATTTTAGAAAAAGTA  700

seq1  GGAAACTATTCTGTGTCTCAGTTCAGGTTCCTGAGTTTGAAACCAAAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTATTCTGTGTCTCAGTTCAGGTTCCTGAGTTTGAAACCAAAAGA  750

seq1  CATAATAAATTTGGTCTCTTCAAAAAAAATTTTTTTTCTGCTTGAAAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATAAATTTGGTCTCTTCAAAAAAAATTTTTTTTCTGCTTGAAAATC  800

seq1  ACTGAAAGTTATAAACAAGTTACCTTCAAATCATATTAACAAACCACATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAGTTATAAACAAGTTACCTTCAAATCATATTAACAAACCACATG  850

seq1  TCTGACAAAGGAAGTGAGAATCTCAATATTATGAAAACCAAACAGTCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACAAAGGAAGTGAGAATCTCAATATTATGAAAACCAAACAGTCCAG  900

seq1  TTGAAGAACTAGATGTGGAGATATTTCACTGGAAATATTTAGATAAAATA  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGAAGAACTAGATGTGGAGATATTTCACTGGAAATATTTAGAT-AAATA  949

seq1  GACACAGGAAGAATATTCAGTGTGCTTGCCCATTGCAAAACCGTAAATTA  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  GACACAGGAAGAATATTCAGTGTGCTTGCCCATTGC-AAACCGTAAATT-  997

seq1  AAACCACACTTATGTATCATCA-CACACAATGGCAAAAATAAAAACAAAA  1049
      ||||||||||| |||||||||| ||||||  | |||||||||||||||||
seq2  AAACCACACTTTTGTATCATCACCACACATGGCCAAAAATAAAAACAAAA  1047

seq1  CAAGCAAACAATCCCCTGCCCCCAACTCCAAACCCTAAAGGATCTGCTAT  1099
      | ||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  C-AGCAAACAATCCCCTGCCCCC-ACTCCAAACCTTAAAGGATCTGCTAT  1095

seq1  GTTC-TGGGTG-ATGCTCCATTTTACATA-TTCTGGA-GGAGGAAACAAC  1145
      |||| |||||| ||||| |  |||||||| ||||||| ||||||||| ||
seq2  GTTCTTGGGTGAATGCTTCCATTTACATATTTCTGGAGGGAGGAAAC-AC  1144

seq1  AATCGAGAAATTGACT-CCATCAGATAGGCTTGGTCT-GTGGGGACATTT  1193
      ||||| | |||  ||| |||||||| | |||| |||| ||||||||  ||
seq2  AATCG-GGAATGAACTCCCATCAGA-ATGCTT-GTCTGGTGGGGAC--TT  1189

seq1  TCT  1196
      |||
seq2  TCT  1192


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