BAC Information

Click to search

BAC

Clone NameB6Ng01-258B24
Chromosome4 (Build37)
Map Location 30,710,657 - 30,711,775
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665185, LOC619906
Downstream geneLOC100040864, LOC100040891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258B24.bB6Ng01-258B24.g
ACCGA063645GA063646
length1,1791,102
definitionB6Ng01-258B24.b B6Ng01-258B24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacacctgtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactgataagaaggacatatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccactccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccagggcctagcaaac
acagaagtggatgcccacagtcagctaatggatgggtcacagggctccca
atggagagctagagaaagtacccaaggagctaagggatctgcaccctata
gtggatcaacattatgactacagtaccccggagctcttgactctagctgc
atatgtatcaaaggatgctagtcgccatcactgaagagaggccatgacca
ccaacctttatatggccaaacaggaatgcacgctaagggatgggcaggta
gggggaatgtggaatggttctatacgtcc
gaattcctctgttgactaaggacttcacataaggatgaataaaggctctc
agttctccaacagtgccttctgccccataaactatggctatctgagtatc
tgtgggggacactgattattttcaagttaattacactgccatgaattcta
aagcttactcatatttcttattcttctgtttttaatcccacttttaaagt
gtttcatgcagtatgactcgtttggagaaagctcttataacatccaaata
aaataactttctgcttaatgtagaaaacattcatttatttcttgaaagtt
tccaaaagctttactgttccaacatttcccaaatgtccaagtccaaagtc
tccacagacattagcatgcaactcacaaagccctgagaagaaagtgagga
agaagtaacatgcttcttagacacagcggcaatgaaggcatgaggtgtgc
attcccattccaagaagaagaaataagaaaataggaaagaagttaacccc
aaagcaagaccaaaacttgggcacaaagatgaaatagtaaagttctatgc
agcacatgagggacactgtaacagaagccaatggcttccatgtaatatga
gcacagcataccattgtctgggcagcctctgtttttgaaatgtgttacag
atctttattctttcattgcagctttggctaaagacccagagctctggtgt
gtgtagcacaatgggggccaacttgcgcacactcatgtctgtacaacata
tgtcaagcctactaggtttttatttgtttgggatttcttatttgtttgtt
tttgaaatcacagtgaatggtactagggccctatgattttcgtattctgc
atttctgcaaaacaatcatcacatggaatccaaatctaacattgatgtga
gacacctgggatttggcttgaatgatcgtttcagagcctcagaatgtcct
gttgtcacgagtaacaaagtaacaccattctgaattctgatacaggcttt
ttttttccccagaaactaatcaattctggaagttagcaaccaaattgtgt
cttacttggatcaattattggggtggagtgaccctaaagttccaggagtc
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_30710657_30711775
seq2: B6Ng01-258B24.g_69_1170 (reverse)

seq1  AAGACATCCTGGAAACTTTTAGGGTCACTCCACCCCAATTATTTGATCAA  50
      ||||| ||||||||   ||||||||||||||||||||| || |||||| |
seq2  AAGAC-TCCTGGAA--CTTTAGGGTCACTCCACCCCAA-TAATTGATCCA  46

seq1  AGGTAAAGGAACACAAATTTGTTTCTAAACTTTCCAGGAAATGAATAGTT  100
      | ||||    |||||| || ||| ||||   ||||| ||| ||| |||||
seq2  A-GTAA---GACACAATTTGGTTGCTAA--CTTCCA-GAATTGATTAGTT  89

seq1  TCTTGGGGAAAAAAAAAGCCCTGTATTCAGAATTTCAGAATGGTGTTACT  150
      || ||||||||||||||| |||||| |||||| |||||||||||||||||
seq2  TC-TGGGGAAAAAAAAAG-CCTGTA-TCAGAA-TTCAGAATGGTGTTACT  135

seq1  TTGTTACTCGTGAACAACAGGACATTCTGAGGCTTCTGAAACGATCATTC  200
      |||||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  TTGTTACTCGTG-ACAACAGGACATTCTGAGGC-TCTGAAACGATCATTC  183

seq1  AAGCCAAAT-CCAGGTGTCTCACATCAATGTTAGATTTTGGATTCCATGT  249
      ||||||||| ||||||||||||||||||||||||| ||||||||||||||
seq2  AAGCCAAATCCCAGGTGTCTCACATCAATGTTAGA-TTTGGATTCCATGT  232

seq1  GATGATTGTTTTGCAGAAATGCAGAATACGAAAATCATAGGGCCCTAGTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTGTTTTGCAGAAATGCAGAATACGAAAATCATAGGGCCCTAGTA  282

seq1  CCATTCACTGTGATTTCAAAAACAAACAAATAAGAAATCCCAAACAAATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCACTGTGATTTCAAAAACAAACAAATAAGAAATCCCAAACAAATA  332

seq1  AAAACCTAGTAGGCTTGACATATGTTGTACAGACATGAGTGTGCGCAAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTAGTAGGCTTGACATATGTTGTACAGACATGAGTGTGCGCAAGT  382

seq1  TGGCCCCCATTGTGCTACACACACCAGAGCTCTGGGTCTTTAGCCAAAGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCCATTGTGCTACACACACCAGAGCTCTGGGTCTTTAGCCAAAGC  432

seq1  TGCAATGAAAGAATAAAGATCTGTAACACATTTCAAAAACAGAGGCTGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGAAAGAATAAAGATCTGTAACACATTTCAAAAACAGAGGCTGCC  482

seq1  CAGACAATGGTATGCTGTGCTCATATTACATGGAAGCCATTGGCTTCTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAATGGTATGCTGTGCTCATATTACATGGAAGCCATTGGCTTCTGT  532

seq1  TACAGTGTCCCTCATGTGCTGCATAGAACTTTACTATTTCATCTTTGTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGTCCCTCATGTGCTGCATAGAACTTTACTATTTCATCTTTGTGC  582

seq1  CCAAGTTTTGGTCTTGCTTTGGGGTTAACTTCTTTCCTATTTTCTTATTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTTTGGTCTTGCTTTGGGGTTAACTTCTTTCCTATTTTCTTATTT  632

seq1  CTTCTTCTTGGAATGGGAATGCACACCTCATGCCTTCATTGCCGCTGTGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTGGAATGGGAATGCACACCTCATGCCTTCATTGCCGCTGTGT  682

seq1  CTAAGAAGCATGTTACTTCTTCCTCACTTTCTTCTCAGGGCTTTGTGAGT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGAAGCATGTTACTTCTTCCTCACTTTCTTCTCAGGGCTTTGTGAGT  732

seq1  TGCATGCTAATGTCTGTGGAGACTTTGGACTTGGACATTTGGGAAATGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCTAATGTCTGTGGAGACTTTGGACTTGGACATTTGGGAAATGTT  782

seq1  GGAACAGTAAAGCTTTTGGAAACTTTCAAGAAATAAATGAATGTTTTCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGTAAAGCTTTTGGAAACTTTCAAGAAATAAATGAATGTTTTCTA  832

seq1  CATTAAGCAGAAAGTTATTTTATTTGGATGTTATAAGAGCTTTCTCCAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGCAGAAAGTTATTTTATTTGGATGTTATAAGAGCTTTCTCCAAA  882

seq1  CGAGTCATACTGCATGAAACACTTTAAAAGTGGGATTAAAAACAGAAGAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTCATACTGCATGAAACACTTTAAAAGTGGGATTAAAAACAGAAGAA  932

seq1  TAAGAAATATGAGTAAGCTTTAGAATTCATGGCAGTGTAATTAACTTGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATATGAGTAAGCTTTAGAATTCATGGCAGTGTAATTAACTTGAA  982

seq1  AATAATCAGTGTCCCCCACAGATACTCAGATAGCCATAGTTTATGGGGCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCAGTGTCCCCCACAGATACTCAGATAGCCATAGTTTATGGGGCA  1032

seq1  GAAGGCACTGTTGGAGAACTGAGAGCCTTTATTCATCCTTATGTGAAGTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCACTGTTGGAGAACTGAGAGCCTTTATTCATCCTTATGTGAAGTC  1082

seq1  CTTAGTCAACAGAGGAATTC  1119
      ||||||||||||||||||||
seq2  CTTAGTCAACAGAGGAATTC  1102